Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2311

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,684,102	+		Psyr_2309	0.63	-3.9
2,684,112	+		Psyr_2309	0.64	+0.1
2,684,129	+		Psyr_2309	0.68	-2.8
2,684,150	+		Psyr_2309	0.71	-1.5
2,684,150	+		Psyr_2309	0.71	+2.7
2,684,284	+				+0.1
2,684,284	+				+3.1
2,684,285	-				+0.1
2,684,285	-				-2.7
2,684,309	-				+0.1
2,684,367	-				+0.1
2,684,416	+				+2.7
2,684,417	-				-0.4
2,684,597	+				-2.7
2,684,598	-				+0.3
2,684,654	+		Psyr_2310	0.19	-2.8
2,684,654	+		Psyr_2310	0.19	-3.5
2,684,654	+		Psyr_2310	0.19	+0.1
2,684,654	+		Psyr_2310	0.19	+0.1
2,684,655	-		Psyr_2310	0.19	+0.1
2,684,655	-		Psyr_2310	0.19	+4.6
2,684,655	-		Psyr_2310	0.19	-1.7
2,684,655	-		Psyr_2310	0.19	+0.1
2,684,770	+		Psyr_2310	0.56	-2.1
2,684,771	-		Psyr_2310	0.57	+1.7
2,684,898	+				-2.3
2,684,899	-				-1.0
2,684,926	+				+2.7
2,684,927	-				+1.7
2,684,927	-				+0.8
2,684,929	-				+1.1
2,684,929	-				-4.5
2,684,954	+				-4.1
2,684,955	-				+0.9
2,685,202	-		Psyr_2311	0.23	+1.3
2,685,202	-		Psyr_2311	0.23	-3.7
2,685,202	-		Psyr_2311	0.23	+0.8
2,685,259	-		Psyr_2311	0.30	+0.4
2,685,283	-		Psyr_2311	0.33	-1.2
2,685,339	+		Psyr_2311	0.39	-1.2
2,685,429	+		Psyr_2311	0.50	+1.2
2,685,430	-		Psyr_2311	0.50	+0.2
2,685,430	-		Psyr_2311	0.50	-1.2
2,685,430	-		Psyr_2311	0.50	-0.5
2,685,490	-		Psyr_2311	0.57	+0.9
2,685,703	-		Psyr_2311	0.82	+0.1
2,685,900	+				+2.1
2,685,900	+				+1.7
2,685,900	+				+1.1
2,685,901	-				-3.1
2,685,901	-				+0.1
2,685,901	-				-2.8
2,685,901	-				-1.3
2,685,922	+				+2.1
2,685,926	+				+3.8
2,685,926	+				-3.5
2,685,927	-				+0.4
2,685,927	-				+1.1
2,685,940	+				-1.2
2,685,940	+				-2.0
2,686,166	-		Psyr_2312	0.47	+4.0
2,686,480	+				-3.1
2,686,501	+				+0.1
2,686,501	+				+2.1
2,686,501	+				-3.2
2,686,502	-				+1.1
2,686,503	+				+0.1
2,686,503	+				-0.2
2,686,503	+				-3.6
2,686,504	-				-3.4
2,686,505	+				-3.4
2,686,505	+				-3.2
2,686,505	+				+0.1
2,686,505	+				-3.9
2,686,505	+				+0.1
2,686,505	+				+1.1
2,686,505	+				+0.1
2,686,505	+				-3.5
2,686,505	+				+1.1
2,686,505	+				+0.1
2,686,505	+				+0.1
2,686,505	+				+1.7
2,686,505	+				+1.1
2,686,505	+				+3.3
2,686,506	-				-2.8
2,686,506	-				-1.2
2,686,506	-				+2.9
2,686,506	-				-0.7
2,686,506	-				+0.1
2,686,506	-				-1.2
2,686,506	-				+3.4
2,686,506	-				-2.2
2,686,506	-				+0.1
2,686,506	-				+1.7
2,686,506	-				-1.5
2,686,506	-				+1.7
2,686,506	-				+0.1
2,686,506	-				-2.9
2,686,506	-				-1.2
2,686,506	-				-1.5
2,686,506	-				+0.1
2,686,546	+				-1.8
2,686,668	+				+0.1
2,686,668	+				-3.8
2,686,669	-				+1.7
2,686,669	-				+0.1
2,686,669	-				+0.1