Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1798

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,069,553	+		Psyr_1797	0.27	-2.9
2,069,554	-		Psyr_1797	0.27	+1.5
2,069,920	+		Psyr_1797	0.60	+2.9
2,069,920	+		Psyr_1797	0.60	-4.4
2,069,921	-		Psyr_1797	0.60	+2.7
2,069,921	-		Psyr_1797	0.60	+2.4
2,069,921	-		Psyr_1797	0.60	+0.1
2,070,114	+		Psyr_1797	0.77	+3.4
2,070,114	+		Psyr_1797	0.77	-1.9
2,070,114	+		Psyr_1797	0.77	+2.7
2,070,114	+		Psyr_1797	0.77	+4.7
2,070,114	+		Psyr_1797	0.77	-4.0
2,070,115	-		Psyr_1797	0.77	-1.5
2,070,115	-		Psyr_1797	0.77	-2.5
2,070,362	+				-1.6
2,070,484	+				-4.6
2,070,485	-				-4.1
2,070,489	-				+0.9
2,070,496	-				-3.3
2,070,517	+				-1.2
2,070,572	+				-1.6
2,070,572	+				-1.5
2,070,572	+				-0.5
2,070,573	-				-2.5
2,070,573	-				+0.1
2,070,573	-				-1.5
2,070,577	-				-1.4
2,070,638	+				-0.7
2,070,702	+				+0.1
2,070,838	+		Psyr_1798	0.15	-0.4
2,070,874	+		Psyr_1798	0.17	+0.1
2,071,249	+		Psyr_1798	0.35	+0.1
2,071,249	+		Psyr_1798	0.35	-0.1
2,071,249	+		Psyr_1798	0.35	+1.1
2,071,249	+		Psyr_1798	0.35	-3.2
2,071,249	+		Psyr_1798	0.35	+2.9
2,071,250	-		Psyr_1798	0.36	-0.6
2,071,250	-		Psyr_1798	0.36	+4.5
2,071,250	-		Psyr_1798	0.36	-3.2
2,071,250	-		Psyr_1798	0.36	-3.5
2,071,250	-		Psyr_1798	0.36	-1.1
2,071,250	-		Psyr_1798	0.36	-1.6
2,071,251	+		Psyr_1798	0.36	+1.7
2,071,354	+		Psyr_1798	0.41	-1.3
2,071,355	-		Psyr_1798	0.41	-0.2
2,071,527	-		Psyr_1798	0.49	-2.4
2,071,585	-		Psyr_1798	0.52	-0.3
2,071,877	+		Psyr_1798	0.66	+0.6
2,071,878	-		Psyr_1798	0.66	-2.3
2,072,254	-		Psyr_1798	0.85	-3.6
2,072,444	+				-2.2
2,072,445	-				+0.1
2,072,566	+				-1.0
2,072,744	+		Psyr_1799	0.15	+0.1
2,072,745	-		Psyr_1799	0.15	+3.1
2,072,795	+		Psyr_1799	0.21	-0.8
2,072,796	-		Psyr_1799	0.21	+4.2
2,072,796	-		Psyr_1799	0.21	+3.1
2,072,867	-		Psyr_1799	0.28	+4.5
2,073,016	-		Psyr_1799	0.44	-0.5
2,073,074	+		Psyr_1799	0.51	-0.5
2,073,074	+		Psyr_1799	0.51	+0.1
2,073,075	-		Psyr_1799	0.51	+0.3
2,073,075	-		Psyr_1799	0.51	+0.3
2,073,075	-		Psyr_1799	0.51	-0.3
2,073,254	+		Psyr_1799	0.70	+1.1
2,073,255	-		Psyr_1799	0.70	+3.4
2,073,524	+				+1.1
2,073,525	-				-4.9
2,073,525	-				-1.6
2,073,525	-				+2.7
2,073,546	-				+4.3