Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2792 and Psyr_2793 overlap by 26 nucleotides Psyr_2793 and Psyr_2794 overlap by 4 nucleotides
Psyr_2792: Psyr_2792 - Phage putative head morphogenesis protein, SPP1 gp7, at 3,374,929 to 3,376,017
_2792
Psyr_2793: Psyr_2793 - hypothetical protein, at 3,375,992 to 3,377,413
_2793
Psyr_2794: Psyr_2794 - Protein of unknown function DUF264, at 3,377,410 to 3,378,711
_2794
Position (kb)
3375
3376
3377
3378 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6
7 at 3375.004 kb on - strand at 3375.011 kb on - strand at 3375.034 kb on + strand at 3375.034 kb on + strand at 3375.035 kb on - strand at 3375.035 kb on - strand at 3375.125 kb on + strand, within Psyr_2792 at 3375.125 kb on + strand, within Psyr_2792 at 3375.126 kb on - strand, within Psyr_2792 at 3375.126 kb on - strand, within Psyr_2792 at 3375.128 kb on + strand, within Psyr_2792 at 3375.128 kb on + strand, within Psyr_2792 at 3375.129 kb on - strand, within Psyr_2792 at 3375.129 kb on - strand, within Psyr_2792 at 3375.303 kb on + strand, within Psyr_2792 at 3375.303 kb on + strand, within Psyr_2792 at 3375.303 kb on + strand, within Psyr_2792 at 3375.304 kb on - strand, within Psyr_2792 at 3375.428 kb on - strand, within Psyr_2792 at 3375.473 kb on + strand, within Psyr_2792 at 3375.699 kb on + strand, within Psyr_2792 at 3375.752 kb on + strand, within Psyr_2792 at 3375.752 kb on + strand, within Psyr_2792 at 3375.753 kb on - strand, within Psyr_2792 at 3375.753 kb on - strand, within Psyr_2792 at 3375.792 kb on + strand, within Psyr_2792 at 3375.792 kb on + strand, within Psyr_2792 at 3375.795 kb on - strand, within Psyr_2792 at 3375.864 kb on - strand, within Psyr_2792 at 3376.022 kb on + strand at 3376.129 kb on - strand at 3376.169 kb on + strand, within Psyr_2793 at 3376.169 kb on + strand, within Psyr_2793 at 3376.169 kb on + strand, within Psyr_2793 at 3376.294 kb on - strand, within Psyr_2793 at 3376.459 kb on + strand, within Psyr_2793 at 3376.460 kb on - strand, within Psyr_2793 at 3376.527 kb on - strand, within Psyr_2793 at 3376.527 kb on - strand, within Psyr_2793 at 3376.530 kb on + strand, within Psyr_2793 at 3376.531 kb on - strand, within Psyr_2793 at 3376.672 kb on - strand, within Psyr_2793 at 3376.741 kb on + strand, within Psyr_2793 at 3376.741 kb on + strand, within Psyr_2793 at 3376.741 kb on + strand, within Psyr_2793 at 3376.742 kb on - strand, within Psyr_2793 at 3376.742 kb on - strand, within Psyr_2793 at 3376.767 kb on + strand, within Psyr_2793 at 3376.767 kb on + strand, within Psyr_2793 at 3376.767 kb on + strand, within Psyr_2793 at 3376.767 kb on + strand, within Psyr_2793 at 3376.767 kb on + strand, within Psyr_2793 at 3376.767 kb on + strand, within Psyr_2793 at 3376.768 kb on - strand, within Psyr_2793 at 3376.768 kb on - strand, within Psyr_2793 at 3376.768 kb on - strand, within Psyr_2793 at 3376.768 kb on - strand, within Psyr_2793 at 3376.768 kb on - strand, within Psyr_2793 at 3376.811 kb on - strand, within Psyr_2793 at 3376.833 kb on + strand, within Psyr_2793 at 3376.833 kb on + strand, within Psyr_2793 at 3376.833 kb on + strand, within Psyr_2793 at 3376.833 kb on + strand, within Psyr_2793 at 3376.833 kb on + strand, within Psyr_2793 at 3376.833 kb on + strand, within Psyr_2793 at 3376.834 kb on - strand, within Psyr_2793 at 3376.834 kb on - strand, within Psyr_2793 at 3376.834 kb on - strand, within Psyr_2793 at 3376.992 kb on + strand, within Psyr_2793 at 3376.992 kb on + strand, within Psyr_2793 at 3376.992 kb on + strand, within Psyr_2793 at 3376.992 kb on + strand, within Psyr_2793 at 3376.993 kb on - strand, within Psyr_2793 at 3376.993 kb on - strand, within Psyr_2793 at 3377.103 kb on + strand, within Psyr_2793 at 3377.103 kb on + strand, within Psyr_2793 at 3377.103 kb on + strand, within Psyr_2793 at 3377.103 kb on + strand, within Psyr_2793 at 3377.103 kb on + strand, within Psyr_2793 at 3377.103 kb on + strand, within Psyr_2793 at 3377.104 kb on - strand, within Psyr_2793 at 3377.104 kb on - strand, within Psyr_2793 at 3377.301 kb on + strand at 3377.301 kb on + strand at 3377.301 kb on + strand at 3377.301 kb on + strand at 3377.301 kb on + strand at 3377.301 kb on + strand at 3377.301 kb on + strand at 3377.302 kb on - strand at 3377.302 kb on - strand at 3377.302 kb on - strand at 3377.302 kb on - strand at 3377.302 kb on - strand at 3377.379 kb on + strand at 3377.380 kb on - strand at 3377.432 kb on - strand at 3377.449 kb on + strand at 3377.450 kb on - strand at 3377.450 kb on - strand at 3377.567 kb on + strand, within Psyr_2794 at 3377.567 kb on + strand, within Psyr_2794 at 3377.567 kb on + strand, within Psyr_2794 at 3377.567 kb on + strand, within Psyr_2794 at 3377.567 kb on + strand, within Psyr_2794 at 3377.568 kb on - strand, within Psyr_2794 at 3377.568 kb on - strand, within Psyr_2794 at 3377.568 kb on - strand, within Psyr_2794 at 3377.568 kb on - strand, within Psyr_2794 at 3377.742 kb on + strand, within Psyr_2794 at 3377.743 kb on - strand, within Psyr_2794 at 3377.743 kb on - strand, within Psyr_2794 at 3377.795 kb on + strand, within Psyr_2794 at 3377.795 kb on + strand, within Psyr_2794 at 3377.795 kb on + strand, within Psyr_2794 at 3377.795 kb on + strand, within Psyr_2794 at 3377.795 kb on + strand, within Psyr_2794 at 3377.795 kb on + strand at 3377.796 kb on - strand, within Psyr_2794 at 3377.796 kb on - strand, within Psyr_2794 at 3377.799 kb on + strand, within Psyr_2794 at 3378.012 kb on - strand, within Psyr_2794 at 3378.020 kb on + strand, within Psyr_2794 at 3378.020 kb on + strand, within Psyr_2794 at 3378.063 kb on - strand, within Psyr_2794 at 3378.086 kb on + strand, within Psyr_2794 at 3378.110 kb on + strand, within Psyr_2794 at 3378.110 kb on + strand, within Psyr_2794 at 3378.111 kb on - strand, within Psyr_2794 at 3378.111 kb on - strand, within Psyr_2794 at 3378.164 kb on + strand, within Psyr_2794 at 3378.164 kb on + strand, within Psyr_2794 at 3378.164 kb on + strand, within Psyr_2794 at 3378.165 kb on - strand, within Psyr_2794 at 3378.165 kb on - strand, within Psyr_2794 at 3378.165 kb on - strand, within Psyr_2794 at 3378.165 kb on - strand, within Psyr_2794 at 3378.281 kb on + strand, within Psyr_2794
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 3,375,004 - +2.8 3,375,011 - +3.6 3,375,034 + +5.7 3,375,034 + +0.9 3,375,035 - +1.1 3,375,035 - +5.6 3,375,125 + Psyr_2792 0.18 +4.1 3,375,125 + Psyr_2792 0.18 +2.4 3,375,126 - Psyr_2792 0.18 +6.0 3,375,126 - Psyr_2792 0.18 +6.1 3,375,128 + Psyr_2792 0.18 +5.2 3,375,128 + Psyr_2792 0.18 +0.6 3,375,129 - Psyr_2792 0.18 -0.7 3,375,129 - Psyr_2792 0.18 +4.8 3,375,303 + Psyr_2792 0.34 +4.9 3,375,303 + Psyr_2792 0.34 +4.2 3,375,303 + Psyr_2792 0.34 -4.0 3,375,304 - Psyr_2792 0.34 +1.6 3,375,428 - Psyr_2792 0.46 +1.3 3,375,473 + Psyr_2792 0.50 -0.5 3,375,699 + Psyr_2792 0.71 +1.1 3,375,752 + Psyr_2792 0.76 +4.9 3,375,752 + Psyr_2792 0.76 +0.1 3,375,753 - Psyr_2792 0.76 +3.0 3,375,753 - Psyr_2792 0.76 +6.1 3,375,792 + Psyr_2792 0.79 +1.6 3,375,792 + Psyr_2792 0.79 +2.3 3,375,795 - Psyr_2792 0.80 +1.7 3,375,864 - Psyr_2792 0.86 +0.4 3,376,022 + +3.4 3,376,129 - +2.1 3,376,169 + Psyr_2793 0.12 -2.5 3,376,169 + Psyr_2793 0.12 +0.0 3,376,169 + Psyr_2793 0.12 +4.6 3,376,294 - Psyr_2793 0.21 +1.3 3,376,459 + Psyr_2793 0.33 +1.2 3,376,460 - Psyr_2793 0.33 +4.3 3,376,527 - Psyr_2793 0.38 +2.3 3,376,527 - Psyr_2793 0.38 +4.1 3,376,530 + Psyr_2793 0.38 +3.8 3,376,531 - Psyr_2793 0.38 +1.1 3,376,672 - Psyr_2793 0.48 +2.4 3,376,741 + Psyr_2793 0.53 +4.8 3,376,741 + Psyr_2793 0.53 +1.5 3,376,741 + Psyr_2793 0.53 -0.4 3,376,742 - Psyr_2793 0.53 +2.5 3,376,742 - Psyr_2793 0.53 +3.6 3,376,767 + Psyr_2793 0.55 +2.4 3,376,767 + Psyr_2793 0.55 +4.8 3,376,767 + Psyr_2793 0.55 +1.7 3,376,767 + Psyr_2793 0.55 +3.7 3,376,767 + Psyr_2793 0.55 +0.3 3,376,767 + Psyr_2793 0.55 +0.1 3,376,768 - Psyr_2793 0.55 +0.7 3,376,768 - Psyr_2793 0.55 +2.3 3,376,768 - Psyr_2793 0.55 +2.2 3,376,768 - Psyr_2793 0.55 +4.1 3,376,768 - Psyr_2793 0.55 +2.7 3,376,811 - Psyr_2793 0.58 +3.5 3,376,833 + Psyr_2793 0.59 +5.8 3,376,833 + Psyr_2793 0.59 +1.5 3,376,833 + Psyr_2793 0.59 +1.1 3,376,833 + Psyr_2793 0.59 +6.0 3,376,833 + Psyr_2793 0.59 +1.1 3,376,833 + Psyr_2793 0.59 +3.0 3,376,834 - Psyr_2793 0.59 -0.6 3,376,834 - Psyr_2793 0.59 -0.7 3,376,834 - Psyr_2793 0.59 +1.5 3,376,992 + Psyr_2793 0.70 +6.9 3,376,992 + Psyr_2793 0.70 +0.4 3,376,992 + Psyr_2793 0.70 +1.6 3,376,992 + Psyr_2793 0.70 -0.6 3,376,993 - Psyr_2793 0.70 +1.8 3,376,993 - Psyr_2793 0.70 +2.1 3,377,103 + Psyr_2793 0.78 +2.8 3,377,103 + Psyr_2793 0.78 +2.1 3,377,103 + Psyr_2793 0.78 -0.5 3,377,103 + Psyr_2793 0.78 +5.8 3,377,103 + Psyr_2793 0.78 +3.0 3,377,103 + Psyr_2793 0.78 +2.7 3,377,104 - Psyr_2793 0.78 +5.2 3,377,104 - Psyr_2793 0.78 +0.3 3,377,301 + +5.1 3,377,301 + +1.1 3,377,301 + +6.5 3,377,301 + +0.6 3,377,301 + +2.0 3,377,301 + +1.9 3,377,301 + +5.5 3,377,302 - +0.9 3,377,302 - +3.9 3,377,302 - +1.1 3,377,302 - +6.1 3,377,302 - +6.4 3,377,379 + +5.1 3,377,380 - +4.3 3,377,432 - +1.3 3,377,449 + +2.7 3,377,450 - +1.2 3,377,450 - -0.2 3,377,567 + Psyr_2794 0.12 -1.1 3,377,567 + Psyr_2794 0.12 +0.9 3,377,567 + Psyr_2794 0.12 +4.0 3,377,567 + Psyr_2794 0.12 +3.0 3,377,567 + Psyr_2794 0.12 +4.1 3,377,568 - Psyr_2794 0.12 +5.2 3,377,568 - Psyr_2794 0.12 +4.6 3,377,568 - Psyr_2794 0.12 +4.8 3,377,568 - Psyr_2794 0.12 +3.9 3,377,742 + Psyr_2794 0.25 +2.1 3,377,743 - Psyr_2794 0.26 +1.6 3,377,743 - Psyr_2794 0.26 +1.3 3,377,795 + Psyr_2794 0.30 +4.7 3,377,795 + Psyr_2794 0.30 -0.7 3,377,795 + Psyr_2794 0.30 +1.2 3,377,795 + Psyr_2794 0.30 +5.1 3,377,795 + Psyr_2794 0.30 +1.2 3,377,795 + -0.7 3,377,796 - Psyr_2794 0.30 +3.1 3,377,796 - Psyr_2794 0.30 +2.4 3,377,799 + Psyr_2794 0.30 +0.8 3,378,012 - Psyr_2794 0.46 +1.3 3,378,020 + Psyr_2794 0.47 -1.8 3,378,020 + Psyr_2794 0.47 +2.9 3,378,063 - Psyr_2794 0.50 +4.9 3,378,086 + Psyr_2794 0.52 +3.9 3,378,110 + Psyr_2794 0.54 +1.3 3,378,110 + Psyr_2794 0.54 +3.1 3,378,111 - Psyr_2794 0.54 +2.6 3,378,111 - Psyr_2794 0.54 +0.1 3,378,164 + Psyr_2794 0.58 +4.8 3,378,164 + Psyr_2794 0.58 +4.6 3,378,164 + Psyr_2794 0.58 +4.6 3,378,165 - Psyr_2794 0.58 -0.3 3,378,165 - Psyr_2794 0.58 +1.8 3,378,165 - Psyr_2794 0.58 +5.8 3,378,165 - Psyr_2794 0.58 +4.7 3,378,281 + Psyr_2794 0.67 +1.0
Or see this region's nucleotide sequence