Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2829

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,403,252	-		Psyr_2828	0.72	+4.6
3,403,252	-		Psyr_2828	0.72	+4.7
3,403,252	-		Psyr_2828	0.72	+0.7
3,403,264	+		Psyr_2828	0.73	+5.9
3,403,264	+		Psyr_2828	0.73	+1.2
3,403,418	-		Psyr_2828	0.80	+2.7
3,403,496	+		Psyr_2828	0.84	+3.2
3,403,496	+		Psyr_2828	0.84	+4.4
3,403,497	-		Psyr_2828	0.84	+1.1
3,403,646	+				+2.8
3,403,647	-				+0.2
3,403,674	-				+6.9
3,403,825	+				+5.6
3,403,825	+				+4.0
3,403,825	+				+0.2
3,403,826	-				-0.4
3,403,826	-				+4.5
3,403,826	-				-2.1
3,403,830	+				+2.1
3,403,845	+				+1.8
3,403,846	-				+6.5
3,403,847	+				+2.5
3,403,847	+				-0.9
3,403,847	+				+1.5
3,403,847	+				+0.8
3,403,847	+				+0.4
3,403,848	-				+5.3
3,403,848	-				+2.0
3,403,848	-				+3.4
3,403,848	-				+5.2
3,403,848	-				+0.6
3,403,848	-				+3.9
3,403,848	-				+4.5
3,403,848	-				+5.3
3,403,848	-				+1.7
3,403,848	-				+3.6
3,403,848	-				+0.9
3,403,848	-				+5.7
3,403,848	-				+3.8
3,403,848	-				+1.1
3,403,856	-				+5.4
3,403,933	+				-0.9
3,403,934	-				+3.7
3,404,009	-				+1.8
3,404,020	+				+4.4
3,404,021	-				+1.5
3,404,030	+				+4.5
3,404,030	+				+4.3
3,404,030	+				+0.1
3,404,030	+				+4.4
3,404,030	+				-0.3
3,404,030	+				-0.0
3,404,030	+				-1.1
3,404,030	+				+4.4
3,404,031	-				+6.7
3,404,032	+				+1.6
3,404,032	+				+2.6
3,404,032	+				+3.8
3,404,032	+				+5.0
3,404,032	+				-2.1
3,404,032	+				+0.8
3,404,033	-				+1.6
3,404,033	-				+6.0
3,404,033	-				+5.2
3,404,033	-				+0.8
3,404,033	-				+2.3
3,404,033	-				+3.1
3,404,033	-				+1.9
3,404,033	-				+3.6
3,404,033	-				+0.1
3,404,033	-				+4.1
3,404,033	-				+2.0
3,404,044	+				+3.2
3,404,070	+				+0.5
3,404,070	+				+4.2
3,404,070	+				-0.8
3,404,071	-				+1.6
3,404,071	-				+3.9
3,404,147	+				+1.5
3,404,148	-				+3.4
3,404,213	+				+2.4
3,404,213	+				+2.9
3,404,213	+				+6.4
3,404,213	+				+4.9
3,404,214	-				+1.2
3,404,214	-				+1.6
3,404,214	-				+4.5
3,404,214	-				+5.4
3,404,255	-		Psyr_2829	0.19	+3.9
3,404,296	+		Psyr_2829	0.32	+1.4
3,404,296	+		Psyr_2829	0.32	+6.2
3,404,297	-		Psyr_2829	0.33	+1.3
3,404,297	-		Psyr_2829	0.33	+0.6
3,404,371	+		Psyr_2829	0.56	+4.7
3,404,653	-		Psyr_2830	0.23	+6.1
3,404,653	-		Psyr_2830	0.23	+1.5
3,404,668	-		Psyr_2830	0.25	+4.4
3,404,668	-		Psyr_2830	0.25	+5.2
3,405,023	-		Psyr_2830	0.80	+0.4
3,405,101	+				+2.8
3,405,153	+				+2.9
3,405,161	+				+5.2
3,405,161	+				+1.5
3,405,162	-				+0.1
3,405,162	-				+3.9
3,405,167	+				+2.4
3,405,167	+				+4.9
3,405,168	-				+3.6
3,405,220	-				-2.3
3,405,287	-				+3.0
3,405,287	-				+0.7
3,405,384	-				+0.1
3,405,384	-				+1.3
3,405,412	-				+1.6