Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2883

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,458,086	-		Psyr_2882	0.50	+0.2
3,458,086	-		Psyr_2882	0.50	-4.1
3,458,209	+		Psyr_2882	0.60	+0.6
3,458,210	-		Psyr_2882	0.60	+0.8
3,458,347	+		Psyr_2882	0.72	-0.8
3,458,386	+		Psyr_2882	0.75	-2.2
3,458,386	+		Psyr_2882	0.75	+2.2
3,458,386	+		Psyr_2882	0.75	-1.6
3,458,387	-		Psyr_2882	0.75	+1.8
3,458,387	-		Psyr_2882	0.75	+3.3
3,458,596	+				-1.2
3,458,596	+				-0.8
3,458,596	+				-1.0
3,458,596	+				+2.4
3,458,596	+				-5.5
3,458,596	+				+3.2
3,458,597	-				+2.4
3,458,597	-				-0.8
3,458,630	-				-2.4
3,458,676	+				-1.2
3,458,695	-				-2.4
3,458,695	-				-1.6
3,458,733	+				+3.2
3,458,734	-				-2.4
3,458,734	-				+2.5
3,458,817	+				-0.8
3,458,817	+				-2.8
3,458,818	-				+0.2
3,458,818	-				-1.8
3,458,844	-				-1.4
3,458,863	+				+0.8
3,458,864	-				-1.0
3,458,864	-				+1.5
3,459,012	-		Psyr_2883	0.12	-1.6
3,459,142	+		Psyr_2883	0.22	-2.9
3,459,145	+		Psyr_2883	0.22	-3.5
3,459,145	+		Psyr_2883	0.22	+0.8
3,459,145	+		Psyr_2883	0.22	-0.8
3,459,145	+		Psyr_2883	0.22	-0.8
3,459,145	+		Psyr_2883	0.22	-2.1
3,459,145	+		Psyr_2883	0.22	-3.1
3,459,146	-		Psyr_2883	0.22	-1.6
3,459,146	-		Psyr_2883	0.22	+2.9
3,459,146	-		Psyr_2883	0.22	+2.6
3,459,146	-		Psyr_2883	0.22	+2.8
3,459,146	-		Psyr_2883	0.22	+3.2
3,459,406	+		Psyr_2883	0.42	-0.8
3,459,407	-		Psyr_2883	0.42	+2.4
3,459,407	-		Psyr_2883	0.42	-0.2
3,459,407	-		Psyr_2883	0.42	+1.2
3,459,407	-		Psyr_2883	0.42	+0.7
3,459,407	-		Psyr_2883	0.42	+2.8
3,459,407	-		Psyr_2883	0.42	-0.8
3,459,407	-		Psyr_2883	0.42	-1.1
3,459,546	-		Psyr_2883	0.52	-1.6
3,459,580	+		Psyr_2883	0.55	-2.1
3,459,581	-		Psyr_2883	0.55	-0.8
3,459,581	-		Psyr_2883	0.55	-1.2
3,459,820	+		Psyr_2883	0.73	+1.5
3,459,820	+		Psyr_2883	0.73	-3.8
3,459,820	+		Psyr_2883	0.73	-4.8
3,459,820	+		Psyr_2883	0.73	-1.9
3,460,161	+				-0.2
3,460,165	+				+2.2
3,460,291	+				-0.8
3,460,291	+				-0.5
3,460,291	+				-3.2
3,460,291	+				-1.0
3,460,291	+				+1.2
3,460,291	+				-0.3
3,460,291	+				-5.0
3,460,292	-				+2.4
3,460,292	-				-0.8
3,460,292	-				+3.2
3,460,292	-				-3.0
3,460,292	-				+3.2
3,460,307	-				+0.2
3,460,324	+				-1.6
3,460,324	+				-0.8
3,460,324	+				-1.6
3,460,445	+		Psyr_2884	0.14	-2.0
3,460,445	+		Psyr_2884	0.14	-1.3
3,460,445	+		Psyr_2884	0.14	+0.2
3,460,445	+		Psyr_2884	0.14	-4.3
3,460,446	-		Psyr_2884	0.14	-1.1
3,460,446	-		Psyr_2884	0.14	+0.8
3,460,643	+		Psyr_2884	0.34	-1.5
3,460,643	+		Psyr_2884	0.34	+2.0
3,460,644	-		Psyr_2884	0.34	+1.6
3,460,679	+		Psyr_2884	0.37	-3.4
3,460,680	-		Psyr_2884	0.37	-0.9
3,460,680	-		Psyr_2884	0.37	+2.4
3,460,754	+		Psyr_2884	0.45	-0.3
3,460,754	+		Psyr_2884	0.45	-1.2
3,460,754	+		Psyr_2884	0.45	+3.0
3,460,755	-		Psyr_2884	0.45	+0.2
3,460,755	-		Psyr_2884	0.45	+0.0
3,460,755	-		Psyr_2884	0.45	+0.5
3,460,755	-		Psyr_2884	0.45	-5.0
3,460,931	-		Psyr_2884	0.62	+0.4
3,460,931	-		Psyr_2884	0.62	+1.2
3,460,933	+		Psyr_2884	0.62	-1.0
3,461,029	+		Psyr_2884	0.72	-0.5
3,461,099	+		Psyr_2884	0.79	+3.1
3,461,100	-		Psyr_2884	0.79	-0.8