Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2790

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,372,861	-		Psyr_2789	0.22	+0.3
3,372,989	+		Psyr_2789	0.35	+1.1
3,372,990	-		Psyr_2789	0.36	+4.1
3,372,990	-		Psyr_2789	0.36	+2.5
3,373,014	-		Psyr_2789	0.38	+5.1
3,373,053	-		Psyr_2789	0.42	+2.2
3,373,053	-		Psyr_2789	0.42	+4.7
3,373,212	-		Psyr_2789	0.59	+4.1
3,373,320	-		Psyr_2789	0.70	+6.2
3,373,328	+		Psyr_2789	0.71	+6.0
3,373,328	+		Psyr_2789	0.71	+2.1
3,373,329	-		Psyr_2789	0.71	+4.2
3,373,436	+		Psyr_2789	0.82	+1.6
3,373,437	-		Psyr_2789	0.83	+1.3
3,373,437	-		Psyr_2789	0.83	+6.7
3,373,437	-		Psyr_2789	0.83	+0.8
3,373,544	+				+1.2
3,373,544	+				+3.5
3,373,545	-				+5.4
3,373,569	-				+5.3
3,373,569	-				+2.4
3,373,569	-				+4.2
3,373,569	-				+1.8
3,373,616	+				+2.2
3,373,616	+				+1.7
3,373,661	+				+2.9
3,374,051	+		Psyr_2790	0.60	+2.9
3,374,051	+				+1.9
3,374,052	-		Psyr_2790	0.60	+1.3
3,374,083	-		Psyr_2790	0.64	+3.8
3,374,109	+		Psyr_2790	0.68	+1.1
3,374,110	-		Psyr_2790	0.68	+5.5
3,374,110	-		Psyr_2790	0.68	+2.2
3,374,366	+				+0.3
3,374,367	-				+4.0
3,374,492	+				-0.7
3,374,496	+		Psyr_2791	0.14	-0.7
3,374,626	+		Psyr_2791	0.42	-0.7
3,374,626	+		Psyr_2791	0.42	-0.7
3,374,627	-		Psyr_2791	0.42	+1.3
3,374,627	-		Psyr_2791	0.42	+0.5
3,374,649	-		Psyr_2791	0.47	+2.9
3,374,748	-		Psyr_2791	0.67	+5.2
3,374,808	+		Psyr_2791	0.80	-2.7
3,374,826	+		Psyr_2791	0.84	-2.3
3,374,835	-		Psyr_2791	0.86	+1.8
3,374,836	+		Psyr_2791	0.86	+3.9
3,374,836	+		Psyr_2791	0.86	+1.3
3,374,841	-		Psyr_2791	0.87	+0.9
3,374,841	-		Psyr_2791	0.87	+4.7
3,374,936	-				+1.3
3,375,004	-				+2.8
3,375,011	-				+3.6
3,375,034	+				+5.7
3,375,034	+				+0.9
3,375,035	-				+1.1
3,375,035	-				+5.6
3,375,125	+		Psyr_2792	0.18	+4.1
3,375,125	+		Psyr_2792	0.18	+2.4
3,375,126	-		Psyr_2792	0.18	+6.0
3,375,126	-		Psyr_2792	0.18	+6.1
3,375,128	+		Psyr_2792	0.18	+5.2
3,375,128	+		Psyr_2792	0.18	+0.6
3,375,129	-		Psyr_2792	0.18	-0.7
3,375,129	-		Psyr_2792	0.18	+4.8
3,375,303	+		Psyr_2792	0.34	+4.9
3,375,303	+		Psyr_2792	0.34	+4.2
3,375,303	+		Psyr_2792	0.34	-4.0
3,375,304	-		Psyr_2792	0.34	+1.6