Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2181

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,534,259	+		Psyr_2180	0.15	+0.1
2,534,259	+		Psyr_2180	0.15	-1.8
2,534,449	+		Psyr_2180	0.35	+2.1
2,534,449	+		Psyr_2180	0.35	-3.5
2,534,515	-		Psyr_2180	0.42	+0.1
2,534,583	-		Psyr_2180	0.50	-3.7
2,534,910	-		Psyr_2180	0.85	+0.1
2,535,020	+				+2.1
2,535,021	-				-2.9
2,535,089	+				+0.1
2,535,089	+				-3.2
2,535,090	-				+0.1
2,535,090	-				+3.3
2,535,090	-				-3.5
2,535,090	-				-0.8
2,535,090	-				-4.3
2,535,102	-				+0.1
2,535,102	-				-2.7
2,535,110	+				-5.7
2,535,111	-				-0.3
2,535,290	-				+1.7
2,535,290	-				-1.9
2,535,290	-				+1.9
2,535,362	-		Psyr_2181	0.15	-0.9
2,535,387	+		Psyr_2181	0.17	+3.8
2,535,467	+		Psyr_2181	0.25	-0.8
2,535,468	-		Psyr_2181	0.25	-0.3
2,535,470	+		Psyr_2181	0.25	-1.2
2,535,470	+		Psyr_2181	0.25	-0.5
2,535,471	-		Psyr_2181	0.25	+1.7
2,535,471	-		Psyr_2181	0.25	-0.2
2,535,471	-		Psyr_2181	0.25	+0.1
2,535,471	-		Psyr_2181	0.25	+2.7
2,535,471	-		Psyr_2181	0.25	-1.7
2,535,471	-		Psyr_2181	0.25	-1.3
2,535,496	+		Psyr_2181	0.27	+4.2
2,535,496	+		Psyr_2181	0.27	-2.5
2,535,496	+		Psyr_2181	0.27	-0.5
2,535,497	-		Psyr_2181	0.27	-0.9
2,535,497	-		Psyr_2181	0.27	-1.1
2,535,497	-		Psyr_2181	0.27	+2.1
2,535,655	+		Psyr_2181	0.42	+0.1
2,535,665	+		Psyr_2181	0.43	-3.9
2,535,691	+		Psyr_2181	0.45	+1.7
2,535,691	+		Psyr_2181	0.45	+1.1
2,535,692	-		Psyr_2181	0.45	-0.9
2,535,728	+		Psyr_2181	0.48	+2.5
2,535,869	-		Psyr_2181	0.61	-2.2
2,535,935	+		Psyr_2181	0.67	-1.8
2,535,935	+		Psyr_2181	0.67	-3.0
2,535,936	-		Psyr_2181	0.67	-0.9
2,536,057	+		Psyr_2181	0.78	+2.9
2,536,058	-		Psyr_2181	0.78	-1.2
2,536,058	-		Psyr_2181	0.78	-2.9
2,536,129	+		Psyr_2181	0.84	+1.4
2,536,129	+		Psyr_2181	0.84	-0.5
2,536,129	+		Psyr_2181	0.84	-2.1
2,536,130	-		Psyr_2181	0.84	-4.5
2,536,130	-		Psyr_2181	0.84	-4.7
2,536,169	+		Psyr_2181	0.88	-3.2
2,536,169	+		Psyr_2181	0.88	-3.3
2,536,464	+				+2.1
2,536,465	-				-3.8
2,536,544	-				-4.5
2,536,601	+				+4.1
2,536,751	+				-1.3
2,536,752	-				-3.6
2,536,777	+				-4.4
2,536,778	-				+1.7
2,536,788	+				+2.1
2,536,808	+				+3.1
2,536,808	+				-2.2
2,536,809	-				-2.5
2,536,809	-				-0.2
2,536,947	+				-3.3
2,536,950	+				+1.7
2,536,975	-		Psyr_2182	0.15	-4.4
2,537,053	+		Psyr_2182	0.37	-3.6
2,537,054	-		Psyr_2182	0.37	-1.9
2,537,063	+		Psyr_2182	0.40	+0.1
2,537,063	+		Psyr_2182	0.40	+1.5
2,537,063	+		Psyr_2182	0.40	+0.1
2,537,063	+		Psyr_2182	0.40	-3.5
2,537,063	+		Psyr_2182	0.40	+0.1
2,537,063	+		Psyr_2182	0.40	+0.1
2,537,063	+		Psyr_2182	0.40	-2.2
2,537,063	+		Psyr_2182	0.40	-5.0
2,537,063	+		Psyr_2182	0.40	+0.1
2,537,063	+		Psyr_2182	0.40	+1.1
2,537,063	+		Psyr_2182	0.40	-3.0
2,537,063	+		Psyr_2182	0.40	-4.2
2,537,063	+		Psyr_2182	0.40	+2.5
2,537,063	+		Psyr_2182	0.40	+0.1
2,537,064	-		Psyr_2182	0.40	+1.1
2,537,064	-		Psyr_2182	0.40	+2.1
2,537,128	+		Psyr_2182	0.58	-5.3
2,537,129	-		Psyr_2182	0.58	-3.3
2,537,164	-		Psyr_2182	0.68	-3.6
2,537,164	-		Psyr_2182	0.68	-4.5
2,537,281	+				-3.2
2,537,281	+				+0.1
2,537,281	+				-2.9
2,537,281	+				+0.1
2,537,281	+				+0.1
2,537,281	+				-3.5
2,537,282	-				+0.1
2,537,282	-				-4.5
2,537,282	-				+0.1
2,537,282	-				-4.4
2,537,285	+				-3.0
2,537,285	+				+0.5
2,537,285	+				-3.0
2,537,285	+				-4.1
2,537,285	+				+0.1
2,537,285	+				+0.1
2,537,285	+				-0.2
2,537,285	+				-2.5
2,537,286	-				-2.7
2,537,286	-				-4.4
2,537,286	-				+0.1
2,537,286	-				+1.7
2,537,286	-				-3.3
2,537,286	-				+2.5
2,537,286	-				+0.1