Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2764 and Psyr_2765 overlap by 4 nucleotides Psyr_2765 and Psyr_2766 are separated by 12 nucleotides Psyr_2766 and Psyr_2767 overlap by 4 nucleotides Psyr_2767 and Psyr_2768 are separated by 295 nucleotides
Psyr_2764: Psyr_2764 - conserved hypothetical protein, at 3,351,260 to 3,352,504
_2764
Psyr_2765: Psyr_2765 - conserved domain protein, at 3,352,501 to 3,352,713
_2765
Psyr_2766: Psyr_2766 - conserved hypothetical protein, at 3,352,726 to 3,353,253
_2766
Psyr_2767: Psyr_2767 - Glycoside hydrolase, family 19, at 3,353,250 to 3,353,783
_2767
Psyr_2768: Psyr_2768 - tail fiber assembly domain protein, at 3,354,079 to 3,354,447
_2768
Position (kb) 3352
3353
3354 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 3352.003 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.032 kb on + strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.033 kb on - strand, within Psyr_2764 at 3352.054 kb on - strand, within Psyr_2764 at 3352.332 kb on + strand, within Psyr_2764 at 3352.333 kb on - strand, within Psyr_2764 at 3352.539 kb on + strand, within Psyr_2765 at 3352.685 kb on + strand, within Psyr_2765 at 3352.685 kb on + strand, within Psyr_2765 at 3352.685 kb on + strand, within Psyr_2765 at 3352.686 kb on - strand, within Psyr_2765 at 3352.686 kb on - strand, within Psyr_2765 at 3352.704 kb on + strand at 3352.716 kb on + strand at 3352.717 kb on - strand at 3352.738 kb on - strand at 3352.999 kb on - strand, within Psyr_2766 at 3352.999 kb on - strand, within Psyr_2766 at 3353.186 kb on + strand, within Psyr_2766 at 3353.278 kb on + strand at 3353.480 kb on - strand, within Psyr_2767 at 3353.546 kb on + strand, within Psyr_2767 at 3353.686 kb on + strand, within Psyr_2767 at 3353.687 kb on - strand, within Psyr_2767 at 3353.777 kb on + strand at 3353.778 kb on - strand at 3353.807 kb on + strand at 3353.808 kb on - strand at 3353.844 kb on + strand at 3353.844 kb on + strand at 3353.845 kb on - strand at 3353.845 kb on - strand at 3353.863 kb on + strand at 3353.863 kb on + strand at 3353.864 kb on - strand at 3353.874 kb on + strand at 3353.874 kb on + strand at 3353.875 kb on - strand at 3353.889 kb on + strand at 3353.889 kb on + strand at 3353.943 kb on + strand at 3353.943 kb on + strand at 3353.943 kb on + strand at 3353.948 kb on - strand at 3353.990 kb on + strand at 3353.990 kb on + strand at 3353.990 kb on + strand at 3353.991 kb on - strand at 3353.991 kb on - strand at 3353.991 kb on - strand at 3354.046 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 3,352,003 + Psyr_2764 0.60 +3.9 3,352,032 + Psyr_2764 0.62 +5.6 3,352,032 + Psyr_2764 0.62 +6.7 3,352,032 + Psyr_2764 0.62 +1.8 3,352,032 + Psyr_2764 0.62 +0.2 3,352,032 + Psyr_2764 0.62 +2.9 3,352,032 + Psyr_2764 0.62 +3.8 3,352,032 + Psyr_2764 0.62 +6.1 3,352,033 - Psyr_2764 0.62 +0.7 3,352,033 - Psyr_2764 0.62 +0.9 3,352,033 - Psyr_2764 0.62 +2.2 3,352,033 - Psyr_2764 0.62 +6.1 3,352,033 - Psyr_2764 0.62 +5.3 3,352,033 - Psyr_2764 0.62 +5.9 3,352,033 - Psyr_2764 0.62 +1.9 3,352,054 - Psyr_2764 0.64 +6.3 3,352,332 + Psyr_2764 0.86 +7.5 3,352,333 - Psyr_2764 0.86 +4.2 3,352,539 + Psyr_2765 0.18 +1.7 3,352,685 + Psyr_2765 0.86 +6.7 3,352,685 + Psyr_2765 0.86 +2.4 3,352,685 + Psyr_2765 0.86 +2.6 3,352,686 - Psyr_2765 0.87 +4.1 3,352,686 - Psyr_2765 0.87 +2.2 3,352,704 + +4.8 3,352,716 + +1.3 3,352,717 - +2.1 3,352,738 - +1.9 3,352,999 - Psyr_2766 0.52 +6.7 3,352,999 - Psyr_2766 0.52 +4.0 3,353,186 + Psyr_2766 0.87 +4.5 3,353,278 + +1.6 3,353,480 - Psyr_2767 0.43 +0.7 3,353,546 + Psyr_2767 0.55 +4.3 3,353,686 + Psyr_2767 0.82 +1.6 3,353,687 - Psyr_2767 0.82 +6.2 3,353,777 + +4.3 3,353,778 - +5.1 3,353,807 + +4.5 3,353,808 - -1.5 3,353,844 + +2.3 3,353,844 + +2.5 3,353,845 - +5.5 3,353,845 - +1.1 3,353,863 + +3.0 3,353,863 + +1.8 3,353,864 - -1.7 3,353,874 + +5.7 3,353,874 + +4.0 3,353,875 - +0.3 3,353,889 + -3.0 3,353,889 + +0.1 3,353,943 + +4.8 3,353,943 + +1.9 3,353,943 + +2.0 3,353,948 - -1.5 3,353,990 + +3.5 3,353,990 + +5.7 3,353,990 + +2.8 3,353,991 - +2.2 3,353,991 - -0.7 3,353,991 - +1.3 3,354,046 + +1.9
Or see this region's nucleotide sequence