Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2789

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,371,675	+				+0.9
3,371,675	+				+2.3
3,371,675	+				+2.6
3,371,676	-				-0.1
3,371,676	-				+1.0
3,371,676	-				+2.9
3,371,712	-				+6.4
3,371,789	+		Psyr_2787	0.23	+2.1
3,371,850	+		Psyr_2787	0.35	+0.6
3,371,901	-		Psyr_2787	0.45	+3.3
3,372,102	-		Psyr_2787	0.85	+0.7
3,372,128	+				+0.6
3,372,128	+				+0.3
3,372,129	-				+5.0
3,372,179	+				+0.2
3,372,179	+				-0.2
3,372,179	+				-2.1
3,372,180	-				+1.8
3,372,180	-				+4.8
3,372,180	-				+5.2
3,372,180	-				+6.0
3,372,180	-				+1.7
3,372,253	+		Psyr_2788	0.17	+3.0
3,372,253	+		Psyr_2788	0.17	+5.8
3,372,308	+		Psyr_2788	0.29	+5.3
3,372,308	+		Psyr_2788	0.29	+4.4
3,372,308	+		Psyr_2788	0.29	-0.6
3,372,309	-		Psyr_2788	0.29	+2.9
3,372,467	+		Psyr_2788	0.64	+0.4
3,372,467	+		Psyr_2788	0.64	+5.3
3,372,467	+		Psyr_2788	0.64	+4.8
3,372,467	+		Psyr_2788	0.64	+4.9
3,372,468	-		Psyr_2788	0.64	+4.7
3,372,468	-				+4.4
3,372,593	+				+4.3
3,372,861	-		Psyr_2789	0.22	+0.3
3,372,989	+		Psyr_2789	0.35	+1.1
3,372,990	-		Psyr_2789	0.36	+4.1
3,372,990	-		Psyr_2789	0.36	+2.5
3,373,014	-		Psyr_2789	0.38	+5.1
3,373,053	-		Psyr_2789	0.42	+2.2
3,373,053	-		Psyr_2789	0.42	+4.7
3,373,212	-		Psyr_2789	0.59	+4.1
3,373,320	-		Psyr_2789	0.70	+6.2
3,373,328	+		Psyr_2789	0.71	+6.0
3,373,328	+		Psyr_2789	0.71	+2.1
3,373,329	-		Psyr_2789	0.71	+4.2
3,373,436	+		Psyr_2789	0.82	+1.6
3,373,437	-		Psyr_2789	0.83	+1.3
3,373,437	-		Psyr_2789	0.83	+6.7
3,373,437	-		Psyr_2789	0.83	+0.8
3,373,544	+				+1.2
3,373,544	+				+3.5
3,373,545	-				+5.4
3,373,569	-				+5.3
3,373,569	-				+2.4
3,373,569	-				+4.2
3,373,569	-				+1.8
3,373,616	+				+2.2
3,373,616	+				+1.7
3,373,661	+				+2.9
3,374,051	+		Psyr_2790	0.60	+2.9
3,374,051	+				+1.9
3,374,052	-		Psyr_2790	0.60	+1.3
3,374,083	-		Psyr_2790	0.64	+3.8
3,374,109	+		Psyr_2790	0.68	+1.1
3,374,110	-		Psyr_2790	0.68	+5.5
3,374,110	-		Psyr_2790	0.68	+2.2
3,374,366	+				+0.3
3,374,367	-				+4.0
3,374,492	+				-0.7
3,374,496	+		Psyr_2791	0.14	-0.7