Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2780

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,364,041	-		Psyr_2778	0.20	+6.7
3,364,203	-		Psyr_2778	0.41	-0.7
3,364,228	-		Psyr_2778	0.45	+4.5
3,364,275	-		Psyr_2778	0.51	+1.4
3,364,275	-		Psyr_2778	0.51	+4.7
3,364,288	-		Psyr_2778	0.53	+5.0
3,364,299	+		Psyr_2778	0.54	+5.2
3,364,443	-		Psyr_2778	0.73	+1.0
3,364,693	+		Psyr_2779	0.12	-0.3
3,364,693	+		Psyr_2779	0.12	+2.3
3,364,825	-		Psyr_2779	0.51	-0.5
3,364,899	-		Psyr_2779	0.73	+1.4
3,364,899	-		Psyr_2779	0.73	+3.6
3,364,962	+				+4.6
3,364,971	+				+1.4
3,364,989	+				+1.9
3,364,993	+				+2.3
3,364,993	+				+5.0
3,364,993	+				+1.0
3,364,993	+				+4.7
3,364,993	+				+5.1
3,364,993	+				+4.1
3,364,993	+				+0.7
3,364,994	-				+3.5
3,364,994	-				+2.5
3,364,994	-				+3.5
3,365,173	+				+3.8
3,365,174	-				+4.7
3,365,174	-				+1.3
3,365,189	+				+1.1
3,365,437	+		Psyr_2780	0.13	+2.0
3,365,471	+		Psyr_2780	0.14	+2.5
3,365,471	+		Psyr_2780	0.14	+0.7
3,365,472	-		Psyr_2780	0.14	+2.6
3,365,521	+		Psyr_2780	0.15	+5.3
3,365,522	-		Psyr_2780	0.15	+6.4
3,365,522	-		Psyr_2780	0.15	+1.8
3,365,538	+		Psyr_2780	0.16	+1.9
3,365,539	-		Psyr_2780	0.16	+1.2
3,365,734	+		Psyr_2780	0.21	+3.4
3,365,734	+		Psyr_2780	0.21	+0.8
3,365,734	+		Psyr_2780	0.21	+3.0
3,365,735	-		Psyr_2780	0.21	+1.3
3,365,735	-		Psyr_2780	0.21	+7.0
3,365,791	+		Psyr_2780	0.23	+3.5
3,365,791	+		Psyr_2780	0.23	+5.5
3,365,791	+		Psyr_2780	0.23	+1.3
3,365,791	+		Psyr_2780	0.23	-0.3
3,365,791	+		Psyr_2780	0.23	+4.0
3,365,791	+		Psyr_2780	0.23	+2.0
3,365,791	+		Psyr_2780	0.23	-1.2
3,365,791	+		Psyr_2780	0.23	+3.4
3,365,791	+		Psyr_2780	0.23	-1.7
3,365,791	+		Psyr_2780	0.23	+4.4
3,365,792	-		Psyr_2780	0.23	+1.6
3,365,792	-		Psyr_2780	0.23	+4.5
3,365,792	-		Psyr_2780	0.23	+5.8
3,365,792	-		Psyr_2780	0.23	+2.0
3,365,792	-		Psyr_2780	0.23	+5.9
3,365,792	-		Psyr_2780	0.23	+4.6
3,365,792	-		Psyr_2780	0.23	+5.6
3,365,792	-		Psyr_2780	0.23	+6.2
3,365,792	-		Psyr_2780	0.23	+2.5
3,365,792	-		Psyr_2780	0.23	+2.4
3,365,797	+		Psyr_2780	0.23	+0.9
3,365,797	+		Psyr_2780	0.23	+1.9
3,365,797	+		Psyr_2780	0.23	-0.2
3,365,798	-		Psyr_2780	0.23	+3.5
3,365,798	-		Psyr_2780	0.23	+2.8
3,365,798	-		Psyr_2780	0.23	+0.6
3,365,864	-		Psyr_2780	0.25	+6.8
3,365,864	-		Psyr_2780	0.25	+5.7
3,365,864	-		Psyr_2780	0.25	+1.6
3,365,943	+		Psyr_2780	0.27	+0.5
3,365,944	-		Psyr_2780	0.27	+4.7
3,366,059	-		Psyr_2780	0.31	-0.7
3,366,059	-		Psyr_2780	0.31	+5.5
3,366,059	-		Psyr_2780	0.31	+3.1
3,366,059	-		Psyr_2780	0.31	+4.2
3,366,291	+		Psyr_2780	0.37	+3.9
3,366,291	+		Psyr_2780	0.37	-1.0
3,366,291	+		Psyr_2780	0.37	+2.8
3,366,292	-		Psyr_2780	0.37	+2.9
3,366,292	-		Psyr_2780	0.37	+1.4
3,366,292	-		Psyr_2780	0.37	+5.8
3,366,292	-		Psyr_2780	0.37	+5.7
3,366,432	-		Psyr_2780	0.41	+4.9
3,366,446	+		Psyr_2780	0.42	-0.7
3,366,446	+		Psyr_2780	0.42	-2.0
3,366,446	+		Psyr_2780	0.42	-1.9
3,366,543	-		Psyr_2780	0.44	+0.3
3,366,565	+		Psyr_2780	0.45	-3.4
3,366,565	+		Psyr_2780	0.45	-0.7
3,366,566	-		Psyr_2780	0.45	+4.9
3,366,566	-		Psyr_2780	0.45	+2.0
3,366,566	-		Psyr_2780	0.45	+5.4
3,366,728	+		Psyr_2780	0.50	+4.0
3,366,728	+		Psyr_2780	0.50	+1.3
3,366,728	+		Psyr_2780	0.50	+4.0
3,366,729	-		Psyr_2780	0.50	+6.1
3,366,956	+		Psyr_2780	0.56	-1.4
3,366,956	+		Psyr_2780	0.56	+4.2
3,366,957	-		Psyr_2780	0.56	+5.2
3,366,981	-		Psyr_2780	0.57	+5.1
3,366,981	-		Psyr_2780	0.57	+4.9
3,366,981	-		Psyr_2780	0.57	+5.2
3,367,042	+		Psyr_2780	0.59	+6.0
3,367,042	+		Psyr_2780	0.59	+1.8
3,367,042	+		Psyr_2780	0.59	+1.7
3,367,060	+		Psyr_2780	0.59	+5.4
3,367,061	-		Psyr_2780	0.59	+0.5
3,367,061	-		Psyr_2780	0.59	+5.7
3,367,181	+		Psyr_2780	0.63	+0.4
3,367,199	-		Psyr_2780	0.63	+4.8
3,367,199	-		Psyr_2780	0.63	+5.4
3,367,352	+		Psyr_2780	0.68	+0.3
3,367,352	+		Psyr_2780	0.68	+2.1
3,367,353	-		Psyr_2780	0.68	+4.1
3,367,353	-		Psyr_2780	0.68	+2.8
3,367,354	+		Psyr_2780	0.68	+1.0
3,367,382	+		Psyr_2780	0.69	-2.0
3,367,382	+		Psyr_2780	0.69	+3.3
3,367,382	+		Psyr_2780	0.69	+1.6
3,367,382	+		Psyr_2780	0.69	+2.0
3,367,383	-		Psyr_2780	0.69	+2.0
3,367,383	-		Psyr_2780	0.69	+3.2
3,367,383	-		Psyr_2780	0.69	+6.0
3,367,383	-		Psyr_2780	0.69	+4.7
3,367,383	-		Psyr_2780	0.69	+0.6
3,367,383	-		Psyr_2780	0.69	+4.4
3,367,383	-		Psyr_2780	0.69	+5.7
3,367,383	-		Psyr_2780	0.69	+1.6
3,367,383	-		Psyr_2780	0.69	+2.6
3,367,383	-		Psyr_2780	0.69	+3.0
3,367,383	-		Psyr_2780	0.69	+5.1
3,367,383	-		Psyr_2780	0.69	+1.6
3,367,383	-		Psyr_2780	0.69	+5.2
3,367,383	-		Psyr_2780	0.69	+5.8
3,367,383	-		Psyr_2780	0.69	+4.7
3,367,383	-		Psyr_2780	0.69	+2.5
3,367,383	-		Psyr_2780	0.69	+5.7
3,367,383	-		Psyr_2780	0.69	+1.1
3,367,384	+		Psyr_2780	0.69	+1.3
3,367,384	+		Psyr_2780	0.69	+4.3
3,367,384	+		Psyr_2780	0.69	-0.7
3,367,384	+		Psyr_2780	0.69	+1.0
3,367,384	+		Psyr_2780	0.69	+3.0
3,367,385	-		Psyr_2780	0.69	+5.5
3,367,431	+				+2.8
3,367,431	+		Psyr_2780	0.70	-4.0
3,367,431	+		Psyr_2780	0.70	+0.9
3,367,449	-		Psyr_2780	0.70	+2.6
3,367,457	+		Psyr_2780	0.71	+1.9
3,367,605	+		Psyr_2780	0.75	+6.2
3,367,605	+		Psyr_2780	0.75	+0.4
3,367,605	+		Psyr_2780	0.75	+0.2
3,367,605	+		Psyr_2780	0.75	+0.0
3,367,606	-		Psyr_2780	0.75	+3.6
3,367,606	-		Psyr_2780	0.75	+1.8
3,367,606	-		Psyr_2780	0.75	+1.3
3,367,647	+		Psyr_2780	0.76	-0.0
3,367,727	+		Psyr_2780	0.78	+1.7
3,367,728	-		Psyr_2780	0.78	+2.0
3,367,728	-		Psyr_2780	0.78	+6.6
3,367,728	-		Psyr_2780	0.78	+2.7
3,367,767	+		Psyr_2780	0.80	+6.1
3,367,767	+		Psyr_2780	0.80	+4.1
3,367,767	+		Psyr_2780	0.80	+0.8
3,367,767	+		Psyr_2780	0.80	+5.7
3,367,768	-		Psyr_2780	0.80	+6.1
3,367,768	-		Psyr_2780	0.80	+7.1
3,367,768	-		Psyr_2780	0.80	+1.4
3,367,768	-		Psyr_2780	0.80	+4.7
3,367,768	-		Psyr_2780	0.80	+5.1
3,367,768	-		Psyr_2780	0.80	+5.4
3,367,768	-		Psyr_2780	0.80	+5.9
3,367,922	+		Psyr_2780	0.84	+5.5
3,367,951	+		Psyr_2780	0.85	+4.2
3,368,003	+		Psyr_2780	0.86	+1.0
3,368,003	+		Psyr_2780	0.86	+0.3
3,368,003	+		Psyr_2780	0.86	+1.9
3,368,003	+		Psyr_2780	0.86	+1.7
3,368,004	-		Psyr_2780	0.86	+1.7
3,368,210	+				+4.2
3,368,210	+				+3.0
3,368,211	-				+5.2
3,368,557	+		Psyr_2781	0.28	+2.5
3,368,557	+		Psyr_2781	0.28	+2.3
3,368,558	-		Psyr_2781	0.28	+3.4
3,368,609	+		Psyr_2781	0.49	+2.8
3,368,610	-		Psyr_2781	0.49	+2.5
3,368,777	+				+0.6
3,368,777	+				+0.3
3,368,837	-				+4.9
3,368,980	-		Psyr_2782	0.47	+0.8
3,369,039	-		Psyr_2782	0.62	+5.7
3,369,039	-		Psyr_2782	0.62	+1.6
3,369,080	+		Psyr_2782	0.73	+1.5
3,369,080	+		Psyr_2782	0.73	+1.2
3,369,082	+		Psyr_2782	0.74	+0.5
3,369,082	+		Psyr_2782	0.74	+2.3
3,369,082	+		Psyr_2782	0.74	+0.2
3,369,082	+		Psyr_2782	0.74	+0.7
3,369,082	+		Psyr_2782	0.74	+4.3
3,369,082	+		Psyr_2782	0.74	+2.3
3,369,082	+		Psyr_2782	0.74	+3.1
3,369,082	+		Psyr_2782	0.74	+5.5
3,369,082	+		Psyr_2782	0.74	+4.0
3,369,082	+		Psyr_2782	0.74	+5.6
3,369,082	+		Psyr_2782	0.74	+4.7
3,369,082	+		Psyr_2782	0.74	+5.4
3,369,083	-		Psyr_2782	0.74	+6.6
3,369,083	-		Psyr_2782	0.74	+1.4
3,369,083	-		Psyr_2782	0.74	+7.5
3,369,083	-		Psyr_2782	0.74	+3.3
3,369,083	-		Psyr_2782	0.74	+3.4
3,369,083	-		Psyr_2782	0.74	+5.8
3,369,083	-		Psyr_2782	0.74	+5.2
3,369,295	+		Psyr_2783	0.17	+3.0
3,369,296	-		Psyr_2783	0.17	+2.2
3,369,304	+		Psyr_2783	0.18	+2.9
3,369,304	+		Psyr_2783	0.18	+2.0
3,369,305	-		Psyr_2783	0.18	+1.7
3,369,388	+		Psyr_2783	0.31	+5.2
3,369,388	+		Psyr_2783	0.31	+6.5
3,369,388	+		Psyr_2783	0.31	+5.7
3,369,389	-		Psyr_2783	0.31	+3.6
3,369,389	-		Psyr_2783	0.31	+7.0
3,369,389	-		Psyr_2783	0.31	+5.6
3,369,389	-		Psyr_2783	0.31	+1.9