Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2662

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,232,022	-		Psyr_2661	0.17	-2.4
3,232,109	-		Psyr_2661	0.26	+3.3
3,232,192	+		Psyr_2661	0.33	-3.1
3,232,193	-		Psyr_2661	0.33	+0.8
3,232,270	+		Psyr_2661	0.40	-1.0
3,232,270	+		Psyr_2661	0.40	+2.8
3,232,270	+		Psyr_2661	0.40	-2.8
3,232,270	+		Psyr_2661	0.40	+1.4
3,232,271	-		Psyr_2661	0.40	+1.4
3,232,271	-		Psyr_2661	0.40	+1.4
3,232,271	-		Psyr_2661	0.40	+2.1
3,232,271	-		Psyr_2661	0.40	-0.7
3,232,271	-		Psyr_2661	0.40	-0.2
3,232,303	+		Psyr_2661	0.43	-1.5
3,232,303	+		Psyr_2661	0.43	-3.5
3,232,304	-		Psyr_2661	0.43	-0.9
3,232,326	+		Psyr_2661	0.45	-1.3
3,232,326	+		Psyr_2661	0.45	+2.8
3,232,327	-		Psyr_2661	0.46	-0.2
3,232,327	-		Psyr_2661	0.46	+2.1
3,232,327	-		Psyr_2661	0.46	+0.8
3,232,327	-		Psyr_2661	0.46	+2.4
3,232,375	+		Psyr_2661	0.50	-1.8
3,232,376	-		Psyr_2661	0.50	-0.2
3,232,468	+		Psyr_2661	0.59	-0.3
3,232,468	+		Psyr_2661	0.59	+1.4
3,232,469	-		Psyr_2661	0.59	-0.2
3,232,494	+		Psyr_2661	0.61	-0.2
3,232,494	+		Psyr_2661	0.61	-0.2
3,232,494	+		Psyr_2661	0.61	-1.4
3,232,499	-		Psyr_2661	0.61	-0.2
3,232,519	-		Psyr_2661	0.63	+2.6
3,232,564	+		Psyr_2661	0.67	+2.6
3,232,607	-		Psyr_2661	0.71	+2.8
3,232,649	-		Psyr_2661	0.75	-4.8
3,232,649	-		Psyr_2661	0.75	-2.0
3,232,649	-		Psyr_2661	0.75	-4.4
3,232,727	+		Psyr_2661	0.82	-4.2
3,232,801	-		Psyr_2661	0.89	-4.8
3,232,888	+				+1.8
3,232,888	+				-0.2
3,232,889	-				-0.2
3,232,947	+				+1.1
3,232,948	-				-2.8
3,232,964	+				-2.5
3,232,964	+				-0.2
3,232,964	+				-0.2
3,232,964	+				+3.0
3,232,965	-				-0.2
3,232,965	-				+2.4
3,232,965	-				-1.3
3,232,984	+				-1.5
3,232,985	-				+1.4
3,232,985	-				+3.7
3,232,985	-				-1.7
3,232,993	+				+2.6
3,232,995	+				-0.2
3,232,995	+				-3.0
3,232,996	-				-1.5
3,232,996	-				+2.6
3,233,055	-		Psyr_2662	0.14	-0.2
3,233,069	+		Psyr_2662	0.17	+1.4
3,233,070	-		Psyr_2662	0.17	+2.8
3,233,072	-		Psyr_2662	0.17	-1.6
3,233,166	+		Psyr_2662	0.34	-0.5
3,233,378	+		Psyr_2662	0.72	-4.0
3,233,378	+		Psyr_2662	0.72	-2.6
3,233,378	+		Psyr_2662	0.72	-0.2
3,233,379	-		Psyr_2662	0.73	-1.1
3,233,379	-		Psyr_2662	0.73	-1.3
3,233,379	-		Psyr_2662	0.73	-2.7
3,233,379	-		Psyr_2662	0.73	-0.2
3,233,380	+		Psyr_2662	0.73	-3.4
3,233,381	-		Psyr_2662	0.73	+1.4
3,233,381	-		Psyr_2662	0.73	-0.3
3,233,381	-		Psyr_2662	0.73	-2.8
3,233,388	-		Psyr_2662	0.74	-0.2
3,233,388	-		Psyr_2662	0.74	+1.4
3,233,388	-		Psyr_2662	0.74	-3.2
3,233,400	+		Psyr_2662	0.76	+3.6
3,233,400	+		Psyr_2662	0.76	+3.4
3,233,401	-		Psyr_2662	0.77	-0.7
3,233,469	-		Psyr_2662	0.89	-0.5
3,233,520	+				-1.2
3,233,520	+				-2.4
3,233,520	+				+0.8
3,233,520	+				-0.0
3,233,520	+				+1.8
3,233,520	+				-0.7
3,233,520	+				-0.2
3,233,520	+				+1.8
3,233,520	+				+0.8
3,233,521	-				-1.7
3,233,521	-				-3.8
3,233,521	-				-2.7
3,233,521	-				-2.4
3,233,521	-				+0.8
3,233,521	-				-2.5
3,233,521	-				+0.8
3,233,521	-				-3.8
3,233,522	+				+2.8
3,233,522	+				+0.8
3,233,523	-				-4.1
3,233,523	-				-2.0
3,233,523	-				+1.8
3,233,523	-				-0.2
3,233,523	-				+1.4
3,233,523	-				+3.3
3,233,622	+				+2.1
3,233,623	-				-0.2
3,233,640	+				-1.8
3,233,641	-				-0.2
3,233,641	-				-1.1
3,233,713	+				-3.8
3,233,714	-				+1.4
3,233,716	+				+2.1
3,233,716	+				-0.2
3,233,716	+				-4.2
3,233,716	+				-0.2
3,233,716	+				-2.2
3,233,717	-				+1.8
3,233,717	-				-1.6
3,233,717	-				-0.2
3,233,717	-				-1.6
3,233,717	-				-2.9
3,233,717	-				+2.1
3,233,722	+				+0.3
3,233,733	+				+1.8
3,233,733	+				-0.2
3,233,733	+				+1.4
3,233,733	+				+2.4
3,233,733	+				-1.8
3,233,763	-				+2.1
3,233,763	-				-0.6
3,233,763	-				-0.2
3,233,775	-				-1.7
3,233,797	+				+0.8
3,233,797	+				+0.8
3,233,814	+				-1.6
3,233,843	+				+1.6
3,233,843	+				-0.2
3,233,843	+				-0.2
3,233,843	+				-4.0
3,233,843	+				+1.4
3,233,843	+				-3.4
3,233,844	-				+2.1
3,233,847	+				-4.0
3,233,847	+				+2.4
3,233,847	+				-0.5
3,233,847	+				+2.1
3,233,847	+				-4.1
3,233,848	-				-2.5
3,233,848	-				-0.5
3,233,848	-				-0.9
3,233,942	+				-0.5
3,233,945	-				-2.2
3,233,945	-				+1.8
3,233,945	-				+2.4
3,233,945	-				-4.1
3,233,945	-				-2.2
3,233,962	+		Psyr_2663	0.14	-0.5
3,234,140	+		Psyr_2663	0.63	+0.8
3,234,140	+		Psyr_2663	0.63	-1.5
3,234,140	+		Psyr_2663	0.63	-0.2
3,234,140	+		Psyr_2663	0.63	+0.8
3,234,140	+		Psyr_2663	0.63	+1.4
3,234,140	+		Psyr_2663	0.63	-0.2
3,234,141	-		Psyr_2663	0.64	-3.8
3,234,141	-		Psyr_2663	0.64	+3.0
3,234,141	-		Psyr_2663	0.64	+2.1
3,234,154	+		Psyr_2663	0.67	+0.8
3,234,192	+		Psyr_2663	0.78	-0.6
3,234,192	+		Psyr_2663	0.78	-0.2
3,234,193	-		Psyr_2663	0.78	-3.1
3,234,225	+		Psyr_2663	0.87	+2.1
3,234,225	+		Psyr_2663	0.87	-3.2
3,234,225	+		Psyr_2663	0.87	-1.5
3,234,229	+		Psyr_2663	0.88	-1.5
3,234,229	+		Psyr_2663	0.88	-2.0
3,234,229	+		Psyr_2663	0.88	-1.7
3,234,230	-		Psyr_2663	0.88	+2.1
3,234,230	-		Psyr_2663	0.88	+1.4
3,234,230	-		Psyr_2663	0.88	+0.8
3,234,230	-		Psyr_2663	0.88	+1.8
3,234,273	+				-3.9
3,234,273	+				-3.8
3,234,273	+				-3.8
3,234,274	-				-3.8
3,234,274	-				-1.8
3,234,274	-				-5.2
3,234,327	+				+0.8
3,234,384	+				-2.0
3,234,384	+				-4.3
3,234,385	-				-1.2
3,234,385	-				+1.8
3,234,417	+				-0.2
3,234,417	+				-1.8
3,234,418	-				-2.5
3,234,418	-				-0.2