Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1894

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,162,806	+		Psyr_1892	0.84	-4.3
2,162,806	+		Psyr_1892	0.84	-0.9
2,162,806	+		Psyr_1892	0.84	+0.1
2,162,806	+		Psyr_1892	0.84	+3.7
2,162,806	+		Psyr_1892	0.84	-2.7
2,162,810	+		Psyr_1892	0.85	-1.6
2,162,810	+		Psyr_1892	0.85	-1.9
2,162,892	+				+2.9
2,162,893	-				+1.1
2,162,909	+				-1.5
2,162,909	+				+1.0
2,162,910	-				+0.1
2,162,910	-				+1.7
2,162,910	-				+0.1
2,162,986	+				+2.4
2,163,141	+		Psyr_1893	0.18	-0.9
2,163,141	+		Psyr_1893	0.18	+0.1
2,163,141	+		Psyr_1893	0.18	+1.1
2,163,141	+		Psyr_1893	0.18	+1.1
2,163,141	+		Psyr_1893	0.18	-2.1
2,163,142	-		Psyr_1893	0.18	-2.6
2,163,142	-		Psyr_1893	0.18	+2.4
2,163,142	-		Psyr_1893	0.18	+0.1
2,163,142	-		Psyr_1893	0.18	+1.7
2,163,142	-		Psyr_1893	0.18	+0.1
2,163,142	-		Psyr_1893	0.18	-2.6
2,163,142	-		Psyr_1893	0.18	-0.9
2,163,142	-		Psyr_1893	0.18	+3.7
2,163,142	-		Psyr_1893	0.18	+2.7
2,163,466	+		Psyr_1893	0.75	-0.1
2,163,467	-		Psyr_1893	0.76	-3.8
2,163,551	+				+3.1
2,163,551	+				+3.8
2,163,619	+				+3.4
2,163,619	+				+0.2
2,163,619	+				+3.1
2,163,620	-				+1.1
2,163,796	+				-2.7
2,163,796	+				-0.2
2,163,796	+				+3.9
2,163,797	-				-3.1
2,163,797	-				+0.1
2,163,797	-				-2.3
2,164,263	+				+2.9
2,164,263	+		Psyr_1894	0.23	+2.7
2,164,264	-		Psyr_1894	0.24	+0.1
2,164,324	+		Psyr_1894	0.26	+0.1
2,164,409	+		Psyr_1894	0.29	-1.5
2,164,410	-		Psyr_1894	0.29	+1.7
2,164,410	-		Psyr_1894	0.29	+0.1
2,164,492	+		Psyr_1894	0.32	-0.2
2,164,664	-		Psyr_1894	0.38	-2.3
2,164,664	-		Psyr_1894	0.38	-4.7
2,164,664	-		Psyr_1894	0.38	-2.1
2,164,664	-		Psyr_1894	0.38	-3.1
2,164,664	-		Psyr_1894	0.38	-2.9
2,164,664	-		Psyr_1894	0.38	-3.3
2,164,664	-		Psyr_1894	0.38	-3.3
2,164,739	-		Psyr_1894	0.41	+1.1
2,164,759	+		Psyr_1894	0.42	+1.7
2,164,801	+		Psyr_1894	0.43	+0.1
2,164,801	+		Psyr_1894	0.43	-1.1
2,164,801	+		Psyr_1894	0.43	-2.4
2,164,802	-		Psyr_1894	0.43	-1.5
2,164,802	-		Psyr_1894	0.43	-1.9
2,165,225	-		Psyr_1894	0.59	+2.8
2,165,266	+		Psyr_1894	0.60	+0.1
2,165,626	+		Psyr_1894	0.73	-4.1
2,165,626	+		Psyr_1894	0.73	+0.1
2,165,626	+		Psyr_1894	0.73	+2.4
2,165,626	+		Psyr_1894	0.73	+0.1
2,165,627	-		Psyr_1894	0.73	-3.6
2,165,627	-		Psyr_1894	0.73	+0.1
2,165,627	-		Psyr_1894	0.73	+3.1
2,165,627	-		Psyr_1894	0.73	+0.1
2,165,627	-		Psyr_1894	0.73	-1.4
2,165,627	-		Psyr_1894	0.73	+0.1
2,165,627	-		Psyr_1894	0.73	+2.1
2,166,151	+				+2.1
2,166,151	+				-0.3
2,166,151	+				+1.1
2,166,151	+				-4.4
2,166,151	+				+2.1
2,166,151	+				+0.6
2,166,152	-				+0.1
2,166,152	-				+2.7
2,166,152	-				+0.1
2,166,152	-				+2.1
2,166,197	-				+2.1
2,166,280	+				-0.3
2,166,281	-				-3.3
2,166,315	+				+0.1
2,166,315	+				-2.2
2,166,428	+				-4.7
2,166,428	+				-1.1
2,166,429	-				+1.1
2,166,429	-				-0.2
2,166,432	+				+1.7
2,166,432	+				-2.3
2,166,432	+				-1.0
2,166,433	-				-2.7
2,166,433	-				-0.3
2,166,433	-				+3.8
2,166,433	-				-1.5
2,166,433	-				-1.5
2,166,487	+				+0.1
2,166,487	+				-4.1
2,166,487	+				+1.7
2,166,487	+				-5.0
2,166,488	-				+2.4
2,166,488	-				-4.7
2,166,488	-				-1.2
2,166,507	+		Psyr_1895	0.13	-4.1
2,166,731	-		Psyr_1895	0.56	-0.5
2,166,731	-		Psyr_1895	0.56	+1.1
2,166,731	-		Psyr_1895	0.56	-1.7
2,167,232	-				+1.1
2,167,338	+		Psyr_1896	0.11	-0.7
2,167,338	-		Psyr_1896	0.11	-0.7
2,167,339	-		Psyr_1896	0.11	-2.7
2,167,339	-		Psyr_1896	0.11	+0.1