Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2453

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,840,657	+				+2.1
2,840,658	-				+2.1
2,840,658	-				-1.9
2,840,659	+				-5.3
2,840,660	-				-0.6
2,840,731	+				-2.7
2,840,733	+				-1.0
2,840,733	+				-1.9
2,840,733	+				-0.2
2,840,734	-				+0.1
2,840,734	-				-3.7
2,840,734	-				+0.1
2,840,734	-				+0.1
2,840,827	+				+3.1
2,840,827	+				-0.8
2,840,828	-				+2.1
2,840,905	+		Psyr_2452	0.16	+1.6
2,841,292	-		Psyr_2452	0.64	+3.2
2,841,453	+		Psyr_2452	0.83	-2.4
2,841,453	+		Psyr_2452	0.83	+2.6
2,841,453	+		Psyr_2452	0.83	+0.1
2,841,453	+		Psyr_2452	0.83	-0.8
2,841,453	+		Psyr_2452	0.83	+0.9
2,841,453	+		Psyr_2452	0.83	-2.1
2,841,453	+		Psyr_2452	0.83	-2.4
2,841,453	+		Psyr_2452	0.83	+4.1
2,841,453	+		Psyr_2452	0.83	-1.1
2,841,454	-		Psyr_2452	0.84	+0.1
2,841,454	-		Psyr_2452	0.84	+0.1
2,841,454	-		Psyr_2452	0.84	-4.2
2,841,454	-		Psyr_2452	0.84	+3.4
2,841,454	-		Psyr_2452	0.84	-4.0
2,841,454	-		Psyr_2452	0.84	+3.4
2,841,454	-		Psyr_2452	0.84	+2.4
2,841,454	-		Psyr_2452	0.84	+0.1
2,841,454	-		Psyr_2452	0.84	-0.2
2,841,588	+				+2.1
2,841,588	+				-1.1
2,841,588	+				-1.2
2,841,588	+				-1.2
2,841,588	+				+2.6
2,841,588	+				+2.4
2,841,589	-				+0.1
2,841,589	-				+1.1
2,841,589	-				-4.5
2,841,589	-				-4.6
2,841,589	-				-1.9
2,841,589	-				-1.2
2,841,589	-				+2.1
2,841,624	+				+1.6
2,841,624	+				-1.4
2,841,624	+				-0.1
2,841,625	-				+2.1
2,841,625	-				-2.3
2,841,818	+		Psyr_2453	0.23	+0.6
2,841,818	+		Psyr_2453	0.23	+2.9
2,841,818	+		Psyr_2453	0.23	-2.4
2,841,819	-		Psyr_2453	0.23	+0.1
2,841,819	-		Psyr_2453	0.23	+0.1
2,842,052	-		Psyr_2453	0.51	+1.1
2,842,133	+		Psyr_2453	0.61	+2.9
2,842,133	+		Psyr_2453	0.61	-3.8
2,842,133	+		Psyr_2453	0.61	-0.8
2,842,133	+		Psyr_2453	0.61	-3.4
2,842,133	+		Psyr_2453	0.61	+1.6
2,842,133	+		Psyr_2453	0.61	-0.6
2,842,134	-		Psyr_2453	0.61	-0.8
2,842,134	-		Psyr_2453	0.61	-1.0
2,842,134	-		Psyr_2453	0.61	-3.1
2,842,134	-		Psyr_2453	0.61	-2.8
2,842,134	-		Psyr_2453	0.61	-0.7
2,842,134	-		Psyr_2453	0.61	-4.8
2,842,416	-				+0.1
2,842,416	-				-6.0
2,842,461	-				-3.6
2,842,466	+				+4.6
2,842,548	+		Psyr_2454	0.14	+2.1
2,842,548	+		Psyr_2454	0.14	-3.1
2,842,549	-		Psyr_2454	0.14	+2.4
2,842,549	-		Psyr_2454	0.14	-2.5
2,842,549	-		Psyr_2454	0.14	-0.0
2,842,593	+		Psyr_2454	0.19	-1.0
2,842,593	+		Psyr_2454	0.19	+1.1
2,842,593	+		Psyr_2454	0.19	-0.9
2,842,593	+		Psyr_2454	0.19	+1.1
2,842,594	-		Psyr_2454	0.19	+1.6
2,842,594	-		Psyr_2454	0.19	-3.5
2,842,594	-		Psyr_2454	0.19	+0.8
2,842,594	-		Psyr_2454	0.19	-2.5
2,842,594	-		Psyr_2454	0.19	-0.3
2,842,594	-		Psyr_2454	0.19	-0.3
2,842,756	-		Psyr_2454	0.39	+2.1
2,842,851	+		Psyr_2454	0.50	-1.4
2,842,851	+		Psyr_2454	0.50	-1.7
2,842,852	-		Psyr_2454	0.50	+3.4
2,842,852	-		Psyr_2454	0.50	-1.2
2,842,852	-		Psyr_2454	0.50	-0.6
2,842,852	-		Psyr_2454	0.50	+1.1
2,842,912	-		Psyr_2454	0.57	+4.4
2,842,912	-				+0.1
2,843,001	+		Psyr_2454	0.68	-1.8
2,843,001	+		Psyr_2454	0.68	+1.6
2,843,136	-		Psyr_2454	0.84	+1.6
2,843,276	-				-0.9
2,843,284	+				+1.6
2,843,284	+				-2.7
2,843,284	+				+3.4
2,843,284	+				-0.1
2,843,285	-				+3.2
2,843,285	-				+3.8
2,843,417	+		Psyr_2455	0.10	+2.6
2,843,418	-		Psyr_2455	0.10	+1.6
2,843,440	+		Psyr_2455	0.12	-0.9
2,843,440	+		Psyr_2455	0.12	+0.1
2,843,441	-		Psyr_2455	0.12	-0.2