Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2474

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,866,850	+		Psyr_2473	0.16	+1.7
2,866,850	+		Psyr_2473	0.16	+0.1
2,866,856	+		Psyr_2473	0.17	-4.2
2,866,856	+		Psyr_2473	0.17	+2.9
2,866,856	+		Psyr_2473	0.17	-2.0
2,866,856	+		Psyr_2473	0.17	+0.2
2,866,856	+		Psyr_2473	0.17	-2.5
2,866,857	-		Psyr_2473	0.17	+1.1
2,866,857	-		Psyr_2473	0.17	+1.5
2,866,857	-		Psyr_2473	0.17	+0.1
2,866,857	-		Psyr_2473	0.17	-2.4
2,866,857	-		Psyr_2473	0.17	-2.7
2,866,857	-		Psyr_2473	0.17	+1.1
2,866,940	+		Psyr_2473	0.26	+0.1
2,866,940	+		Psyr_2473	0.26	+0.1
2,866,940	+		Psyr_2473	0.26	+2.4
2,866,940	+		Psyr_2473	0.26	+0.1
2,866,940	+		Psyr_2473	0.26	-3.1
2,866,940	+		Psyr_2473	0.26	-2.6
2,866,940	+		Psyr_2473	0.26	+1.1
2,866,940	+		Psyr_2473	0.26	-4.4
2,866,940	+		Psyr_2473	0.26	+3.4
2,866,941	-		Psyr_2473	0.26	+0.1
2,866,941	-		Psyr_2473	0.26	-2.1
2,866,941	-		Psyr_2473	0.26	+1.1
2,866,941	-		Psyr_2473	0.26	-1.6
2,866,941	-		Psyr_2473	0.26	-0.8
2,867,031	+		Psyr_2473	0.36	+2.1
2,867,031	+		Psyr_2473	0.36	-1.1
2,867,037	+		Psyr_2473	0.36	+2.4
2,867,038	-		Psyr_2473	0.36	+1.4
2,867,118	-		Psyr_2473	0.45	-3.7
2,867,576	+				+2.4
2,867,577	-				-0.7
2,867,577	-				+0.1
2,867,667	+				+1.6
2,867,702	+				-1.9
2,867,702	+				+0.1
2,867,702	+				-3.8
2,867,702	+				-1.9
2,867,703	-				+2.4
2,867,724	-				+2.1
2,867,741	+				+3.5
2,867,741	+				-0.9
2,867,742	-				-2.2
2,867,742	-				+0.1
2,867,764	+				+2.9
2,867,765	-				+0.1
2,867,880	+				+3.7
2,867,880	+				+2.1
2,867,880	+				+0.1
2,867,881	-				+0.1
2,867,881	-				-2.1
2,867,881	-				-2.5
2,868,045	+		Psyr_2474	0.19	-1.7
2,868,046	-		Psyr_2474	0.19	-2.9
2,868,771	+		Psyr_2474	0.78	-3.9
2,868,771	+		Psyr_2474	0.78	-0.8
2,868,772	-		Psyr_2474	0.78	+2.1
2,868,918	+		Psyr_2474	0.90	+1.1
2,868,918	+		Psyr_2474	0.90	-5.3
2,868,918	+		Psyr_2474	0.90	+0.1
2,868,918	+		Psyr_2474	0.90	+2.4
2,868,918	+		Psyr_2474	0.90	+0.1
2,868,918	+		Psyr_2474	0.90	+0.1
2,868,924	+				+1.7
2,868,924	+				+2.1
2,868,924	+				+2.7
2,868,938	+				-3.8
2,868,938	+				-0.9
2,868,938	+				+1.7
2,868,938	+				+1.1
2,868,939	-				+0.1
2,868,939	-				+1.7
2,868,993	+				+2.7
2,868,994	-				-1.7
2,868,994	-				-0.2
2,869,008	+				-1.7
2,869,008	+				+1.7
2,869,008	+				-4.9
2,869,008	+				+0.1
2,869,008	+				+2.7
2,869,008	+				+2.4
2,869,008	+				+0.1
2,869,008	+				-1.5
2,869,008	+				-1.7
2,869,008	+				+0.1
2,869,008	+				+2.1
2,869,008	+				-2.7
2,869,009	-				+1.7
2,869,009	-				+1.1
2,869,009	-				-1.8
2,869,009	-				-3.2
2,869,009	-				+0.1
2,869,009	-				-1.0
2,869,009	-				+2.1
2,869,009	-				+1.1
2,869,009	-				+0.1
2,869,009	-				+2.4
2,869,009	-				+2.2
2,869,010	+				+0.3
2,869,010	+				-1.4
2,869,010	+				+0.1
2,869,011	-				-2.1
2,869,114	+				+2.9
2,869,257	-		Psyr_2475	0.15	+2.1
2,869,454	+		Psyr_2475	0.30	-1.1
2,869,455	-		Psyr_2475	0.30	+1.1
2,869,560	-		Psyr_2475	0.38	-2.4
2,869,560	-		Psyr_2475	0.38	+1.2
2,869,563	+		Psyr_2475	0.38	-0.1
2,869,563	+		Psyr_2475	0.38	-2.2
2,869,563	+		Psyr_2475	0.38	+2.1
2,869,564	-		Psyr_2475	0.38	-1.5
2,869,564	-		Psyr_2475	0.38	+1.1
2,869,564	-		Psyr_2475	0.38	+2.1
2,869,564	-		Psyr_2475	0.38	+3.1
2,869,564	-		Psyr_2475	0.38	-0.4
2,869,569	+		Psyr_2475	0.38	-0.7
2,869,569	+		Psyr_2475	0.38	-0.7
2,869,570	-		Psyr_2475	0.38	+1.1
2,869,815	+		Psyr_2475	0.57	+1.7
2,869,816	-		Psyr_2475	0.57	-0.5
2,869,842	+		Psyr_2475	0.59	-5.0
2,869,843	-		Psyr_2475	0.59	+3.4
2,869,843	-		Psyr_2475	0.59	+2.7