Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2794

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,376,459	+		Psyr_2793	0.33	+1.2
3,376,460	-		Psyr_2793	0.33	+4.3
3,376,527	-		Psyr_2793	0.38	+2.3
3,376,527	-		Psyr_2793	0.38	+4.1
3,376,530	+		Psyr_2793	0.38	+3.8
3,376,531	-		Psyr_2793	0.38	+1.1
3,376,672	-		Psyr_2793	0.48	+2.4
3,376,741	+		Psyr_2793	0.53	+4.8
3,376,741	+		Psyr_2793	0.53	+1.5
3,376,741	+		Psyr_2793	0.53	-0.4
3,376,742	-		Psyr_2793	0.53	+2.5
3,376,742	-		Psyr_2793	0.53	+3.6
3,376,767	+		Psyr_2793	0.55	+2.4
3,376,767	+		Psyr_2793	0.55	+4.8
3,376,767	+		Psyr_2793	0.55	+1.7
3,376,767	+		Psyr_2793	0.55	+3.7
3,376,767	+		Psyr_2793	0.55	+0.3
3,376,767	+		Psyr_2793	0.55	+0.1
3,376,768	-		Psyr_2793	0.55	+0.7
3,376,768	-		Psyr_2793	0.55	+2.3
3,376,768	-		Psyr_2793	0.55	+2.2
3,376,768	-		Psyr_2793	0.55	+4.1
3,376,768	-		Psyr_2793	0.55	+2.7
3,376,811	-		Psyr_2793	0.58	+3.5
3,376,833	+		Psyr_2793	0.59	+5.8
3,376,833	+		Psyr_2793	0.59	+1.5
3,376,833	+		Psyr_2793	0.59	+1.1
3,376,833	+		Psyr_2793	0.59	+6.0
3,376,833	+		Psyr_2793	0.59	+1.1
3,376,833	+		Psyr_2793	0.59	+3.0
3,376,834	-		Psyr_2793	0.59	-0.6
3,376,834	-		Psyr_2793	0.59	-0.7
3,376,834	-		Psyr_2793	0.59	+1.5
3,376,992	+		Psyr_2793	0.70	+6.9
3,376,992	+		Psyr_2793	0.70	+0.4
3,376,992	+		Psyr_2793	0.70	+1.6
3,376,992	+		Psyr_2793	0.70	-0.6
3,376,993	-		Psyr_2793	0.70	+1.8
3,376,993	-		Psyr_2793	0.70	+2.1
3,377,103	+		Psyr_2793	0.78	+2.8
3,377,103	+		Psyr_2793	0.78	+2.1
3,377,103	+		Psyr_2793	0.78	-0.5
3,377,103	+		Psyr_2793	0.78	+5.8
3,377,103	+		Psyr_2793	0.78	+3.0
3,377,103	+		Psyr_2793	0.78	+2.7
3,377,104	-		Psyr_2793	0.78	+5.2
3,377,104	-		Psyr_2793	0.78	+0.3
3,377,301	+				+5.1
3,377,301	+				+1.1
3,377,301	+				+6.5
3,377,301	+				+0.6
3,377,301	+				+2.0
3,377,301	+				+1.9
3,377,301	+				+5.5
3,377,302	-				+0.9
3,377,302	-				+3.9
3,377,302	-				+1.1
3,377,302	-				+6.1
3,377,302	-				+6.4
3,377,379	+				+5.1
3,377,380	-				+4.3
3,377,432	-				+1.3
3,377,449	+				+2.7
3,377,450	-				+1.2
3,377,450	-				-0.2
3,377,567	+		Psyr_2794	0.12	-1.1
3,377,567	+		Psyr_2794	0.12	+0.9
3,377,567	+		Psyr_2794	0.12	+4.0
3,377,567	+		Psyr_2794	0.12	+3.0
3,377,567	+		Psyr_2794	0.12	+4.1
3,377,568	-		Psyr_2794	0.12	+5.2
3,377,568	-		Psyr_2794	0.12	+4.6
3,377,568	-		Psyr_2794	0.12	+4.8
3,377,568	-		Psyr_2794	0.12	+3.9
3,377,742	+		Psyr_2794	0.25	+2.1
3,377,743	-		Psyr_2794	0.26	+1.6
3,377,743	-		Psyr_2794	0.26	+1.3
3,377,795	+		Psyr_2794	0.30	+4.7
3,377,795	+		Psyr_2794	0.30	-0.7
3,377,795	+		Psyr_2794	0.30	+1.2
3,377,795	+		Psyr_2794	0.30	+5.1
3,377,795	+		Psyr_2794	0.30	+1.2
3,377,795	+				-0.7
3,377,796	-		Psyr_2794	0.30	+3.1
3,377,796	-		Psyr_2794	0.30	+2.4
3,377,799	+		Psyr_2794	0.30	+0.8
3,378,012	-		Psyr_2794	0.46	+1.3
3,378,020	+		Psyr_2794	0.47	-1.8
3,378,020	+		Psyr_2794	0.47	+2.9
3,378,063	-		Psyr_2794	0.50	+4.9
3,378,086	+		Psyr_2794	0.52	+3.9
3,378,110	+		Psyr_2794	0.54	+1.3
3,378,110	+		Psyr_2794	0.54	+3.1
3,378,111	-		Psyr_2794	0.54	+2.6
3,378,111	-		Psyr_2794	0.54	+0.1
3,378,164	+		Psyr_2794	0.58	+4.8
3,378,164	+		Psyr_2794	0.58	+4.6
3,378,164	+		Psyr_2794	0.58	+4.6
3,378,165	-		Psyr_2794	0.58	-0.3
3,378,165	-		Psyr_2794	0.58	+1.8
3,378,165	-		Psyr_2794	0.58	+5.8
3,378,165	-		Psyr_2794	0.58	+4.7
3,378,281	+		Psyr_2794	0.67	+1.0
3,378,429	-		Psyr_2794	0.78	+3.2
3,378,443	+		Psyr_2794	0.79	+4.2
3,378,443	+		Psyr_2794	0.79	+4.9
3,378,443	+		Psyr_2794	0.79	-0.9
3,378,443	+		Psyr_2794	0.79	+5.6
3,378,444	-		Psyr_2794	0.79	+0.6
3,378,444	-		Psyr_2794	0.79	+2.6
3,378,444	-		Psyr_2794	0.79	+5.5
3,378,444	-		Psyr_2794	0.79	+3.9
3,378,497	+		Psyr_2794	0.83	-1.8
3,378,498	-		Psyr_2794	0.84	+4.4
3,378,498	-		Psyr_2794	0.84	-1.0
3,378,546	-		Psyr_2794	0.87	+1.7
3,378,560	+		Psyr_2794	0.88	+4.7
3,378,561	-		Psyr_2794	0.88	+0.6
3,378,700	-				+2.2
3,378,731	+				+1.0
3,378,732	-				+0.7
3,378,732	-				+5.7
3,378,801	+		Psyr_2795	0.22	+1.9
3,378,801	+		Psyr_2795	0.22	+1.9
3,378,801	+		Psyr_2795	0.22	+4.0
3,378,801	+		Psyr_2795	0.22	+3.6
3,378,801	+		Psyr_2795	0.22	+2.7
3,378,801	+		Psyr_2795	0.22	+1.0
3,378,801	+		Psyr_2795	0.22	+3.0
3,378,801	+		Psyr_2795	0.22	+4.9
3,378,801	+		Psyr_2795	0.22	-0.2
3,378,802	-		Psyr_2795	0.23	-0.2
3,378,802	-		Psyr_2795	0.23	+1.6
3,378,802	-		Psyr_2795	0.23	+1.5
3,378,802	-		Psyr_2795	0.23	+5.1
3,378,802	-		Psyr_2795	0.23	-0.3
3,378,802	-		Psyr_2795	0.23	+2.1
3,378,802	-		Psyr_2795	0.23	+4.9
3,378,802	-		Psyr_2795	0.23	+0.5
3,378,802	-		Psyr_2795	0.23	+5.6
3,378,802	-		Psyr_2795	0.23	+2.5
3,378,802	-		Psyr_2795	0.23	+1.3
3,378,802	-		Psyr_2795	0.23	+3.4
3,378,802	-		Psyr_2795	0.23	+5.7
3,378,805	+		Psyr_2795	0.23	+0.4
3,379,159	+				+0.3
3,379,159	+				+4.6
3,379,160	-				-1.2
3,379,160	-				+1.0
3,379,175	+				+1.4
3,379,230	+				+1.6
3,379,231	-				-1.1
3,379,231	-				+0.8
3,379,231	-				+2.6
3,379,231	-				+6.1
3,379,232	+				-2.5
3,379,232	+				-1.5
3,379,241	+				+3.3
3,379,242	-				+2.2
3,379,242	-				+3.1
3,379,242	-				+1.8
3,379,474	+		Psyr_2796	0.45	+6.0
3,379,498	+		Psyr_2796	0.49	+5.1
3,379,498	+		Psyr_2796	0.49	+4.0
3,379,498	+		Psyr_2796	0.49	+1.5
3,379,498	+		Psyr_2796	0.49	-0.4
3,379,498	+		Psyr_2796	0.49	+6.5
3,379,498	+		Psyr_2796	0.49	+5.2
3,379,499	-		Psyr_2796	0.49	+2.6
3,379,499	-		Psyr_2796	0.49	-0.9
3,379,499	-		Psyr_2796	0.49	+2.4
3,379,499	-		Psyr_2796	0.49	-0.1
3,379,499	-		Psyr_2796	0.49	+4.7
3,379,506	+		Psyr_2796	0.50	+2.1
3,379,507	-		Psyr_2796	0.51	-0.4
3,379,507	-		Psyr_2796	0.51	+3.8