Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2812 and Psyr_2813 are separated by 12 nucleotides Psyr_2813 and Psyr_2814 are separated by 22 nucleotides Psyr_2814 and Psyr_2815 are separated by 303 nucleotides Psyr_2815 and Psyr_2816 are separated by 967 nucleotides
Psyr_2812: Psyr_2812 - phage repressor protein, Serine peptidase, MEROPS family S24, at 3,388,088 to 3,388,738
_2812
Psyr_2813: Psyr_2813 - conserved hypothetical protein, at 3,388,751 to 3,389,023
_2813
Psyr_2814: Psyr_2814 - hypothetical protein, at 3,389,046 to 3,389,366
_2814
Psyr_2815: Psyr_2815 - conserved hypothetical protein, at 3,389,670 to 3,390,704
_2815
Psyr_2816: Psyr_2816 - hypothetical protein, at 3,391,672 to 3,392,451
_2816
Position (kb)
3389
3390
3391 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6
7 at 3388.751 kb on - strand at 3388.824 kb on + strand, within Psyr_2813 at 3388.824 kb on + strand, within Psyr_2813 at 3388.824 kb on + strand, within Psyr_2813 at 3388.974 kb on - strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.977 kb on + strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.978 kb on - strand, within Psyr_2813 at 3388.988 kb on - strand, within Psyr_2813 at 3389.046 kb on - strand at 3389.069 kb on + strand at 3389.290 kb on - strand, within Psyr_2814 at 3389.351 kb on + strand at 3389.352 kb on - strand at 3389.352 kb on - strand at 3389.428 kb on - strand at 3389.428 kb on - strand at 3389.431 kb on + strand at 3389.431 kb on + strand at 3389.431 kb on + strand at 3389.431 kb on + strand at 3389.431 kb on + strand at 3389.431 kb on + strand at 3389.431 kb on + strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.432 kb on - strand at 3389.495 kb on + strand at 3389.495 kb on + strand at 3389.496 kb on - strand at 3389.514 kb on + strand at 3389.514 kb on + strand at 3389.515 kb on - strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.564 kb on + strand at 3389.565 kb on - strand at 3389.565 kb on - strand at 3389.565 kb on - strand at 3389.565 kb on - strand at 3389.565 kb on - strand at 3389.565 kb on - strand at 3389.570 kb on - strand at 3389.570 kb on - strand at 3389.631 kb on + strand at 3389.631 kb on + strand at 3389.632 kb on - strand at 3389.632 kb on - strand at 3389.671 kb on + strand at 3389.672 kb on - strand at 3389.762 kb on + strand at 3389.762 kb on + strand at 3389.762 kb on + strand at 3389.763 kb on - strand at 3389.764 kb on + strand at 3389.764 kb on + strand at 3389.793 kb on + strand, within Psyr_2815 at 3389.793 kb on + strand, within Psyr_2815 at 3389.794 kb on - strand, within Psyr_2815 at 3389.794 kb on - strand, within Psyr_2815 at 3389.812 kb on + strand, within Psyr_2815 at 3389.812 kb on + strand, within Psyr_2815 at 3389.813 kb on - strand, within Psyr_2815 at 3389.813 kb on - strand, within Psyr_2815 at 3389.850 kb on + strand, within Psyr_2815 at 3389.894 kb on + strand, within Psyr_2815 at 3389.904 kb on - strand, within Psyr_2815 at 3389.904 kb on - strand, within Psyr_2815 at 3389.963 kb on - strand, within Psyr_2815 at 3389.975 kb on + strand, within Psyr_2815 at 3389.975 kb on + strand, within Psyr_2815 at 3389.975 kb on + strand, within Psyr_2815 at 3389.976 kb on - strand, within Psyr_2815 at 3389.979 kb on + strand, within Psyr_2815 at 3389.984 kb on - strand, within Psyr_2815 at 3390.030 kb on + strand, within Psyr_2815 at 3390.031 kb on - strand, within Psyr_2815 at 3390.032 kb on + strand, within Psyr_2815 at 3390.032 kb on + strand, within Psyr_2815 at 3390.032 kb on + strand, within Psyr_2815 at 3390.032 kb on + strand, within Psyr_2815 at 3390.032 kb on + strand, within Psyr_2815 at 3390.033 kb on - strand, within Psyr_2815 at 3390.033 kb on - strand, within Psyr_2815 at 3390.033 kb on - strand, within Psyr_2815 at 3390.036 kb on + strand, within Psyr_2815 at 3390.036 kb on + strand, within Psyr_2815 at 3390.036 kb on + strand, within Psyr_2815 at 3390.037 kb on - strand, within Psyr_2815 at 3390.139 kb on + strand, within Psyr_2815 at 3390.151 kb on - strand, within Psyr_2815 at 3390.151 kb on - strand, within Psyr_2815 at 3390.172 kb on + strand, within Psyr_2815 at 3390.173 kb on - strand, within Psyr_2815 at 3390.173 kb on - strand, within Psyr_2815 at 3390.203 kb on + strand, within Psyr_2815 at 3390.216 kb on + strand, within Psyr_2815 at 3390.216 kb on + strand, within Psyr_2815 at 3390.216 kb on + strand, within Psyr_2815 at 3390.217 kb on - strand, within Psyr_2815 at 3390.217 kb on - strand, within Psyr_2815 at 3390.217 kb on - strand, within Psyr_2815 at 3390.306 kb on + strand, within Psyr_2815 at 3390.306 kb on + strand, within Psyr_2815 at 3390.306 kb on + strand, within Psyr_2815 at 3390.306 kb on + strand, within Psyr_2815 at 3390.306 kb on + strand, within Psyr_2815 at 3390.306 kb on + strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.307 kb on - strand, within Psyr_2815 at 3390.310 kb on + strand, within Psyr_2815 at 3390.310 kb on + strand, within Psyr_2815 at 3390.311 kb on - strand, within Psyr_2815 at 3390.311 kb on - strand, within Psyr_2815 at 3390.311 kb on - strand, within Psyr_2815 at 3390.325 kb on + strand, within Psyr_2815 at 3390.325 kb on + strand, within Psyr_2815 at 3390.325 kb on + strand, within Psyr_2815 at 3390.325 kb on + strand, within Psyr_2815 at 3390.326 kb on - strand, within Psyr_2815 at 3390.326 kb on - strand, within Psyr_2815 at 3390.326 kb on - strand, within Psyr_2815 at 3390.404 kb on + strand, within Psyr_2815 at 3390.405 kb on - strand, within Psyr_2815 at 3390.405 kb on - strand, within Psyr_2815 at 3390.405 kb on - strand, within Psyr_2815 at 3390.418 kb on + strand, within Psyr_2815 at 3390.426 kb on + strand, within Psyr_2815 at 3390.427 kb on - strand, within Psyr_2815 at 3390.431 kb on + strand, within Psyr_2815 at 3390.431 kb on + strand, within Psyr_2815 at 3390.432 kb on - strand, within Psyr_2815 at 3390.432 kb on - strand, within Psyr_2815 at 3390.432 kb on - strand, within Psyr_2815 at 3390.432 kb on - strand, within Psyr_2815 at 3390.483 kb on - strand, within Psyr_2815 at 3390.516 kb on + strand, within Psyr_2815 at 3390.517 kb on - strand, within Psyr_2815 at 3390.517 kb on - strand, within Psyr_2815 at 3390.526 kb on - strand, within Psyr_2815 at 3390.617 kb on + strand at 3390.617 kb on + strand at 3390.617 kb on + strand at 3390.618 kb on - strand at 3390.618 kb on - strand at 3390.624 kb on + strand at 3390.625 kb on - strand at 3390.625 kb on - strand at 3390.657 kb on - strand at 3390.677 kb on + strand at 3390.677 kb on + strand at 3390.678 kb on - strand at 3390.680 kb on + strand at 3390.680 kb on + strand at 3390.680 kb on + strand at 3390.718 kb on + strand at 3390.719 kb on - strand at 3390.878 kb on + strand at 3390.878 kb on + strand at 3390.878 kb on + strand at 3390.879 kb on - strand at 3391.038 kb on - strand at 3391.111 kb on + strand at 3391.111 kb on + strand at 3391.111 kb on + strand at 3391.111 kb on + strand at 3391.111 kb on + strand at 3391.112 kb on - strand at 3391.112 kb on - strand at 3391.112 kb on - strand at 3391.127 kb on + strand at 3391.127 kb on + strand at 3391.127 kb on + strand at 3391.127 kb on + strand at 3391.128 kb on - strand at 3391.128 kb on - strand at 3391.171 kb on + strand at 3391.171 kb on + strand at 3391.171 kb on + strand at 3391.172 kb on - strand at 3391.172 kb on - strand at 3391.172 kb on - strand at 3391.549 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 3,388,751 - +3.7 3,388,824 + Psyr_2813 0.27 +2.2 3,388,824 + Psyr_2813 0.27 +3.7 3,388,824 + Psyr_2813 0.27 +1.6 3,388,974 - Psyr_2813 0.82 +2.3 3,388,977 + Psyr_2813 0.83 +5.9 3,388,977 + Psyr_2813 0.83 +2.8 3,388,977 + Psyr_2813 0.83 +5.3 3,388,977 + Psyr_2813 0.83 +5.8 3,388,977 + Psyr_2813 0.83 +1.0 3,388,977 + Psyr_2813 0.83 +5.1 3,388,977 + Psyr_2813 0.83 +1.8 3,388,977 + Psyr_2813 0.83 +5.0 3,388,977 + Psyr_2813 0.83 +5.1 3,388,977 + Psyr_2813 0.83 +3.3 3,388,977 + Psyr_2813 0.83 +2.0 3,388,977 + Psyr_2813 0.83 +2.2 3,388,978 - Psyr_2813 0.83 +4.7 3,388,978 - Psyr_2813 0.83 +1.6 3,388,978 - Psyr_2813 0.83 +0.3 3,388,978 - Psyr_2813 0.83 +4.0 3,388,978 - Psyr_2813 0.83 +3.4 3,388,978 - Psyr_2813 0.83 +4.1 3,388,978 - Psyr_2813 0.83 +3.0 3,388,978 - Psyr_2813 0.83 -4.2 3,388,978 - Psyr_2813 0.83 +3.1 3,388,978 - Psyr_2813 0.83 +0.3 3,388,978 - Psyr_2813 0.83 +3.3 3,388,978 - Psyr_2813 0.83 +3.7 3,388,978 - Psyr_2813 0.83 +2.1 3,388,978 - Psyr_2813 0.83 -2.2 3,388,988 - Psyr_2813 0.87 +3.3 3,389,046 - +2.1 3,389,069 + +0.1 3,389,290 - Psyr_2814 0.76 +3.0 3,389,351 + +1.1 3,389,352 - -1.1 3,389,352 - +5.0 3,389,428 - +4.7 3,389,428 - +4.1 3,389,431 + +2.3 3,389,431 + +6.4 3,389,431 + +1.7 3,389,431 + +0.9 3,389,431 + +2.5 3,389,431 + +3.2 3,389,431 + +0.5 3,389,432 - +3.0 3,389,432 - +1.1 3,389,432 - +0.9 3,389,432 - +1.6 3,389,432 - +5.8 3,389,432 - -0.4 3,389,432 - -0.0 3,389,432 - +2.6 3,389,432 - +7.0 3,389,432 - +3.8 3,389,495 + +1.3 3,389,495 + +3.8 3,389,496 - +1.6 3,389,514 + +3.7 3,389,514 + +4.2 3,389,515 - +0.3 3,389,564 + +3.2 3,389,564 + +5.8 3,389,564 + +3.1 3,389,564 + +0.1 3,389,564 + +2.8 3,389,564 + +2.1 3,389,564 + +1.2 3,389,564 + +2.6 3,389,564 + +4.5 3,389,565 - +3.9 3,389,565 - +6.3 3,389,565 - +1.7 3,389,565 - +1.7 3,389,565 - +1.5 3,389,565 - +5.0 3,389,570 - +4.5 3,389,570 - +1.8 3,389,631 + +2.6 3,389,631 + +2.9 3,389,632 - +1.8 3,389,632 - +2.8 3,389,671 + -0.7 3,389,672 - +2.7 3,389,762 + -0.0 3,389,762 + -0.7 3,389,762 + +2.4 3,389,763 - +2.4 3,389,764 + +3.5 3,389,764 + +4.7 3,389,793 + Psyr_2815 0.12 +3.7 3,389,793 + Psyr_2815 0.12 +3.8 3,389,794 - Psyr_2815 0.12 +3.7 3,389,794 - Psyr_2815 0.12 +2.8 3,389,812 + Psyr_2815 0.14 +3.8 3,389,812 + Psyr_2815 0.14 -1.0 3,389,813 - Psyr_2815 0.14 +3.4 3,389,813 - Psyr_2815 0.14 +4.3 3,389,850 + Psyr_2815 0.17 -1.9 3,389,894 + Psyr_2815 0.22 +3.1 3,389,904 - Psyr_2815 0.23 +2.3 3,389,904 - Psyr_2815 0.23 +3.5 3,389,963 - Psyr_2815 0.28 +5.7 3,389,975 + Psyr_2815 0.29 +0.4 3,389,975 + Psyr_2815 0.29 -0.7 3,389,975 + Psyr_2815 0.29 +1.1 3,389,976 - Psyr_2815 0.30 +6.0 3,389,979 + Psyr_2815 0.30 +2.1 3,389,984 - Psyr_2815 0.30 +7.4 3,390,030 + Psyr_2815 0.35 +4.0 3,390,031 - Psyr_2815 0.35 +6.3 3,390,032 + Psyr_2815 0.35 +3.0 3,390,032 + Psyr_2815 0.35 +5.8 3,390,032 + Psyr_2815 0.35 +1.8 3,390,032 + Psyr_2815 0.35 +0.8 3,390,032 + Psyr_2815 0.35 -0.0 3,390,033 - Psyr_2815 0.35 +2.9 3,390,033 - Psyr_2815 0.35 +1.5 3,390,033 - Psyr_2815 0.35 +6.4 3,390,036 + Psyr_2815 0.35 +3.8 3,390,036 + Psyr_2815 0.35 +4.8 3,390,036 + Psyr_2815 0.35 -0.1 3,390,037 - Psyr_2815 0.35 +3.7 3,390,139 + Psyr_2815 0.45 -1.0 3,390,151 - Psyr_2815 0.46 +4.5 3,390,151 - Psyr_2815 0.46 +6.6 3,390,172 + Psyr_2815 0.49 +2.7 3,390,173 - Psyr_2815 0.49 +1.8 3,390,173 - Psyr_2815 0.49 +2.3 3,390,203 + Psyr_2815 0.51 +1.9 3,390,216 + Psyr_2815 0.53 +2.1 3,390,216 + Psyr_2815 0.53 +6.9 3,390,216 + Psyr_2815 0.53 +5.5 3,390,217 - Psyr_2815 0.53 +6.0 3,390,217 - Psyr_2815 0.53 +6.1 3,390,217 - Psyr_2815 0.53 +6.2 3,390,306 + Psyr_2815 0.61 +2.9 3,390,306 + Psyr_2815 0.61 -0.1 3,390,306 + Psyr_2815 0.61 +5.0 3,390,306 + Psyr_2815 0.61 +6.6 3,390,306 + Psyr_2815 0.61 +2.7 3,390,306 + Psyr_2815 0.61 +2.1 3,390,307 - Psyr_2815 0.62 +2.7 3,390,307 - Psyr_2815 0.62 -0.4 3,390,307 - Psyr_2815 0.62 +1.0 3,390,307 - Psyr_2815 0.62 +4.1 3,390,307 - Psyr_2815 0.62 +4.3 3,390,307 - Psyr_2815 0.62 +0.5 3,390,307 - Psyr_2815 0.62 +4.5 3,390,310 + Psyr_2815 0.62 +6.2 3,390,310 + Psyr_2815 0.62 -1.2 3,390,311 - Psyr_2815 0.62 +3.6 3,390,311 - Psyr_2815 0.62 +4.0 3,390,311 - Psyr_2815 0.62 -0.7 3,390,325 + Psyr_2815 0.63 +5.1 3,390,325 + Psyr_2815 0.63 +6.1 3,390,325 + Psyr_2815 0.63 +6.1 3,390,325 + Psyr_2815 0.63 +2.5 3,390,326 - Psyr_2815 0.63 -4.3 3,390,326 - Psyr_2815 0.63 +3.6 3,390,326 - Psyr_2815 0.63 +0.8 3,390,404 + Psyr_2815 0.71 +0.5 3,390,405 - Psyr_2815 0.71 +0.5 3,390,405 - Psyr_2815 0.71 +3.3 3,390,405 - Psyr_2815 0.71 +1.8 3,390,418 + Psyr_2815 0.72 +4.7 3,390,426 + Psyr_2815 0.73 +5.8 3,390,427 - Psyr_2815 0.73 +4.5 3,390,431 + Psyr_2815 0.74 +5.2 3,390,431 + Psyr_2815 0.74 +1.5 3,390,432 - Psyr_2815 0.74 +5.3 3,390,432 - Psyr_2815 0.74 +5.0 3,390,432 - Psyr_2815 0.74 +1.2 3,390,432 - Psyr_2815 0.74 -0.2 3,390,483 - Psyr_2815 0.79 +1.5 3,390,516 + Psyr_2815 0.82 -0.7 3,390,517 - Psyr_2815 0.82 +3.1 3,390,517 - Psyr_2815 0.82 +4.9 3,390,526 - Psyr_2815 0.83 +3.4 3,390,617 + -0.7 3,390,617 + +0.3 3,390,617 + -0.7 3,390,618 - +5.9 3,390,618 - +2.3 3,390,624 + -0.7 3,390,625 - +1.3 3,390,625 - +2.2 3,390,657 - +3.0 3,390,677 + -0.7 3,390,677 + +2.8 3,390,678 - +5.8 3,390,680 + -0.7 3,390,680 + +0.8 3,390,680 + +2.2 3,390,718 + +0.6 3,390,719 - +1.4 3,390,878 + +4.3 3,390,878 + +2.1 3,390,878 + +0.1 3,390,879 - +2.7 3,391,038 - +0.8 3,391,111 + +1.6 3,391,111 + +5.7 3,391,111 + +4.5 3,391,111 + +5.4 3,391,111 + +1.3 3,391,112 - +2.0 3,391,112 - +4.3 3,391,112 - +2.4 3,391,127 + +6.3 3,391,127 + +0.1 3,391,127 + -0.7 3,391,127 + +1.1 3,391,128 - +5.2 3,391,128 - +5.7 3,391,171 + +0.5 3,391,171 + -0.3 3,391,171 + +1.0 3,391,172 - +1.6 3,391,172 - +2.5 3,391,172 - +0.6 3,391,549 - +0.3
Or see this region's nucleotide sequence