Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2712

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,293,331	+		Psyr_2711	0.68	-4.1
3,293,331	+		Psyr_2711	0.68	+1.9
3,293,332	-		Psyr_2711	0.68	-1.8
3,293,332	-		Psyr_2711	0.68	+0.6
3,293,372	-		Psyr_2711	0.70	+0.5
3,293,435	+		Psyr_2711	0.74	+1.4
3,293,435	+		Psyr_2711	0.74	+1.9
3,293,436	-		Psyr_2711	0.74	-0.4
3,293,436	-		Psyr_2711	0.74	+3.5
3,293,436	-		Psyr_2711	0.74	-3.0
3,293,436	-		Psyr_2711	0.74	-0.4
3,293,436	-		Psyr_2711	0.74	+1.9
3,293,443	+		Psyr_2711	0.74	+1.6
3,293,444	-		Psyr_2711	0.74	-0.0
3,293,581	+		Psyr_2711	0.81	-0.7
3,293,600	-		Psyr_2711	0.82	-1.8
3,293,707	-		Psyr_2711	0.87	+0.9
3,293,745	-		Psyr_2711	0.89	+3.3
3,293,822	+				+1.6
3,293,842	+				+0.2
3,293,842	+				+2.4
3,293,843	-				-1.5
3,293,843	-				+0.6
3,293,876	-				+2.2
3,294,023	+				+0.2
3,294,023	+				-3.8
3,294,023	+				-0.4
3,294,023	+				-0.4
3,294,023	+				-4.6
3,294,024	-				+2.8
3,294,024	-				+2.9
3,294,100	-				-0.1
3,294,109	-				-4.5
3,294,157	+				-1.8
3,294,157	+				+2.2
3,294,158	-				+3.1
3,294,158	-				-1.7
3,294,158	-				+0.6
3,294,158	-				+1.2
3,294,158	-				-0.4
3,294,310	+				-3.0
3,294,310	+				-1.5
3,294,505	+		Psyr_2712	0.28	-2.2
3,294,505	+		Psyr_2712	0.28	-0.4
3,294,505	+		Psyr_2712	0.28	+0.1
3,294,505	+		Psyr_2712	0.28	-1.3
3,294,505	+		Psyr_2712	0.28	-2.4
3,294,505	+		Psyr_2712	0.28	+0.6
3,294,505	+		Psyr_2712	0.28	-1.8
3,294,506	-		Psyr_2712	0.28	+1.6
3,294,506	-		Psyr_2712	0.28	-0.4
3,294,506	-		Psyr_2712	0.28	+1.9
3,294,506	-		Psyr_2712	0.28	+2.2
3,294,506	-		Psyr_2712	0.28	+3.3
3,294,524	-		Psyr_2712	0.31	-2.5
3,294,524	-		Psyr_2712	0.31	-0.3
3,294,583	+		Psyr_2712	0.39	+3.2
3,294,583	+		Psyr_2712	0.39	-2.7
3,294,583	+		Psyr_2712	0.39	-2.3
3,294,583	+		Psyr_2712	0.39	-2.0
3,294,583	+		Psyr_2712	0.39	+3.4
3,294,583	+		Psyr_2712	0.39	-1.4
3,294,583	+		Psyr_2712	0.39	+2.8
3,294,584	-		Psyr_2712	0.39	+1.9
3,294,584	-		Psyr_2712	0.39	+1.2
3,294,584	-		Psyr_2712	0.39	+1.6
3,294,584	-		Psyr_2712	0.39	+2.6
3,294,584	-		Psyr_2712	0.39	-1.1
3,294,643	+		Psyr_2712	0.48	+3.3
3,294,644	-		Psyr_2712	0.48	-0.3
3,294,644	-		Psyr_2712	0.48	+1.2
3,294,787	+		Psyr_2712	0.69	+2.4
3,294,787	+		Psyr_2712	0.69	-1.7
3,294,787	+		Psyr_2712	0.69	-1.3
3,294,787	+		Psyr_2712	0.69	-1.6
3,294,788	-		Psyr_2712	0.69	-1.3
3,294,788	-		Psyr_2712	0.69	-0.4
3,294,788	-		Psyr_2712	0.69	+3.8
3,294,788	-		Psyr_2712	0.69	+1.2
3,294,799	+		Psyr_2712	0.71	-3.0
3,294,799	+		Psyr_2712	0.71	-2.7
3,294,800	-		Psyr_2712	0.71	+2.4
3,294,800	-		Psyr_2712	0.71	-4.6
3,294,830	-		Psyr_2712	0.75	-1.9
3,295,103	+				-0.4
3,295,103	+				+1.6
3,295,116	+				+2.4
3,295,116	+				-0.4
3,295,117	-				-1.4
3,295,117	-				+0.6
3,295,117	-				-2.3
3,295,378	+		Psyr_2713	0.27	-0.4
3,295,378	+		Psyr_2713	0.27	-2.7
3,295,379	-				+2.4
3,295,379	-		Psyr_2713	0.27	+3.1
3,295,409	+		Psyr_2713	0.30	-4.4
3,295,453	+		Psyr_2713	0.35	-0.1
3,295,453	+		Psyr_2713	0.35	+0.6
3,295,454	-		Psyr_2713	0.35	+1.2
3,295,571	-		Psyr_2713	0.48	-1.7
3,295,614	-		Psyr_2713	0.53	-2.7
3,295,645	+		Psyr_2713	0.56	+1.2
3,295,645	+		Psyr_2713	0.56	-1.4
3,295,645	+		Psyr_2713	0.56	+4.1
3,295,645	+		Psyr_2713	0.56	-3.5
3,295,646	-		Psyr_2713	0.57	-0.7
3,295,646	-		Psyr_2713	0.57	+1.1
3,295,646	-		Psyr_2713	0.57	+2.2
3,295,646	-		Psyr_2713	0.57	+2.8
3,295,649	+		Psyr_2713	0.57	-3.6
3,295,649	+		Psyr_2713	0.57	+0.6
3,295,650	-		Psyr_2713	0.57	+0.6
3,295,650	-		Psyr_2713	0.57	-1.2
3,295,650	-		Psyr_2713	0.57	+3.7
3,295,650	-		Psyr_2713	0.57	-4.1
3,295,727	-		Psyr_2713	0.66	-0.4
3,295,921	-		Psyr_2713	0.87	-0.4