Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2365 and Psyr_2366 are separated by 356 nucleotides Psyr_2366 and Psyr_2367 overlap by 4 nucleotides Psyr_2367 and Psyr_2368 are separated by 11 nucleotides
Psyr_2365: Psyr_2365 - Radical SAM, at 2,742,650 to 2,743,870
_2365
Psyr_2366: Psyr_2366 - ABC transporter, at 2,744,227 to 2,744,973
_2366
Psyr_2367: Psyr_2367 - ABC-3, at 2,744,970 to 2,745,839
_2367
Psyr_2368: Psyr_2368 - Periplasmic solute binding protein, at 2,745,851 to 2,746,747
_2368
Position (kb)
2744
2745 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 2743.284 kb on + strand, within Psyr_2365 at 2743.284 kb on + strand, within Psyr_2365 at 2743.284 kb on + strand, within Psyr_2365 at 2743.452 kb on + strand, within Psyr_2365 at 2743.453 kb on - strand, within Psyr_2365 at 2743.516 kb on - strand, within Psyr_2365 at 2743.575 kb on + strand, within Psyr_2365 at 2743.657 kb on - strand, within Psyr_2365 at 2743.726 kb on + strand, within Psyr_2365 at 2743.726 kb on + strand, within Psyr_2365 at 2743.727 kb on - strand, within Psyr_2365 at 2743.728 kb on + strand, within Psyr_2365 at 2743.728 kb on + strand, within Psyr_2365 at 2743.728 kb on + strand, within Psyr_2365 at 2743.728 kb on + strand, within Psyr_2365 at 2743.728 kb on + strand, within Psyr_2365 at 2743.728 kb on + strand, within Psyr_2365 at 2743.729 kb on - strand, within Psyr_2365 at 2743.729 kb on - strand, within Psyr_2365 at 2743.729 kb on - strand, within Psyr_2365 at 2743.729 kb on - strand, within Psyr_2365 at 2743.729 kb on - strand, within Psyr_2365 at 2743.729 kb on - strand, within Psyr_2365 at 2743.805 kb on - strand at 2743.824 kb on + strand at 2743.825 kb on - strand at 2743.825 kb on - strand at 2743.825 kb on - strand at 2743.825 kb on - strand at 2743.861 kb on + strand at 2743.892 kb on + strand at 2743.893 kb on - strand at 2743.981 kb on + strand at 2743.981 kb on + strand at 2743.982 kb on - strand at 2744.076 kb on - strand at 2744.076 kb on - strand at 2744.081 kb on + strand at 2744.188 kb on - strand at 2744.285 kb on + strand at 2744.285 kb on + strand at 2744.286 kb on - strand at 2744.979 kb on + strand at 2744.979 kb on + strand at 2744.979 kb on + strand at 2744.980 kb on - strand at 2745.286 kb on - strand, within Psyr_2367 at 2745.286 kb on - strand, within Psyr_2367 at 2745.355 kb on + strand, within Psyr_2367 at 2745.355 kb on + strand, within Psyr_2367 at 2745.355 kb on + strand, within Psyr_2367 at 2745.356 kb on - strand, within Psyr_2367 at 2745.396 kb on + strand, within Psyr_2367 at 2745.396 kb on + strand, within Psyr_2367 at 2745.396 kb on + strand, within Psyr_2367 at 2745.396 kb on + strand, within Psyr_2367 at 2745.396 kb on + strand, within Psyr_2367 at 2745.396 kb on + strand, within Psyr_2367 at 2745.397 kb on - strand, within Psyr_2367 at 2745.397 kb on - strand at 2745.397 kb on - strand, within Psyr_2367 at 2745.447 kb on + strand, within Psyr_2367 at 2745.448 kb on - strand, within Psyr_2367 at 2745.846 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 2,743,284 + Psyr_2365 0.52 -1.4 2,743,284 + Psyr_2365 0.52 -2.1 2,743,284 + Psyr_2365 0.52 +3.1 2,743,452 + Psyr_2365 0.66 +0.1 2,743,453 - Psyr_2365 0.66 +2.4 2,743,516 - Psyr_2365 0.71 -4.9 2,743,575 + Psyr_2365 0.76 +3.6 2,743,657 - Psyr_2365 0.82 +0.1 2,743,726 + Psyr_2365 0.88 -2.7 2,743,726 + Psyr_2365 0.88 +2.7 2,743,727 - Psyr_2365 0.88 -1.7 2,743,728 + Psyr_2365 0.88 +0.1 2,743,728 + Psyr_2365 0.88 -3.2 2,743,728 + Psyr_2365 0.88 +0.1 2,743,728 + Psyr_2365 0.88 +1.0 2,743,728 + Psyr_2365 0.88 -3.0 2,743,728 + Psyr_2365 0.88 -3.1 2,743,729 - Psyr_2365 0.88 -4.4 2,743,729 - Psyr_2365 0.88 +0.1 2,743,729 - Psyr_2365 0.88 +0.1 2,743,729 - Psyr_2365 0.88 -2.5 2,743,729 - Psyr_2365 0.88 +2.1 2,743,729 - Psyr_2365 0.88 +1.7 2,743,805 - -4.0 2,743,824 + -1.1 2,743,825 - +0.1 2,743,825 - -3.1 2,743,825 - +0.1 2,743,825 - -4.4 2,743,861 + +3.4 2,743,892 + +0.1 2,743,893 - -3.6 2,743,981 + -4.5 2,743,981 + +0.1 2,743,982 - -2.4 2,744,076 - +0.1 2,744,076 - +0.1 2,744,081 + -2.6 2,744,188 - -0.4 2,744,285 + +0.1 2,744,285 + +3.4 2,744,286 - +1.1 2,744,979 + -1.3 2,744,979 + +3.1 2,744,979 + -0.1 2,744,980 - +1.1 2,745,286 - Psyr_2367 0.36 +1.1 2,745,286 - Psyr_2367 0.36 +0.1 2,745,355 + Psyr_2367 0.44 +1.0 2,745,355 + Psyr_2367 0.44 +1.1 2,745,355 + Psyr_2367 0.44 +3.6 2,745,356 - Psyr_2367 0.44 +1.7 2,745,396 + Psyr_2367 0.49 -3.5 2,745,396 + Psyr_2367 0.49 -1.3 2,745,396 + Psyr_2367 0.49 -1.2 2,745,396 + Psyr_2367 0.49 +3.8 2,745,396 + Psyr_2367 0.49 -2.2 2,745,396 + Psyr_2367 0.49 +1.7 2,745,397 - Psyr_2367 0.49 +2.1 2,745,397 - -2.6 2,745,397 - Psyr_2367 0.49 -0.9 2,745,447 + Psyr_2367 0.55 +0.1 2,745,448 - Psyr_2367 0.55 -2.2 2,745,846 - -4.1
Or see this region's nucleotide sequence