Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2833

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,406,841	+		Psyr_2832	0.57	+3.2
3,406,842	-		Psyr_2832	0.57	-1.1
3,406,842	-		Psyr_2832	0.57	-1.0
3,406,842	-		Psyr_2832	0.57	-0.6
3,406,894	-		Psyr_2832	0.63	-4.5
3,406,894	-		Psyr_2832	0.63	+2.1
3,407,066	-		Psyr_2832	0.79	+4.0
3,407,066	-		Psyr_2832	0.79	+3.6
3,407,066	-		Psyr_2832	0.79	+3.1
3,407,066	-		Psyr_2832	0.79	-0.6
3,407,066	-		Psyr_2832	0.79	-2.0
3,407,066	-		Psyr_2832	0.79	-1.2
3,407,336	+				+3.8
3,407,336	+				+6.0
3,407,340	+				+1.4
3,407,340	+				+4.9
3,407,505	-				+5.1
3,407,520	+				+0.4
3,407,630	+				-1.0
3,407,631	-				-0.2
3,407,631	-				+1.5
3,407,631	-				+3.7
3,407,631	-				+3.3
3,407,650	+				+1.9
3,407,651	-				+4.0
3,407,733	-				+1.4
3,407,747	+				+4.9
3,407,747	+				+5.6
3,407,748	-				+0.3
3,407,748	-				-1.2
3,407,806	+				+3.4
3,407,806	+				+2.7
3,407,806	+				+1.4
3,407,807	-				+2.8
3,407,807	-				+4.6
3,407,809	+				+0.4
3,407,809	+				-0.6
3,407,809	+				+4.8
3,407,809	+				-0.1
3,407,809	+				+4.2
3,407,809	+				+2.3
3,407,810	-				-1.0
3,407,810	-				-0.0
3,407,810	-				+2.1
3,407,810	-				+5.1
3,407,810	-				+3.5
3,408,479	+		Psyr_2833	0.65	+1.5
3,408,479	+		Psyr_2833	0.65	+1.1
3,408,479	+		Psyr_2833	0.65	-1.7
3,408,712	-		Psyr_2833	0.88	+5.2
3,408,938	+				+0.2
3,408,939	-				+1.6
3,408,939	-				+3.7
3,408,940	+				-0.7
3,408,941	-				+0.3
3,408,941	-				+3.0
3,409,014	+				+0.2
3,409,014	+				+4.6
3,409,014	+				-0.2
3,409,015	-				+3.7
3,409,015	-				-0.2
3,409,043	-				+5.8
3,409,047	-				+0.4
3,409,047	-				+1.1
3,409,049	+				+5.2
3,409,049	+				+5.5
3,409,050	-				-0.0
3,409,053	+				+4.5
3,409,072	+				+4.5
3,409,073	-				+2.2
3,409,200	-		Psyr_2834	0.31	+3.9
3,409,200	-		Psyr_2834	0.31	+0.7
3,409,207	-		Psyr_2834	0.33	+2.4
3,409,207	-		Psyr_2834	0.33	+2.5
3,409,207	-		Psyr_2834	0.33	+2.5
3,409,207	-		Psyr_2834	0.33	-1.2
3,409,216	+		Psyr_2834	0.35	+2.2
3,409,217	-		Psyr_2834	0.35	+1.7
3,409,226	+		Psyr_2834	0.37	+3.7
3,409,226	+		Psyr_2834	0.37	+0.1
3,409,226	+		Psyr_2834	0.37	-0.7
3,409,226	+		Psyr_2834	0.37	+5.7
3,409,226	+		Psyr_2834	0.37	+4.7
3,409,226	+		Psyr_2834	0.37	+1.2
3,409,226	+		Psyr_2834	0.37	+0.8
3,409,226	+		Psyr_2834	0.37	-0.2
3,409,226	+		Psyr_2834	0.37	+1.1
3,409,226	+		Psyr_2834	0.37	+4.3
3,409,227	-		Psyr_2834	0.37	+3.4
3,409,227	-		Psyr_2834	0.37	+2.2
3,409,227	-		Psyr_2834	0.37	+1.7
3,409,227	-		Psyr_2834	0.37	+2.2
3,409,227	-		Psyr_2834	0.37	-1.0
3,409,227	-		Psyr_2834	0.37	+4.5
3,409,227	-		Psyr_2834	0.37	+1.8
3,409,227	-		Psyr_2834	0.37	+1.9
3,409,227	-		Psyr_2834	0.37	-0.8
3,409,227	-		Psyr_2834	0.37	+2.7
3,409,230	+		Psyr_2834	0.38	-0.9
3,409,230	+		Psyr_2834	0.38	+1.9
3,409,231	-		Psyr_2834	0.38	+2.7
3,409,271	+		Psyr_2834	0.47	+5.3
3,409,303	+		Psyr_2834	0.54	+3.4
3,409,311	+		Psyr_2834	0.56	+4.6
3,409,311	+		Psyr_2834	0.56	+5.6
3,409,311	+		Psyr_2834	0.56	+3.6
3,409,312	-		Psyr_2834	0.56	+4.0
3,409,376	+		Psyr_2834	0.71	+0.9
3,409,433	+		Psyr_2834	0.83	+4.4
3,409,433	+		Psyr_2834	0.83	+2.4
3,409,467	+				-0.1
3,409,468	-				+1.5
3,409,502	+				+1.0
3,409,503	-				+0.2
3,409,504	+				+1.2
3,409,577	-				+1.0
3,409,580	-				+0.6
3,409,585	+				+5.2
3,409,586	-				+5.5
3,409,634	+		Psyr_2835	0.15	+5.7
3,409,634	+		Psyr_2835	0.15	+3.5
3,409,634	+		Psyr_2835	0.15	+0.0
3,409,634	+		Psyr_2835	0.15	+4.3
3,409,634	+		Psyr_2835	0.15	+1.4
3,409,634	+		Psyr_2835	0.15	+0.0
3,409,634	+		Psyr_2835	0.15	+1.1
3,409,634	+		Psyr_2835	0.15	+5.5
3,409,634	+		Psyr_2835	0.15	+3.3
3,409,635	-		Psyr_2835	0.15	+3.3
3,409,635	-		Psyr_2835	0.15	+3.5
3,409,635	-		Psyr_2835	0.15	+0.2
3,409,635	-		Psyr_2835	0.15	+2.0
3,409,635	-		Psyr_2835	0.15	+3.5
3,409,749	+		Psyr_2835	0.35	+1.2
3,409,750	-		Psyr_2835	0.35	-0.8
3,409,750	-		Psyr_2835	0.35	+5.0
3,409,750	-		Psyr_2835	0.35	+6.0