Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2902

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,479,325	+		Psyr_2900	0.70	-1.0
3,479,325	+		Psyr_2900	0.70	+2.2
3,479,373	-		Psyr_2900	0.75	+2.4
3,479,643	+				+1.1
3,479,644	-				+1.2
3,479,732	+				-3.6
3,480,059	+				-1.6
3,480,059	+				-0.4
3,480,059	+				+2.5
3,480,060	-				+2.2
3,480,137	+				-1.3
3,480,385	+				-3.8
3,480,512	-		Psyr_2902	0.14	-5.1
3,480,556	+		Psyr_2902	0.17	+4.5
3,480,673	+		Psyr_2902	0.23	-0.7
3,480,673	+		Psyr_2902	0.23	-0.8
3,480,674	-		Psyr_2902	0.23	-1.4
3,480,674	-		Psyr_2902	0.23	-3.4
3,480,674	-		Psyr_2902	0.23	-3.6
3,480,674	-				+0.2
3,480,679	+		Psyr_2902	0.23	-0.8
3,480,679	+		Psyr_2902	0.23	+0.5
3,480,679	+		Psyr_2902	0.23	+3.3
3,480,680	-		Psyr_2902	0.23	-2.8
3,480,680	-		Psyr_2902	0.23	-0.9
3,481,000	+		Psyr_2902	0.40	-0.8
3,481,000	+		Psyr_2902	0.40	+0.6
3,481,000	+		Psyr_2902	0.40	-3.7
3,481,000	+		Psyr_2902	0.40	+2.4
3,481,000	+		Psyr_2902	0.40	+1.2
3,481,001	-		Psyr_2902	0.41	+0.0
3,481,002	+		Psyr_2902	0.41	-4.2
3,481,003	-		Psyr_2902	0.41	-5.6
3,481,027	+		Psyr_2902	0.42	+0.8
3,481,053	+		Psyr_2902	0.43	-3.8
3,481,053	+		Psyr_2902	0.43	+0.8
3,481,053	+		Psyr_2902	0.43	-0.8
3,481,054	-		Psyr_2902	0.43	+2.9
3,481,081	+		Psyr_2902	0.45	-4.5
3,481,081	+		Psyr_2902	0.45	-2.0
3,481,120	+		Psyr_2902	0.47	-4.4
3,481,306	+		Psyr_2902	0.57	-3.3
3,481,306	+		Psyr_2902	0.57	+1.8
3,481,306	+		Psyr_2902	0.57	-1.5
3,481,306	+		Psyr_2902	0.57	+0.2
3,481,306	+		Psyr_2902	0.57	-0.8
3,481,306	+		Psyr_2902	0.57	-0.8
3,481,307	-		Psyr_2902	0.57	+0.8
3,481,307	-		Psyr_2902	0.57	-5.4
3,481,307	-		Psyr_2902	0.57	+4.0
3,481,307	-		Psyr_2902	0.57	+1.2
3,481,307	-		Psyr_2902	0.57	+3.9
3,481,419	-		Psyr_2902	0.63	-2.4
3,481,463	+		Psyr_2902	0.65	-0.8
3,481,613	-		Psyr_2902	0.73	-4.9
3,481,756	+		Psyr_2902	0.81	-1.3
3,481,757	-		Psyr_2902	0.81	-2.3
3,481,804	+		Psyr_2902	0.83	-1.7
3,481,804	+		Psyr_2902	0.83	+2.2
3,481,804	+		Psyr_2902	0.83	-0.6
3,481,804	+		Psyr_2902	0.83	-1.4
3,481,805	-		Psyr_2902	0.84	+2.2
3,481,805	-		Psyr_2902	0.84	+0.2
3,481,805	-		Psyr_2902	0.84	-2.5
3,481,805	-		Psyr_2902	0.84	+3.2
3,481,805	-		Psyr_2902	0.84	-2.4
3,481,805	-		Psyr_2902	0.84	+1.5
3,481,805	-		Psyr_2902	0.84	+2.0
3,481,885	+		Psyr_2902	0.88	-0.9
3,481,886	-		Psyr_2902	0.88	+2.9
3,481,921	+		Psyr_2902	0.90	-3.2
3,481,921	+		Psyr_2902	0.90	-0.5
3,481,921	+		Psyr_2902	0.90	-0.8
3,481,922	-		Psyr_2902	0.90	-0.7
3,481,922	-		Psyr_2902	0.90	+2.5
3,481,922	-		Psyr_2902	0.90	+3.1
3,481,939	+				+2.7
3,481,939	+				+0.8
3,481,939	+				-2.8
3,481,939	+				+3.2
3,481,939	+				+0.8
3,481,940	-				+1.2
3,481,940	-				+1.5
3,481,940	-				+0.4
3,481,940	-				+2.0
3,482,122	+				+2.0
3,482,123	-				+2.4
3,482,124	+				+3.7
3,482,404	+		Psyr_2903	0.27	-1.1
3,482,404	+		Psyr_2903	0.27	-3.1
3,482,405	-		Psyr_2903	0.27	-2.2
3,482,405	-		Psyr_2903	0.27	-0.9
3,482,518	+		Psyr_2903	0.38	+0.9
3,482,518	+		Psyr_2903	0.38	-2.8
3,482,518	+		Psyr_2903	0.38	-1.5
3,482,519	-		Psyr_2903	0.38	+3.8
3,482,746	+		Psyr_2903	0.59	-0.9
3,482,747	-		Psyr_2903	0.60	+2.0
3,482,852	-		Psyr_2903	0.69	-1.7
3,482,900	-		Psyr_2903	0.74	-0.5
3,483,031	+		Psyr_2903	0.86	+0.8
3,483,031	+				+1.2
3,483,031	+		Psyr_2903	0.86	+1.2
3,483,031	+		Psyr_2903	0.86	+0.4
3,483,032	-		Psyr_2903	0.86	-0.8
3,483,108	-				-2.8