Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2549

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,962,253	+		Psyr_2547	0.67	+0.1
2,962,254	-		Psyr_2547	0.67	+4.2
2,962,254	-		Psyr_2547	0.67	-2.4
2,962,266	+		Psyr_2547	0.68	+1.7
2,962,269	+		Psyr_2547	0.69	+0.1
2,962,270	-		Psyr_2547	0.69	-3.0
2,962,270	-		Psyr_2547	0.69	+2.1
2,962,270	-		Psyr_2547	0.69	-0.4
2,962,314	+		Psyr_2547	0.72	-5.0
2,962,315	-		Psyr_2547	0.73	-1.7
2,962,315	-		Psyr_2547	0.73	-2.5
2,962,444	-		Psyr_2547	0.83	-0.9
2,962,444	-		Psyr_2547	0.83	+2.1
2,962,454	-		Psyr_2547	0.84	-0.5
2,962,515	+		Psyr_2547	0.89	+0.1
2,962,515	+		Psyr_2547	0.89	+0.1
2,962,515	+		Psyr_2547	0.89	+0.1
2,962,670	+				-2.7
2,962,964	+		Psyr_2548	0.71	-1.2
2,962,979	+		Psyr_2548	0.77	+3.7
2,963,028	+				-0.2
2,963,028	+				+0.1
2,963,029	-				+0.1
2,963,112	+				-1.9
2,963,113	-				+3.4
2,963,114	+				+0.1
2,963,114	+				+0.1
2,963,114	+				-0.3
2,963,114	+				-4.5
2,963,115	-				+2.9
2,963,115	-				+0.1
2,963,115	-				-2.8
2,963,115	-				+1.1
2,963,242	+		Psyr_2549	0.12	+2.1
2,963,243	-		Psyr_2549	0.12	-3.5
2,963,254	-		Psyr_2549	0.13	+0.1
2,963,254	-		Psyr_2549	0.13	-3.6
2,963,282	-		Psyr_2549	0.15	+0.1
2,963,283	+		Psyr_2549	0.15	+0.1
2,963,284	-		Psyr_2549	0.16	-1.8
2,963,284	-		Psyr_2549	0.16	-2.6
2,963,284	-		Psyr_2549	0.16	-3.5
2,963,284	-		Psyr_2549	0.16	-3.4
2,963,284	-		Psyr_2549	0.16	-1.0
2,963,284	-		Psyr_2549	0.16	+0.1
2,963,284	-		Psyr_2549	0.16	-4.6
2,963,284	-		Psyr_2549	0.16	-2.8
2,963,284	-		Psyr_2549	0.16	-1.5
2,963,284	-		Psyr_2549	0.16	-1.1
2,963,284	-		Psyr_2549	0.16	-2.9
2,963,292	+		Psyr_2549	0.16	-3.2
2,963,293	-		Psyr_2549	0.16	+0.1
2,963,342	+		Psyr_2549	0.21	+1.7
2,963,343	-		Psyr_2549	0.21	+0.1
2,963,495	+		Psyr_2549	0.35	+3.4
2,963,543	+		Psyr_2549	0.40	+1.1
2,963,667	-		Psyr_2549	0.51	+1.1
2,963,934	-		Psyr_2549	0.76	-1.2
2,964,107	+				+0.7
2,964,107	+				+0.1
2,964,107	+				+1.7
2,964,166	+				+3.9
2,964,245	+		Psyr_2550	0.11	+0.6
2,964,245	+		Psyr_2550	0.11	+2.1
2,964,245	+		Psyr_2550	0.11	-2.9
2,964,245	+		Psyr_2550	0.11	-1.9
2,964,245	+		Psyr_2550	0.11	+0.1
2,964,245	+		Psyr_2550	0.11	-1.6
2,964,246	-		Psyr_2550	0.11	+2.9
2,964,246	-		Psyr_2550	0.11	+4.6
2,964,246	-		Psyr_2550	0.11	+0.1
2,964,246	-		Psyr_2550	0.11	+4.3
2,964,246	-		Psyr_2550	0.11	-4.2
2,964,246	-		Psyr_2550	0.11	-0.9
2,964,246	-		Psyr_2550	0.11	+1.3
2,964,317	-		Psyr_2550	0.24	+1.1
2,964,317	-		Psyr_2550	0.24	-3.0
2,964,317	-		Psyr_2550	0.24	-0.6
2,964,735	-				+0.1
2,964,802	-				-1.4
2,964,833	+				+2.9
2,964,834	-				+2.1
2,965,095	+		Psyr_2551	0.29	-0.5
2,965,096	-		Psyr_2551	0.29	-2.8