Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2773

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,359,632	+		Psyr_2772	0.76	+2.2
3,359,632	+		Psyr_2772	0.76	+5.5
3,359,632	+		Psyr_2772	0.76	+5.3
3,359,632	+		Psyr_2772	0.76	+0.8
3,359,633	-		Psyr_2772	0.76	+1.0
3,359,633	-		Psyr_2772	0.76	-0.1
3,359,633	-		Psyr_2772	0.76	+4.9
3,359,633	-		Psyr_2772	0.76	+2.5
3,359,716	+		Psyr_2772	0.78	+1.4
3,359,716	+		Psyr_2772	0.78	+4.3
3,359,717	-		Psyr_2772	0.78	+2.5
3,359,717	-		Psyr_2772	0.78	+2.0
3,359,717	-		Psyr_2772	0.78	+1.3
3,359,717	-		Psyr_2772	0.78	+2.2
3,359,803	+		Psyr_2772	0.81	+2.8
3,359,803	+		Psyr_2772	0.81	+5.2
3,359,803	+		Psyr_2772	0.81	+6.2
3,359,804	-		Psyr_2772	0.81	+3.5
3,359,804	-		Psyr_2772	0.81	+2.2
3,359,804	-		Psyr_2772	0.81	+0.9
3,359,804	-		Psyr_2772	0.81	+4.0
3,360,022	+		Psyr_2772	0.87	+4.0
3,360,023	-		Psyr_2772	0.87	+0.7
3,360,023	-		Psyr_2772	0.87	+0.1
3,360,023	-		Psyr_2772	0.87	+1.7
3,360,075	+		Psyr_2772	0.88	+1.1
3,360,232	+				+4.6
3,360,232	+				+0.8
3,360,232	+				+3.9
3,360,232	+				+6.0
3,360,233	-				+5.8
3,360,233	-				+5.5
3,360,233	-				+2.2
3,360,325	+				+0.6
3,360,325	+				+1.7
3,360,325	+				+4.0
3,360,325	+				+0.4
3,360,325	+				+1.9
3,360,325	+				+4.5
3,360,325	+				+4.2
3,360,326	-				+2.8
3,360,326	-				+0.7
3,360,326	-				+2.3
3,360,326	-				+0.7
3,360,326	-				+0.0
3,360,326	-				+6.2
3,360,326	-				-1.4
3,360,326	-				+3.1
3,360,326	-				+2.7
3,360,326	-				+6.0
3,360,326	-				+1.6
3,360,326	-				+1.2
3,360,327	+				+1.1
3,360,327	+				+4.6
3,360,327	+				-1.0
3,360,327	+				+3.3
3,360,327	+				+1.0
3,360,327	+				+3.3
3,360,327	+				+0.2
3,360,327	+				+0.8
3,360,327	+				+2.8
3,360,327	+				+0.7
3,360,327	+				+1.9
3,360,327	+				+1.3
3,360,327	+				+2.4
3,360,327	+				+0.3
3,360,327	+				-0.8
3,360,327	+				+0.8
3,360,328	-				+4.5
3,360,328	-				+6.4
3,360,328	-				-0.3
3,360,328	-				+5.7
3,360,328	-				+6.0
3,360,328	-				+1.6
3,360,370	-				-1.4
3,360,370	-				+3.7
3,360,508	-				+4.8
3,360,543	-				+3.7
3,360,548	+				+0.3
3,360,649	-		Psyr_2773	0.17	+7.9
3,360,657	+		Psyr_2773	0.18	+2.3
3,360,657	+		Psyr_2773	0.18	+2.2
3,360,658	-		Psyr_2773	0.18	+2.8
3,360,658	-		Psyr_2773	0.18	+7.0
3,360,658	-		Psyr_2773	0.18	+6.2
3,360,658	-		Psyr_2773	0.18	+2.6
3,360,716	+		Psyr_2773	0.28	+0.4
3,360,717	-		Psyr_2773	0.28	+0.7
3,360,717	-		Psyr_2773	0.28	+5.0
3,360,813	+		Psyr_2773	0.43	+0.3
3,360,814	-		Psyr_2773	0.44	+0.6
3,360,814	-		Psyr_2773	0.44	+5.6
3,360,814	-		Psyr_2773	0.44	+4.7
3,360,814	-		Psyr_2773	0.44	+1.6
3,360,814	-		Psyr_2773	0.44	+3.1
3,360,814	-		Psyr_2773	0.44	+3.5
3,360,817	+		Psyr_2773	0.44	-4.7
3,360,818	-		Psyr_2773	0.44	+5.5
3,360,860	+		Psyr_2773	0.51	-0.7
3,360,860	+		Psyr_2773	0.51	-0.7
3,360,860	+		Psyr_2773	0.51	-2.3
3,360,861	-		Psyr_2773	0.51	+6.2
3,360,861	-		Psyr_2773	0.51	+3.1
3,360,861	-		Psyr_2773	0.51	+6.8
3,360,861	-		Psyr_2773	0.51	+3.9
3,360,861	-		Psyr_2773	0.51	+5.9
3,360,896	-		Psyr_2773	0.57	+2.5
3,360,900	+		Psyr_2773	0.58	-3.7
3,360,900	+		Psyr_2773	0.58	-0.7
3,360,900	+		Psyr_2773	0.58	+1.3
3,360,948	+		Psyr_2773	0.66	+3.9
3,360,948	+		Psyr_2773	0.66	-5.3
3,361,046	-		Psyr_2773	0.82	+6.2
3,361,046	-		Psyr_2773	0.82	+4.0
3,361,061	+		Psyr_2773	0.84	+2.3
3,361,067	+		Psyr_2773	0.85	+0.9
3,361,071	-		Psyr_2773	0.86	+1.4
3,361,107	+				+2.2
3,361,108	-				+5.3
3,361,142	+				-0.9
3,361,143	-				+5.2
3,361,189	-				+5.1
3,361,189	-				+2.1
3,361,189	-				+5.6
3,361,189	-				+5.0
3,361,204	+				+5.3
3,361,205	-				+4.2
3,361,205	-				+1.8
3,361,306	+		Psyr_2774	0.21	+5.1
3,361,306	+		Psyr_2774	0.21	+2.0
3,361,307	-		Psyr_2774	0.21	+4.8
3,361,344	-		Psyr_2774	0.27	+6.2
3,361,754	+				+1.1
3,361,754	+				+2.3
3,361,754	+				-0.9
3,361,755	-				+2.1
3,361,755	-				+6.3
3,361,806	+				+1.7
3,361,806	+				+2.8
3,361,806	+				+4.6
3,361,806	+				-1.3
3,361,807	-				+2.9
3,361,883	+		Psyr_2775	0.19	+0.9
3,361,885	+		Psyr_2775	0.19	+1.5
3,361,885	+		Psyr_2775	0.19	-0.8
3,361,885	+		Psyr_2775	0.19	+4.9
3,361,885	+		Psyr_2775	0.19	+3.7
3,361,885	+		Psyr_2775	0.19	+0.8
3,361,885	+		Psyr_2775	0.19	+0.3
3,361,885	+		Psyr_2775	0.19	+6.0
3,361,886	-		Psyr_2775	0.20	+6.1
3,361,886	-		Psyr_2775	0.20	+2.8
3,361,886	-		Psyr_2775	0.20	+1.1
3,361,886	-		Psyr_2775	0.20	+2.6
3,361,886	-		Psyr_2775	0.20	+5.6
3,361,886	-		Psyr_2775	0.20	+3.0
3,361,886	-		Psyr_2775	0.20	+3.4
3,361,886	-		Psyr_2775	0.20	+5.3
3,361,886	-		Psyr_2775	0.20	+4.3
3,361,886	-		Psyr_2775	0.20	+6.0
3,361,886	-		Psyr_2775	0.20	+6.3
3,361,886	-		Psyr_2775	0.20	+6.6
3,361,886	-		Psyr_2775	0.20	+3.2
3,361,889	+		Psyr_2775	0.21	+0.7
3,362,006	+		Psyr_2775	0.55	+0.7
3,362,006	+		Psyr_2775	0.55	+3.4
3,362,006	+		Psyr_2775	0.55	+0.6
3,362,006	+		Psyr_2775	0.55	+1.6
3,362,060	+		Psyr_2775	0.71	+1.6
3,362,060	+		Psyr_2775	0.71	+6.3
3,362,060	+		Psyr_2775	0.71	+3.1
3,362,060	+		Psyr_2775	0.71	+0.8
3,362,061	-		Psyr_2775	0.72	+1.7
3,362,061	-		Psyr_2775	0.72	+4.3
3,362,061	-		Psyr_2775	0.72	+6.7
3,362,061	-		Psyr_2775	0.72	+2.2
3,362,061	-		Psyr_2775	0.72	+3.8
3,362,072	+		Psyr_2775	0.75	+1.3
3,362,072	+		Psyr_2775	0.75	+0.4
3,362,072	+		Psyr_2775	0.75	+4.1
3,362,072	+		Psyr_2775	0.75	+1.3
3,362,072	+		Psyr_2775	0.75	+1.6
3,362,073	-		Psyr_2775	0.75	+6.2
3,362,073	-		Psyr_2775	0.75	+3.4
3,362,073	-		Psyr_2775	0.75	+1.4
3,362,073	-		Psyr_2775	0.75	+6.1
3,362,087	+		Psyr_2775	0.79	+1.4
3,362,087	+		Psyr_2775	0.79	+4.5
3,362,087	+		Psyr_2775	0.79	+2.4
3,362,088	-		Psyr_2775	0.80	+4.6
3,362,088	-		Psyr_2775	0.80	+0.6
3,362,155	+				+1.9