Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2599

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,050,585	-		Psyr_2598	0.85	-0.2
3,050,614	-		Psyr_2598	0.85	-0.0
3,050,617	+		Psyr_2598	0.85	+2.0
3,050,617	+		Psyr_2598	0.85	-3.1
3,050,840	+		Psyr_2598	0.89	-3.0
3,050,841	-		Psyr_2598	0.89	-0.6
3,051,063	-				+3.5
3,051,143	+				+2.8
3,051,143	+				+3.7
3,051,144	-				-4.2
3,051,144	-				+1.6
3,051,144	-				-2.0
3,051,211	+				-1.2
3,051,211	+				+4.2
3,051,211	+				+1.0
3,051,211	+				-0.4
3,051,211	+				+2.0
3,051,211	+				-0.4
3,051,212	-				-2.3
3,051,212	-				-5.0
3,051,239	+				+3.0
3,051,240	-				+4.5
3,051,320	+				-0.6
3,051,320	+				-1.4
3,051,320	+				+0.0
3,051,321	-				-1.0
3,051,321	-				-0.2
3,051,344	+				-1.6
3,051,344	+				+4.4
3,051,345	-				+1.6
3,051,345	-				+3.7
3,051,408	+				-0.8
3,051,464	-				-2.2
3,051,584	+				-0.5
3,051,584	+				-1.0
3,051,584	+				-3.7
3,051,584	+				+2.8
3,051,584	+				-2.0
3,051,585	-				-0.6
3,051,608	+		Psyr_2599	0.11	+2.6
3,051,785	-		Psyr_2599	0.26	+3.5
3,051,980	+		Psyr_2599	0.44	-0.0
3,051,980	+		Psyr_2599	0.44	-2.2
3,051,981	-		Psyr_2599	0.44	+1.0
3,051,981	-		Psyr_2599	0.44	+2.0
3,051,981	-		Psyr_2599	0.44	-2.1
3,051,981	-		Psyr_2599	0.44	+3.0
3,051,981	-		Psyr_2599	0.44	+2.8
3,052,295	+		Psyr_2599	0.72	+1.0
3,052,430	+		Psyr_2599	0.84	-0.7
3,052,430	+		Psyr_2599	0.84	-0.0
3,052,479	-		Psyr_2599	0.88	+2.0
3,052,479	-		Psyr_2599	0.88	+0.5
3,052,479	-		Psyr_2599	0.88	-3.0
3,052,574	+				-1.3
3,052,644	-				+1.6
3,052,668	-				-1.3
3,052,681	+				+1.0
3,052,681	+				+3.0
3,052,681	+				-4.1
3,052,681	+				+1.0
3,052,682	-				-3.5
3,052,682	-				-0.0
3,052,698	-				-3.8
3,052,728	+				-1.2
3,052,995	+		Psyr_2600	0.53	+2.3
3,052,996	-		Psyr_2600	0.54	+2.6
3,053,207	-				-1.5
3,053,238	-				+4.4
3,053,277	-				-4.5
3,053,286	+				-1.7
3,053,286	+				+3.7
3,053,286	+				-0.3
3,053,287	-				+0.5
3,053,301	-				-0.0
3,053,353	+				-0.8
3,053,353	+				-1.3
3,053,353	+				-2.8
3,053,353	+				-3.8
3,053,353	+				+3.7
3,053,353	+				+3.3
3,053,353	+				-0.0
3,053,353	+				-0.0
3,053,353	+				-1.2
3,053,354	-				+2.6
3,053,354	-				-2.0
3,053,354	-				-3.2
3,053,354	-				+3.3
3,053,354	-				+2.8
3,053,534	-				-1.6