Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2777

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,362,155	+				+1.9
3,362,165	+				+0.8
3,362,166	-				+5.7
3,362,170	+				+6.4
3,362,170	+				+4.3
3,362,171	-				+2.9
3,362,285	+				+3.5
3,362,285	+				+0.6
3,362,285	+				+0.5
3,362,285	+				+3.7
3,362,286	-				+1.9
3,362,286	-				+5.0
3,362,286	-				+4.9
3,362,286	-				+2.7
3,362,286	-				+1.8
3,362,286	-				+6.0
3,362,342	+				+1.1
3,362,360	+				+1.7
3,362,361	-				+6.4
3,362,361	-				+2.8
3,362,361	-				+5.2
3,362,363	+				+3.9
3,362,363	+				+3.1
3,362,363	+				+1.8
3,362,363	+				+4.7
3,362,363	+				-0.7
3,362,364	-				+6.7
3,362,386	-				+2.7
3,362,447	-				+6.5
3,362,448	+				-0.6
3,362,448	+				+0.6
3,362,449	-				+4.4
3,362,449	-				+5.4
3,362,449	-				+2.4
3,362,516	-		Psyr_2776	0.13	+2.1
3,362,516	-		Psyr_2776	0.13	+5.2
3,362,519	-		Psyr_2776	0.13	+2.2
3,362,519	-		Psyr_2776	0.13	+6.0
3,362,549	-		Psyr_2776	0.18	+4.5
3,362,563	+		Psyr_2776	0.20	+0.6
3,362,605	+		Psyr_2776	0.26	+5.6
3,362,605	+		Psyr_2776	0.26	+0.3
3,362,605	+		Psyr_2776	0.26	+6.8
3,362,605	+		Psyr_2776	0.26	-0.3
3,362,606	-		Psyr_2776	0.26	+5.5
3,362,606	-		Psyr_2776	0.26	+1.7
3,362,606	-		Psyr_2776	0.26	+5.5
3,362,606	-		Psyr_2776	0.26	+3.1
3,362,609	+		Psyr_2776	0.27	+4.5
3,362,610	-		Psyr_2776	0.27	+5.8
3,362,610	-		Psyr_2776	0.27	+5.2
3,362,666	+		Psyr_2776	0.35	+1.7
3,362,668	+		Psyr_2776	0.36	+3.4
3,362,668	+		Psyr_2776	0.36	+1.4
3,362,668	+		Psyr_2776	0.36	+2.1
3,362,668	+		Psyr_2776	0.36	+5.3
3,362,669	-		Psyr_2776	0.36	+4.9
3,362,747	+		Psyr_2776	0.48	+1.3
3,362,748	-		Psyr_2776	0.48	+1.4
3,362,750	+		Psyr_2776	0.48	+1.1
3,362,792	+		Psyr_2776	0.54	+1.7
3,362,792	+		Psyr_2776	0.54	+5.6
3,362,793	-		Psyr_2776	0.55	+2.4
3,362,793	-		Psyr_2776	0.55	+4.9
3,362,825	-		Psyr_2776	0.59	+6.3
3,362,922	+		Psyr_2776	0.74	+1.0
3,362,922	+		Psyr_2776	0.74	-2.2
3,362,922	+		Psyr_2776	0.74	+4.2
3,362,923	-		Psyr_2776	0.74	+2.5
3,362,923	-		Psyr_2776	0.74	+4.9
3,362,923	-		Psyr_2776	0.74	+0.1
3,362,923	-		Psyr_2776	0.74	+5.6
3,362,943	+				+3.2
3,362,944	-		Psyr_2776	0.77	+5.0
3,363,093	+				+1.7
3,363,094	-				+2.1
3,363,094	-				+6.3
3,363,138	+				+5.8
3,363,201	-				+1.0
3,363,201	-				+1.1
3,363,219	+		Psyr_2777	0.12	+3.3
3,363,255	-		Psyr_2777	0.17	+1.9
3,363,297	+		Psyr_2777	0.22	+1.4
3,363,297	+		Psyr_2777	0.22	+3.1
3,363,297	+		Psyr_2777	0.22	-1.1
3,363,297	+		Psyr_2777	0.22	-0.7
3,363,298	-		Psyr_2777	0.23	+4.9
3,363,298	-		Psyr_2777	0.23	+5.9
3,363,298	-		Psyr_2777	0.23	+4.8
3,363,396	+		Psyr_2777	0.35	+3.1
3,363,396	+		Psyr_2777	0.35	+1.7
3,363,408	+		Psyr_2777	0.37	-0.9
3,363,408	+		Psyr_2777	0.37	+0.7
3,363,409	-		Psyr_2777	0.37	+4.8
3,363,449	-		Psyr_2777	0.42	+0.2
3,363,449	-		Psyr_2777	0.42	+1.7
3,363,449	-		Psyr_2777	0.42	+4.6
3,363,489	+		Psyr_2777	0.48	+6.4
3,363,489	+		Psyr_2777	0.48	+7.4
3,363,489	+		Psyr_2777	0.48	+5.3
3,363,489	+		Psyr_2777	0.48	+2.8
3,363,557	-		Psyr_2777	0.56	+1.1
3,363,557	-		Psyr_2777	0.56	+4.0
3,363,789	+		Psyr_2777	0.87	-0.2
3,363,789	+		Psyr_2777	0.87	+1.1
3,363,789	+		Psyr_2777	0.87	+4.7
3,363,879	+				+1.9
3,363,879	+				+1.5
3,363,880	-				-4.4
3,363,937	+				-3.5
3,363,937	+				+6.0
3,363,938	-				+1.7
3,363,938	-				+6.5
3,364,041	-		Psyr_2778	0.20	+6.7
3,364,203	-		Psyr_2778	0.41	-0.7
3,364,228	-		Psyr_2778	0.45	+4.5
3,364,275	-		Psyr_2778	0.51	+1.4
3,364,275	-		Psyr_2778	0.51	+4.7
3,364,288	-		Psyr_2778	0.53	+5.0
3,364,299	+		Psyr_2778	0.54	+5.2
3,364,443	-		Psyr_2778	0.73	+1.0
3,364,693	+		Psyr_2779	0.12	-0.3
3,364,693	+		Psyr_2779	0.12	+2.3
3,364,825	-		Psyr_2779	0.51	-0.5