Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3003

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,598,232	-		Psyr_3002	0.46	+0.9
3,598,329	+		Psyr_3002	0.55	-1.3
3,598,329	+		Psyr_3002	0.55	+3.9
3,598,329	+		Psyr_3002	0.55	-2.3
3,598,329	+		Psyr_3002	0.55	-3.6
3,598,329	+		Psyr_3002	0.55	+3.0
3,598,330	-		Psyr_3002	0.55	-2.8
3,598,330	-		Psyr_3002	0.55	+4.5
3,598,330	-		Psyr_3002	0.55	-1.6
3,598,330	-		Psyr_3002	0.55	-2.8
3,598,400	-		Psyr_3002	0.62	-0.3
3,598,575	-		Psyr_3002	0.79	-2.7
3,598,791	+				-0.3
3,598,791	+				-3.9
3,598,791	+				-5.4
3,598,791	+				-3.9
3,598,792	-				-1.2
3,598,792	-				+0.7
3,598,792	-				+2.5
3,598,792	-				+3.7
3,598,894	+				-3.1
3,598,894	+				+2.2
3,598,894	+				-2.9
3,598,894	+				-2.0
3,598,894	+				-4.2
3,598,895	-				-0.1
3,598,895	-				-2.2
3,598,895	-				+3.2
3,598,915	+				-0.3
3,598,915	+				+2.5
3,598,915	+				-2.9
3,598,916	-				+1.2
3,598,966	+				-1.7
3,599,009	+				+2.5
3,599,010	-				+2.2
3,599,035	+				+1.2
3,599,055	+				-2.8
3,599,055	+				-1.1
3,599,148	-				+2.0
3,599,148	-				-1.3
3,599,201	+				+10.6
3,599,201	+				+5.7
3,599,201	+				+10.1
3,599,201	+				+5.5
3,599,201	+				+6.2
3,599,201	+				+3.4
3,599,202	-				+6.7
3,599,202	-				+8.6
3,599,202	-				+6.0
3,599,246	+		Psyr_3003	0.12	+9.3
3,599,247	-		Psyr_3003	0.12	+10.1
3,599,247	-		Psyr_3003	0.12	+9.1
3,599,329	+		Psyr_3003	0.26	+8.7
3,599,330	-		Psyr_3003	0.26	+2.8
3,599,495	+		Psyr_3003	0.53	+10.0
3,599,495	+		Psyr_3003	0.53	+5.2
3,599,495	+		Psyr_3003	0.53	+9.2
3,599,495	+		Psyr_3003	0.53	+5.2
3,599,495	+		Psyr_3003	0.53	+4.3
3,599,495	+		Psyr_3003	0.53	+6.6
3,599,495	+		Psyr_3003	0.53	+8.2
3,599,495	+		Psyr_3003	0.53	+10.1
3,599,496	-		Psyr_3003	0.53	+5.6
3,599,496	-		Psyr_3003	0.53	+10.4
3,599,496	-		Psyr_3003	0.53	+8.7
3,599,496	-		Psyr_3003	0.53	+4.9
3,599,496	-		Psyr_3003	0.53	+10.2
3,599,496	-		Psyr_3003	0.53	+9.4
3,599,699	+		Psyr_3003	0.86	+4.8
3,599,699	+		Psyr_3003	0.86	+5.0
3,599,699	+		Psyr_3003	0.86	+8.2
3,599,773	+				+7.0
3,599,773	+				+1.8
3,599,773	+				+2.2
3,599,773	+				+6.9
3,599,773	+				+8.5
3,599,773	+				+3.9
3,599,774	-				+5.3
3,599,774	-				+2.1
3,599,774	-				+6.6
3,599,774	-				+10.0
3,599,774	-				+6.5
3,599,774	-				+2.6
3,599,781	+				+5.5
3,599,786	+				+7.4
3,599,786	+				+4.0
3,599,786	+				+5.5
3,599,786	+				+3.2
3,599,787	-				+0.7
3,599,787	-				-1.8
3,599,787	-				-1.1
3,599,787	-				-0.6
3,599,850	-				-1.5
3,599,900	-				-1.8
3,600,171	+		Psyr_3004	0.33	+3.2
3,600,172	-		Psyr_3004	0.33	+0.6
3,600,435	-		Psyr_3004	0.60	-1.5
3,600,619	+		Psyr_3004	0.79	-1.4
3,600,619	+		Psyr_3004	0.79	-5.5
3,600,622	+		Psyr_3004	0.80	-0.2
3,600,622	+		Psyr_3004	0.80	-1.4
3,600,622	+		Psyr_3004	0.80	-0.2