Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2845 and Psyr_2846 are separated by 296 nucleotides Psyr_2846 and Psyr_2847 are separated by 329 nucleotides Psyr_2847 and Psyr_2848 are separated by 132 nucleotides
Psyr_2845: Psyr_2845 - hypothetical protein, at 3,418,796 to 3,419,257
_2845
Psyr_2846: Psyr_2846 - Phage integrase:Phage integrase, N-terminal SAM-like protein, at 3,419,554 to 3,420,588
_2846
Psyr_2847: Psyr_2847 - hypothetical protein, at 3,420,918 to 3,421,364
_2847
Psyr_2848: Psyr_2848 - hypothetical protein, at 3,421,497 to 3,421,922
_2848
Position (kb)
3419
3420
3421 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.591 kb on + strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.592 kb on - strand at 3418.631 kb on + strand at 3418.631 kb on + strand at 3418.631 kb on + strand at 3418.827 kb on - strand at 3419.333 kb on + strand at 3419.333 kb on + strand at 3419.333 kb on + strand at 3419.337 kb on + strand at 3419.337 kb on + strand at 3419.337 kb on + strand at 3419.372 kb on + strand at 3419.372 kb on + strand at 3419.372 kb on + strand at 3419.372 kb on + strand at 3419.373 kb on - strand at 3419.373 kb on - strand at 3419.373 kb on - strand at 3419.373 kb on - strand at 3419.412 kb on - strand at 3419.412 kb on - strand at 3419.626 kb on + strand at 3419.626 kb on + strand at 3419.626 kb on + strand at 3419.629 kb on + strand at 3419.629 kb on + strand at 3419.629 kb on + strand at 3419.629 kb on + strand at 3419.629 kb on + strand at 3419.629 kb on + strand at 3419.632 kb on + strand at 3419.632 kb on + strand at 3419.632 kb on + strand at 3419.632 kb on + strand at 3419.635 kb on + strand at 3419.635 kb on + strand at 3419.635 kb on + strand at 3419.635 kb on + strand at 3419.635 kb on + strand at 3419.635 kb on + strand at 3419.635 kb on + strand at 3419.684 kb on - strand, within Psyr_2846 at 3419.767 kb on + strand, within Psyr_2846 at 3419.767 kb on + strand, within Psyr_2846 at 3419.767 kb on + strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.783 kb on - strand, within Psyr_2846 at 3419.948 kb on + strand, within Psyr_2846 at 3419.948 kb on + strand, within Psyr_2846 at 3419.982 kb on + strand, within Psyr_2846 at 3419.983 kb on - strand, within Psyr_2846 at 3419.983 kb on - strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.073 kb on + strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.074 kb on - strand, within Psyr_2846 at 3420.103 kb on + strand, within Psyr_2846 at 3420.103 kb on + strand, within Psyr_2846 at 3420.143 kb on + strand, within Psyr_2846 at 3420.143 kb on + strand, within Psyr_2846 at 3420.143 kb on + strand, within Psyr_2846 at 3420.143 kb on + strand, within Psyr_2846 at 3420.143 kb on + strand, within Psyr_2846 at 3420.144 kb on - strand, within Psyr_2846 at 3420.144 kb on - strand, within Psyr_2846 at 3420.144 kb on - strand, within Psyr_2846 at 3420.144 kb on - strand, within Psyr_2846 at 3420.144 kb on - strand, within Psyr_2846 at 3420.148 kb on + strand, within Psyr_2846 at 3420.148 kb on + strand, within Psyr_2846 at 3420.148 kb on + strand, within Psyr_2846 at 3420.148 kb on + strand, within Psyr_2846 at 3420.148 kb on + strand, within Psyr_2846 at 3420.149 kb on - strand, within Psyr_2846 at 3420.201 kb on - strand, within Psyr_2846 at 3420.201 kb on - strand, within Psyr_2846 at 3420.201 kb on - strand at 3420.373 kb on - strand, within Psyr_2846 at 3420.373 kb on - strand, within Psyr_2846 at 3420.373 kb on - strand, within Psyr_2846 at 3420.373 kb on - strand, within Psyr_2846 at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.765 kb on + strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.766 kb on - strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.767 kb on + strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.768 kb on - strand at 3420.769 kb on + strand at 3420.769 kb on + strand at 3420.769 kb on + strand at 3420.769 kb on + strand at 3420.769 kb on + strand at 3420.769 kb on + strand at 3420.770 kb on - strand at 3420.770 kb on - strand at 3420.770 kb on - strand at 3420.770 kb on - strand at 3420.770 kb on - strand at 3421.001 kb on + strand, within Psyr_2847 at 3421.132 kb on - strand, within Psyr_2847 at 3421.205 kb on - strand, within Psyr_2847 at 3421.280 kb on + strand, within Psyr_2847 at 3421.281 kb on - strand, within Psyr_2847 at 3421.323 kb on + strand at 3421.323 kb on + strand at 3421.323 kb on + strand at 3421.324 kb on - strand at 3421.324 kb on - strand at 3421.397 kb on + strand at 3421.397 kb on + strand at 3421.397 kb on + strand at 3421.397 kb on + strand at 3421.398 kb on - strand at 3421.398 kb on - strand at 3421.398 kb on - strand at 3421.398 kb on - strand at 3421.398 kb on - strand at 3421.398 kb on - strand at 3421.408 kb on + strand at 3421.408 kb on + strand at 3421.409 kb on - strand at 3421.409 kb on - strand at 3421.409 kb on - strand at 3421.410 kb on + strand at 3421.410 kb on + strand at 3421.411 kb on - strand at 3421.411 kb on - strand at 3421.411 kb on - strand at 3421.411 kb on - strand at 3421.411 kb on - strand at 3421.411 kb on - strand at 3421.418 kb on - strand at 3421.418 kb on - strand at 3421.433 kb on + strand at 3421.434 kb on - strand at 3421.438 kb on + strand at 3421.442 kb on + strand at 3421.443 kb on - strand at 3421.469 kb on + strand at 3421.469 kb on + strand at 3421.469 kb on + strand at 3421.470 kb on - strand at 3421.470 kb on - strand at 3421.533 kb on + strand at 3421.557 kb on + strand, within Psyr_2848 at 3421.558 kb on - strand, within Psyr_2848 at 3421.558 kb on - strand, within Psyr_2848
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 3,418,591 + +3.4 3,418,591 + -1.0 3,418,591 + +1.3 3,418,591 + +0.6 3,418,591 + +3.5 3,418,591 + +1.1 3,418,591 + +0.2 3,418,591 + +1.1 3,418,591 + +1.2 3,418,591 + +0.5 3,418,592 - +3.6 3,418,592 - +5.2 3,418,592 - +2.2 3,418,592 - +2.5 3,418,592 - -1.1 3,418,592 - +0.8 3,418,592 - -2.5 3,418,592 - +4.7 3,418,592 - -0.3 3,418,592 - +0.6 3,418,592 - -0.7 3,418,631 + +4.8 3,418,631 + -0.6 3,418,631 + +0.4 3,418,827 - +3.2 3,419,333 + +0.3 3,419,333 + +4.9 3,419,333 + -0.4 3,419,337 + +3.3 3,419,337 + +0.3 3,419,337 + +0.8 3,419,372 + +0.3 3,419,372 + +2.8 3,419,372 + +0.2 3,419,372 + +2.5 3,419,373 - +0.3 3,419,373 - -0.2 3,419,373 - +2.7 3,419,373 - -0.5 3,419,412 - -0.2 3,419,412 - +3.0 3,419,626 + +2.4 3,419,626 + +3.8 3,419,626 + +2.4 3,419,629 + +0.8 3,419,629 + -0.1 3,419,629 + +0.5 3,419,629 + +5.0 3,419,629 + +0.0 3,419,629 + +4.1 3,419,632 + +4.5 3,419,632 + -0.8 3,419,632 + -1.9 3,419,632 + +0.2 3,419,635 + +0.2 3,419,635 + +2.9 3,419,635 + +3.5 3,419,635 + +4.7 3,419,635 + +0.8 3,419,635 + +0.4 3,419,635 + +3.9 3,419,684 - Psyr_2846 0.13 +2.5 3,419,767 + Psyr_2846 0.21 -0.3 3,419,767 + Psyr_2846 0.21 +5.0 3,419,767 + Psyr_2846 0.21 +4.4 3,419,783 - Psyr_2846 0.22 +0.8 3,419,783 - Psyr_2846 0.22 -0.1 3,419,783 - Psyr_2846 0.22 +2.8 3,419,783 - Psyr_2846 0.22 -0.9 3,419,783 - Psyr_2846 0.22 +2.2 3,419,783 - Psyr_2846 0.22 +3.5 3,419,783 - Psyr_2846 0.22 -0.7 3,419,783 - Psyr_2846 0.22 -1.3 3,419,783 - Psyr_2846 0.22 +2.7 3,419,948 + Psyr_2846 0.38 +3.3 3,419,948 + Psyr_2846 0.38 +0.1 3,419,982 + Psyr_2846 0.41 +3.7 3,419,983 - Psyr_2846 0.41 -0.3 3,419,983 - Psyr_2846 0.41 +1.4 3,420,073 + Psyr_2846 0.50 +4.9 3,420,073 + Psyr_2846 0.50 -0.9 3,420,073 + Psyr_2846 0.50 -1.3 3,420,073 + Psyr_2846 0.50 +1.1 3,420,073 + Psyr_2846 0.50 +1.2 3,420,073 + Psyr_2846 0.50 +2.5 3,420,073 + Psyr_2846 0.50 +1.6 3,420,074 - Psyr_2846 0.50 -3.0 3,420,074 - Psyr_2846 0.50 -0.8 3,420,074 - Psyr_2846 0.50 -3.2 3,420,074 - Psyr_2846 0.50 -0.0 3,420,074 - Psyr_2846 0.50 -1.2 3,420,074 - Psyr_2846 0.50 +2.5 3,420,074 - Psyr_2846 0.50 +0.2 3,420,074 - Psyr_2846 0.50 +3.4 3,420,103 + Psyr_2846 0.53 +3.9 3,420,103 + Psyr_2846 0.53 +1.7 3,420,143 + Psyr_2846 0.57 -0.1 3,420,143 + Psyr_2846 0.57 +2.5 3,420,143 + Psyr_2846 0.57 +0.2 3,420,143 + Psyr_2846 0.57 -0.4 3,420,143 + Psyr_2846 0.57 +3.5 3,420,144 - Psyr_2846 0.57 +2.7 3,420,144 - Psyr_2846 0.57 +1.3 3,420,144 - Psyr_2846 0.57 +2.9 3,420,144 - Psyr_2846 0.57 -1.0 3,420,144 - Psyr_2846 0.57 +1.8 3,420,148 + Psyr_2846 0.57 +3.9 3,420,148 + Psyr_2846 0.57 +3.2 3,420,148 + Psyr_2846 0.57 +2.0 3,420,148 + Psyr_2846 0.57 +5.0 3,420,148 + Psyr_2846 0.57 +0.9 3,420,149 - Psyr_2846 0.57 -1.4 3,420,201 - Psyr_2846 0.63 -0.3 3,420,201 - Psyr_2846 0.63 +1.8 3,420,201 - -2.8 3,420,373 - Psyr_2846 0.79 +2.8 3,420,373 - Psyr_2846 0.79 -1.3 3,420,373 - Psyr_2846 0.79 +1.2 3,420,373 - Psyr_2846 0.79 +2.0 3,420,765 + -0.3 3,420,765 + -1.1 3,420,765 + +3.4 3,420,765 + +3.6 3,420,765 + +2.4 3,420,765 + +0.7 3,420,765 + +1.5 3,420,765 + -0.8 3,420,765 + +2.5 3,420,765 + +1.8 3,420,765 + -0.4 3,420,765 + +4.1 3,420,765 + -1.0 3,420,765 + +3.4 3,420,765 + -2.0 3,420,765 + -0.8 3,420,765 + +3.1 3,420,765 + +1.5 3,420,766 - +0.3 3,420,766 - -0.8 3,420,766 - +2.9 3,420,766 - +3.4 3,420,766 - +4.3 3,420,766 - -2.1 3,420,766 - -0.7 3,420,766 - -0.6 3,420,766 - +0.1 3,420,766 - +0.2 3,420,766 - +0.1 3,420,766 - -0.5 3,420,766 - +1.3 3,420,766 - -1.6 3,420,767 + -1.0 3,420,767 + +0.7 3,420,767 + +2.8 3,420,767 + +4.8 3,420,767 + -1.4 3,420,767 + +3.9 3,420,767 + +2.8 3,420,767 + -3.1 3,420,767 + +2.5 3,420,767 + -2.6 3,420,767 + -1.4 3,420,767 + +0.5 3,420,767 + -2.4 3,420,767 + +0.1 3,420,768 - -1.8 3,420,768 - +1.5 3,420,768 - -2.3 3,420,768 - +4.4 3,420,768 - -0.4 3,420,768 - +2.0 3,420,768 - -3.0 3,420,768 - +2.5 3,420,768 - -0.8 3,420,768 - +3.1 3,420,768 - +0.1 3,420,768 - +1.5 3,420,768 - -1.7 3,420,768 - +0.1 3,420,768 - +0.2 3,420,768 - -0.8 3,420,768 - +3.7 3,420,768 - -0.3 3,420,768 - +4.3 3,420,769 + -2.8 3,420,769 + -0.9 3,420,769 + -1.7 3,420,769 + -0.8 3,420,769 + -1.8 3,420,769 + -3.3 3,420,770 - +2.6 3,420,770 - +3.6 3,420,770 - -1.5 3,420,770 - +3.4 3,420,770 - -0.8 3,421,001 + Psyr_2847 0.19 +2.6 3,421,132 - Psyr_2847 0.48 -1.5 3,421,205 - Psyr_2847 0.64 -5.1 3,421,280 + Psyr_2847 0.81 -0.8 3,421,281 - Psyr_2847 0.81 +2.2 3,421,323 + +0.2 3,421,323 + -3.3 3,421,323 + -3.1 3,421,324 - -0.8 3,421,324 - +2.6 3,421,397 + -0.8 3,421,397 + -0.8 3,421,397 + -0.8 3,421,397 + -1.2 3,421,398 - +3.4 3,421,398 - +2.6 3,421,398 - +0.1 3,421,398 - -2.7 3,421,398 - +2.8 3,421,398 - +1.2 3,421,408 + -0.8 3,421,408 + -0.8 3,421,409 - -5.1 3,421,409 - -1.0 3,421,409 - +2.9 3,421,410 + +1.2 3,421,410 + -2.0 3,421,411 - -0.1 3,421,411 - -0.8 3,421,411 - +1.2 3,421,411 - +1.6 3,421,411 - +2.8 3,421,411 - +2.8 3,421,418 - +0.0 3,421,418 - +0.8 3,421,433 + -2.8 3,421,434 - -0.8 3,421,438 + -0.8 3,421,442 + -2.8 3,421,443 - -3.4 3,421,469 + -1.8 3,421,469 + -3.5 3,421,469 + -0.8 3,421,470 - -2.7 3,421,470 - -0.8 3,421,533 + -0.8 3,421,557 + Psyr_2848 0.14 +1.2 3,421,558 - Psyr_2848 0.14 -4.1 3,421,558 - Psyr_2848 0.14 -4.5
Or see this region's nucleotide sequence