Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2222

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,581,421	+		Psyr_2220	0.90	-1.7
2,581,421	+		Psyr_2220	0.90	+1.7
2,581,421	+		Psyr_2220	0.90	-2.2
2,581,422	-		Psyr_2220	0.90	+0.1
2,581,422	-		Psyr_2220	0.90	+0.1
2,581,422	-		Psyr_2220	0.90	-1.9
2,581,438	-				-4.0
2,581,559	-				+3.5
2,581,559	-				+1.6
2,581,562	-				+0.1
2,581,668	+				+2.7
2,581,709	-				+0.1
2,581,709	-				+0.1
2,581,715	+				+2.5
2,581,735	+				+0.1
2,581,736	-				+2.1
2,581,821	+				-0.0
2,581,835	+				-2.6
2,581,835	+				+0.1
2,581,835	+				-2.3
2,581,835	+				+3.5
2,581,835	+				+0.1
2,581,836	-				-1.8
2,581,836	-				+1.1
2,581,836	-				+3.1
2,581,836	-				+1.4
2,581,836	-				+0.1
2,581,836	-				+0.2
2,581,840	-				+0.6
2,581,887	+				-1.4
2,581,887	+				+2.5
2,581,887	+				-1.9
2,581,887	+				-0.2
2,581,888	-				+2.9
2,581,888	-				+2.5
2,582,109	+		Psyr_2221	0.48	+0.1
2,582,194	-		Psyr_2221	0.63	-1.6
2,582,354	+				-2.2
2,582,535	+				+0.1
2,582,828	+		Psyr_2222	0.14	+0.1
2,582,828	+		Psyr_2222	0.14	+2.1
2,582,828	+		Psyr_2222	0.14	+2.5
2,583,016	-		Psyr_2222	0.21	+2.1
2,583,174	+		Psyr_2222	0.26	+2.5
2,583,175	-		Psyr_2222	0.26	-0.6
2,583,210	+		Psyr_2222	0.28	+2.7
2,583,210	+		Psyr_2222	0.28	+3.7
2,583,211	-		Psyr_2222	0.28	+3.5
2,583,327	+		Psyr_2222	0.32	-0.2
2,583,327	+		Psyr_2222	0.32	-1.5
2,583,328	-		Psyr_2222	0.32	-0.9
2,583,417	-		Psyr_2222	0.35	+3.1
2,583,951	-		Psyr_2222	0.53	+2.5
2,583,951	-		Psyr_2222	0.53	+0.1
2,584,044	+		Psyr_2222	0.56	+2.9
2,584,080	+		Psyr_2222	0.58	+2.1
2,584,090	+		Psyr_2222	0.58	+0.1
2,584,091	-		Psyr_2222	0.58	+0.1
2,584,091	-		Psyr_2222	0.58	+2.7
2,584,092	+		Psyr_2222	0.58	+2.1
2,584,092	+		Psyr_2222	0.58	-3.0
2,584,093	-		Psyr_2222	0.58	+4.0
2,584,221	+		Psyr_2222	0.62	+1.5
2,584,221	+		Psyr_2222	0.62	+1.1
2,584,360	-		Psyr_2222	0.67	+2.9
2,584,413	+		Psyr_2222	0.69	+0.1
2,584,414	-		Psyr_2222	0.69	-1.1
2,584,537	-		Psyr_2222	0.73	-0.9
2,584,567	-		Psyr_2222	0.74	-1.3
2,584,567	-		Psyr_2222	0.74	+2.9
2,584,567	-		Psyr_2222	0.74	+3.3
2,584,567	-		Psyr_2222	0.74	+1.1
2,584,696	-		Psyr_2222	0.79	+0.6
2,584,696	-		Psyr_2222	0.79	-3.6
2,584,824	+		Psyr_2222	0.83	+2.9
2,584,825	-		Psyr_2222	0.83	-0.2
2,584,825	-		Psyr_2222	0.83	+0.1
2,584,825	-		Psyr_2222	0.83	+4.1
2,584,825	-		Psyr_2222	0.83	+1.0
2,584,840	-		Psyr_2222	0.84	+4.3
2,584,929	+		Psyr_2222	0.87	+0.1
2,584,929	+		Psyr_2222	0.87	-3.0
2,584,930	-		Psyr_2222	0.87	+1.0
2,584,945	-		Psyr_2222	0.87	+0.1
2,585,069	+				+0.6
2,585,070	-				-0.2
2,585,148	+				-1.9
2,585,148	+				-0.6
2,585,148	+				-0.5
2,585,148	+				-0.5
2,585,226	+				-1.5
2,585,226	+				-2.2
2,585,498	+		Psyr_2223	0.61	-0.6
2,585,499	-		Psyr_2223	0.61	-3.5
2,585,808	+		Psyr_2224	0.14	+0.1
2,585,808	+		Psyr_2224	0.14	+3.3
2,585,811	+		Psyr_2224	0.15	+0.1
2,585,812	-				+0.1
2,585,812	-		Psyr_2224	0.15	-2.6
2,585,847	+		Psyr_2224	0.17	-1.0
2,586,036	+		Psyr_2224	0.33	+0.1
2,586,036	+		Psyr_2224	0.33	+4.2
2,586,036	+		Psyr_2224	0.33	-1.6
2,586,037	-		Psyr_2224	0.33	-2.3
2,586,037	-		Psyr_2224	0.33	-0.5
2,586,037	-		Psyr_2224	0.33	+3.1
2,586,037	-		Psyr_2224	0.33	+2.7
2,586,252	-		Psyr_2224	0.50	+1.7
2,586,252	-		Psyr_2224	0.50	-0.9
2,586,252	-		Psyr_2224	0.50	+1.7
2,586,252	-		Psyr_2224	0.50	-1.0
2,586,252	-		Psyr_2224	0.50	-3.0