Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2048

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,391,330	+		Psyr_2047	0.72	+0.1
2,391,493	-		Psyr_2047	0.82	+3.1
2,391,498	+		Psyr_2047	0.82	+1.1
2,391,498	+		Psyr_2047	0.82	-2.0
2,391,498	+		Psyr_2047	0.82	+2.1
2,391,499	-		Psyr_2047	0.82	+4.1
2,391,499	-		Psyr_2047	0.82	-0.7
2,391,499	-		Psyr_2047	0.82	+3.8
2,391,606	+		Psyr_2047	0.88	+3.4
2,391,607	-		Psyr_2047	0.88	+3.1
2,391,821	+				+3.6
2,391,821	+				-2.0
2,391,821	+				-4.3
2,391,822	-				-0.1
2,391,822	-				+2.1
2,391,822	-				+2.4
2,391,822	-				+0.1
2,391,822	-				+3.6
2,391,822	-				+1.1
2,391,822	-				+0.1
2,391,825	+				+0.3
2,391,825	+				+1.1
2,391,825	+				+0.1
2,391,826	-				-1.7
2,391,826	-				+0.4
2,391,826	-				+2.7
2,391,826	-				-2.6
2,391,829	-				+2.7
2,392,180	-		Psyr_2048	0.18	-2.5
2,392,180	-		Psyr_2048	0.18	-2.8
2,392,180	-		Psyr_2048	0.18	+1.7
2,392,180	-		Psyr_2048	0.18	+1.7
2,392,180	-		Psyr_2048	0.18	+3.7
2,392,817	-		Psyr_2048	0.48	-1.4
2,393,087	+		Psyr_2048	0.61	+2.7
2,393,088	-		Psyr_2048	0.61	+0.3
2,393,602	+		Psyr_2048	0.86	+3.7
2,393,602	+		Psyr_2048	0.86	-0.6
2,393,602	+		Psyr_2048	0.86	+0.6
2,393,765	+				-0.5
2,393,766	-				+2.1
2,393,812	+				+4.5
2,393,812	+				+4.6
2,393,813	-				-2.8
2,393,957	+				-1.3
2,393,957	+				+0.3
2,393,957	+				+0.1
2,393,957	+				+1.1
2,393,957	+				-2.5
2,393,957	+				+3.6
2,393,958	-				+0.1
2,393,958	-				+0.1
2,393,958	-				+3.3
2,394,079	+		Psyr_2049	0.28	-1.3
2,394,079	+		Psyr_2049	0.28	-1.5
2,394,080	-		Psyr_2049	0.28	-1.2
2,394,080	-		Psyr_2049	0.28	+2.7
2,394,458	+				+0.6
2,394,458	+				-1.9
2,394,458	+				-1.0
2,394,459	-				-0.8
2,394,471	+				+2.7
2,394,472	-				-0.9
2,394,472	-				+0.1
2,394,488	+				-1.6
2,394,534	+				+2.1
2,394,534	+				+1.1
2,394,534	+				-1.2
2,394,535	-				-2.9
2,394,535	-				-2.8
2,394,535	-				-2.5
2,394,550	+				+1.5
2,394,557	+				+0.1
2,394,558	-				+1.7
2,394,558	-				-4.7
2,394,692	+				-2.7
2,394,692	+				+0.1
2,394,692	+				+3.3
2,394,692	+				-3.4
2,394,692	+				-1.6
2,394,693	-				-1.6
2,394,693	-				+2.4
2,394,693	-				-0.7