Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2309

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,682,862	+		Psyr_2306	0.81	-0.6
2,682,863	-		Psyr_2306	0.81	-2.0
2,682,923	-		Psyr_2306	0.85	-1.3
2,683,244	+		Psyr_2307	0.45	-0.9
2,683,307	+		Psyr_2307	0.73	-1.7
2,683,307	+		Psyr_2307	0.73	-1.9
2,683,307	+		Psyr_2307	0.73	+1.7
2,683,307	+		Psyr_2307	0.73	+0.1
2,683,307	+		Psyr_2307	0.73	-2.2
2,683,307	+		Psyr_2307	0.73	-1.7
2,683,307	+		Psyr_2307	0.73	+1.7
2,683,307	+		Psyr_2307	0.73	+0.1
2,683,307	+		Psyr_2307	0.73	+0.1
2,683,308	-		Psyr_2307	0.74	+4.4
2,683,308	-		Psyr_2307	0.74	-2.3
2,683,308	-		Psyr_2307	0.74	-4.5
2,683,308	-		Psyr_2307	0.74	-3.5
2,683,308	-		Psyr_2307	0.74	-0.6
2,683,308	-		Psyr_2307	0.74	+2.7
2,683,356	+				-0.0
2,683,356	+				+0.1
2,683,356	+				+2.7
2,683,356	+				-1.5
2,683,356	+				+0.5
2,683,356	+				+1.7
2,683,356	+				+2.1
2,683,357	-				+0.1
2,683,357	-				+1.7
2,683,357	-				-3.4
2,683,357	-				+2.9
2,683,357	-				-2.5
2,683,357	-				-4.0
2,683,376	+				-2.0
2,683,377	-				-3.2
2,683,392	+				+0.1
2,683,392	+				-1.0
2,683,392	+				+2.9
2,683,393	-				+0.1
2,683,395	+				+1.1
2,683,453	+				+0.1
2,683,457	+				-1.5
2,683,457	+				-0.1
2,683,458	-				+1.3
2,683,458	-				-2.9
2,683,497	-				-3.6
2,683,675	-		Psyr_2308	0.88	+2.4
2,683,692	+				+1.7
2,683,692	+				-0.4
2,683,692	+				-0.5
2,683,692	+				-1.0
2,683,693	-				+0.1
2,683,928	+		Psyr_2309	0.31	-2.1
2,683,928	+		Psyr_2309	0.31	-2.1
2,683,928	+		Psyr_2309	0.31	+2.7
2,683,929	-		Psyr_2309	0.31	-3.4
2,683,929	-		Psyr_2309	0.31	-2.1
2,683,929	-		Psyr_2309	0.31	+2.1
2,683,929	-		Psyr_2309	0.31	+1.7
2,683,929	-		Psyr_2309	0.31	+0.1
2,684,102	+		Psyr_2309	0.63	-3.9
2,684,112	+		Psyr_2309	0.64	+0.1
2,684,129	+		Psyr_2309	0.68	-2.8
2,684,150	+		Psyr_2309	0.71	-1.5
2,684,150	+		Psyr_2309	0.71	+2.7
2,684,284	+				+0.1
2,684,284	+				+3.1
2,684,285	-				+0.1
2,684,285	-				-2.7
2,684,309	-				+0.1
2,684,367	-				+0.1
2,684,416	+				+2.7
2,684,417	-				-0.4
2,684,597	+				-2.7
2,684,598	-				+0.3
2,684,654	+		Psyr_2310	0.19	-2.8
2,684,654	+		Psyr_2310	0.19	-3.5
2,684,654	+		Psyr_2310	0.19	+0.1
2,684,654	+		Psyr_2310	0.19	+0.1
2,684,655	-		Psyr_2310	0.19	+0.1
2,684,655	-		Psyr_2310	0.19	+4.6
2,684,655	-		Psyr_2310	0.19	-1.7
2,684,655	-		Psyr_2310	0.19	+0.1
2,684,770	+		Psyr_2310	0.56	-2.1
2,684,771	-		Psyr_2310	0.57	+1.7
2,684,898	+				-2.3
2,684,899	-				-1.0
2,684,926	+				+2.7
2,684,927	-				+1.7
2,684,927	-				+0.8
2,684,929	-				+1.1
2,684,929	-				-4.5
2,684,954	+				-4.1
2,684,955	-				+0.9
2,685,202	-		Psyr_2311	0.23	+1.3
2,685,202	-		Psyr_2311	0.23	-3.7
2,685,202	-		Psyr_2311	0.23	+0.8
2,685,259	-		Psyr_2311	0.30	+0.4
2,685,283	-		Psyr_2311	0.33	-1.2