Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2523 and Psyr_2524 overlap by 26 nucleotides Psyr_2524 and Psyr_2525 are separated by 4 nucleotides Psyr_2525 and Psyr_2526 are separated by 4 nucleotides
Psyr_2523: Psyr_2523 - DNA polymerase III, alpha subunit, at 2,931,657 to 2,934,752
_2523
Psyr_2524: Psyr_2524 - conserved hypothetical protein, at 2,934,727 to 2,935,659
_2524
Psyr_2525: Psyr_2525 - Mg2+ transporter protein, CorA-like protein, at 2,935,664 to 2,936,593
_2525
Psyr_2526: Psyr_2526 - Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein, at 2,936,598 to 2,938,184
_2526
Position (kb)
2935
2936
2937 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2934.697 kb on - strand at 2934.782 kb on + strand at 2934.808 kb on - strand at 2934.808 kb on - strand at 2934.808 kb on - strand at 2934.808 kb on - strand at 2934.811 kb on + strand at 2934.811 kb on + strand at 2934.811 kb on + strand at 2934.811 kb on + strand at 2934.812 kb on - strand at 2934.812 kb on - strand at 2934.812 kb on - strand at 2934.812 kb on - strand at 2934.877 kb on + strand, within Psyr_2524 at 2935.235 kb on - strand, within Psyr_2524 at 2935.235 kb on - strand, within Psyr_2524 at 2935.384 kb on + strand, within Psyr_2524 at 2935.385 kb on - strand, within Psyr_2524 at 2935.385 kb on - strand, within Psyr_2524 at 2935.385 kb on - strand, within Psyr_2524 at 2935.385 kb on - strand, within Psyr_2524 at 2935.385 kb on - strand, within Psyr_2524 at 2935.385 kb on - strand, within Psyr_2524 at 2935.555 kb on + strand, within Psyr_2524 at 2935.555 kb on + strand, within Psyr_2524 at 2935.555 kb on + strand, within Psyr_2524 at 2935.556 kb on - strand, within Psyr_2524 at 2935.556 kb on - strand, within Psyr_2524 at 2935.556 kb on - strand, within Psyr_2524 at 2935.609 kb on + strand at 2935.609 kb on + strand at 2935.612 kb on - strand at 2935.877 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.945 kb on - strand, within Psyr_2525 at 2935.945 kb on - strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.073 kb on + strand, within Psyr_2525 at 2936.073 kb on + strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.190 kb on + strand, within Psyr_2525 at 2936.367 kb on + strand, within Psyr_2525 at 2936.367 kb on + strand, within Psyr_2525 at 2936.368 kb on - strand, within Psyr_2525 at 2936.368 kb on - strand, within Psyr_2525 at 2936.490 kb on - strand, within Psyr_2525 at 2936.663 kb on - strand at 2936.770 kb on + strand, within Psyr_2526 at 2936.771 kb on - strand, within Psyr_2526 at 2936.771 kb on - strand, within Psyr_2526 at 2936.771 kb on - strand, within Psyr_2526 at 2936.893 kb on + strand, within Psyr_2526 at 2936.893 kb on + strand, within Psyr_2526 at 2936.893 kb on + strand, within Psyr_2526 at 2936.894 kb on - strand, within Psyr_2526 at 2936.894 kb on - strand, within Psyr_2526 at 2936.923 kb on + strand, within Psyr_2526 at 2936.924 kb on - strand, within Psyr_2526 at 2936.975 kb on - strand, within Psyr_2526 at 2937.060 kb on - strand, within Psyr_2526 at 2937.223 kb on + strand, within Psyr_2526 at 2937.223 kb on + strand, within Psyr_2526 at 2937.224 kb on - strand, within Psyr_2526 at 2937.224 kb on - strand, within Psyr_2526 at 2937.307 kb on + strand, within Psyr_2526 at 2937.308 kb on - strand, within Psyr_2526 at 2937.373 kb on + strand, within Psyr_2526 at 2937.374 kb on - strand, within Psyr_2526
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 2,934,697 - -3.2 2,934,782 + +0.1 2,934,808 - +2.9 2,934,808 - -0.4 2,934,808 - +4.1 2,934,808 - +2.1 2,934,811 + +0.1 2,934,811 + -1.4 2,934,811 + -2.7 2,934,811 + +2.6 2,934,812 - -0.9 2,934,812 - -2.6 2,934,812 - +0.1 2,934,812 - +1.6 2,934,877 + Psyr_2524 0.16 +1.6 2,935,235 - Psyr_2524 0.54 -2.2 2,935,235 - Psyr_2524 0.54 -1.2 2,935,384 + Psyr_2524 0.70 +0.1 2,935,385 - Psyr_2524 0.71 -0.6 2,935,385 - Psyr_2524 0.71 +2.2 2,935,385 - Psyr_2524 0.71 -0.9 2,935,385 - Psyr_2524 0.71 -0.2 2,935,385 - Psyr_2524 0.71 -2.5 2,935,385 - Psyr_2524 0.71 +1.6 2,935,555 + Psyr_2524 0.89 +2.4 2,935,555 + Psyr_2524 0.89 -0.4 2,935,555 + Psyr_2524 0.89 +0.1 2,935,556 - Psyr_2524 0.89 -1.4 2,935,556 - Psyr_2524 0.89 -2.5 2,935,556 - Psyr_2524 0.89 -3.7 2,935,609 + +2.4 2,935,609 + +1.6 2,935,612 - -1.1 2,935,877 - Psyr_2525 0.23 +3.4 2,935,927 - Psyr_2525 0.28 +3.5 2,935,927 - Psyr_2525 0.28 +3.4 2,935,927 - Psyr_2525 0.28 +1.1 2,935,927 - Psyr_2525 0.28 -0.4 2,935,945 - Psyr_2525 0.30 -3.9 2,935,945 - Psyr_2525 0.30 -2.6 2,936,070 + Psyr_2525 0.44 +2.1 2,936,070 + Psyr_2525 0.44 +1.6 2,936,070 + Psyr_2525 0.44 -3.2 2,936,070 + Psyr_2525 0.44 -0.3 2,936,070 + Psyr_2525 0.44 +1.1 2,936,070 + Psyr_2525 0.44 -0.1 2,936,070 + Psyr_2525 0.44 +2.4 2,936,070 + Psyr_2525 0.44 +0.1 2,936,070 + Psyr_2525 0.44 -2.7 2,936,071 - Psyr_2525 0.44 +0.1 2,936,071 - Psyr_2525 0.44 +3.4 2,936,071 - Psyr_2525 0.44 +1.6 2,936,071 - Psyr_2525 0.44 +0.6 2,936,071 - Psyr_2525 0.44 -0.3 2,936,071 - Psyr_2525 0.44 +3.4 2,936,073 + Psyr_2525 0.44 +2.1 2,936,073 + Psyr_2525 0.44 -1.7 2,936,074 - Psyr_2525 0.44 +3.4 2,936,074 - Psyr_2525 0.44 +1.6 2,936,074 - Psyr_2525 0.44 +3.2 2,936,074 - Psyr_2525 0.44 +2.9 2,936,074 - Psyr_2525 0.44 +0.1 2,936,190 + Psyr_2525 0.57 +2.1 2,936,367 + Psyr_2525 0.76 +2.6 2,936,367 + Psyr_2525 0.76 -4.0 2,936,368 - Psyr_2525 0.76 -2.7 2,936,368 - Psyr_2525 0.76 -3.3 2,936,490 - Psyr_2525 0.89 +1.1 2,936,663 - -2.7 2,936,770 + Psyr_2526 0.11 -0.5 2,936,771 - Psyr_2526 0.11 +1.7 2,936,771 - Psyr_2526 0.11 +0.1 2,936,771 - Psyr_2526 0.11 -1.3 2,936,893 + Psyr_2526 0.19 +0.1 2,936,893 + Psyr_2526 0.19 -0.5 2,936,893 + Psyr_2526 0.19 +2.9 2,936,894 - Psyr_2526 0.19 +2.4 2,936,894 - Psyr_2526 0.19 +2.9 2,936,923 + Psyr_2526 0.20 +0.1 2,936,924 - Psyr_2526 0.21 +4.7 2,936,975 - Psyr_2526 0.24 +4.2 2,937,060 - Psyr_2526 0.29 -2.8 2,937,223 + Psyr_2526 0.39 +2.1 2,937,223 + Psyr_2526 0.39 +3.1 2,937,224 - Psyr_2526 0.39 +1.7 2,937,224 - Psyr_2526 0.39 +0.1 2,937,307 + Psyr_2526 0.45 -0.6 2,937,308 - Psyr_2526 0.45 +0.3 2,937,373 + Psyr_2526 0.49 -1.2 2,937,374 - Psyr_2526 0.49 -4.2
Or see this region's nucleotide sequence