Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1793

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
2,053,433	+				-0.9
2,053,736	+				+1.7
2,053,737	-				-2.5
2,053,778	+				-0.5
2,053,778	+				+0.6
2,053,779	-				+0.1
2,053,779	-				-0.4
2,053,779	-				+2.9
2,053,784	+				-0.4
2,053,784	+				-3.0
2,053,784	+				+2.1
2,053,784	+				-0.4
2,053,784	+				-1.6
2,053,785	-				-0.5
2,053,785	-				-1.6
2,053,827	-				+1.2
2,053,829	+				-1.0
2,053,829	+				-0.6
2,053,829	+				+0.1
2,053,829	+				+0.1
2,053,829	+				+0.5
2,053,829	+				+0.1
2,053,830	-				+0.4
2,053,830	-				-1.5
2,053,832	+				+3.6
2,053,833	-				-3.7
2,053,892	+				-0.0
2,053,892	+				+0.1
2,053,892	+				+3.3
2,053,893	-				+0.1
2,053,893	-				+0.7
2,053,893	-				-1.3
2,053,893	-				+2.4
2,053,898	+				+4.2
2,053,898	+				-0.1
2,053,899	-				-0.6
2,053,919	+				-0.1
2,053,919	+				-4.0
2,053,920	-				-0.2
2,053,920	-				-4.1
2,053,980	-				+1.1
2,054,009	-				-2.6
2,054,253	+				+4.2
2,054,254	-				+0.1
2,054,260	-				+2.9
2,054,260	-				+0.1
2,054,260	-				-2.1
2,054,260	-				+3.1
2,054,270	-				-1.0
2,054,533	+				+1.1
2,054,533	+				-0.6
2,054,533	+				-3.0
2,054,533	+				+0.1
2,054,533	+				+2.9
2,054,534	-				-2.2
2,054,534	-				-4.8
2,054,534	-				+2.4
2,054,624	+				+1.1
2,054,624	+				-1.8
2,054,624	+				+2.9
2,054,624	+				+3.6
2,054,842	+		Psyr_1793	0.14	+3.9
2,054,843	-		Psyr_1793	0.14	+0.4
2,054,843	-		Psyr_1793	0.14	-1.3
2,054,843	-		Psyr_1793	0.14	+0.1
2,054,843	-		Psyr_1793	0.14	-0.1
2,054,855	-		Psyr_1793	0.14	+1.5
2,055,658	+		Psyr_1793	0.34	-0.6
2,055,658	+		Psyr_1793	0.34	+3.9
2,055,659	-		Psyr_1793	0.34	+2.7
2,055,659	-		Psyr_1793	0.34	-3.6
2,055,659	-		Psyr_1793	0.34	-3.7
2,055,659	-		Psyr_1793	0.34	+3.4
2,055,659	-		Psyr_1793	0.34	+2.9
2,055,797	+		Psyr_1793	0.37	+2.7
2,055,797	+		Psyr_1793	0.37	+3.6
2,055,798	-		Psyr_1793	0.37	+0.1
2,055,798	-		Psyr_1793	0.37	+3.3
2,055,798	-		Psyr_1793	0.37	+0.1
2,055,925	+		Psyr_1793	0.40	-1.2
2,055,925	+		Psyr_1793	0.40	+1.7
2,055,925	+		Psyr_1793	0.40	+1.7
2,055,926	-		Psyr_1793	0.41	-1.5
2,055,926	-		Psyr_1793	0.41	-2.5
2,055,926	-		Psyr_1793	0.41	+3.1
2,055,926	-		Psyr_1793	0.41	+2.9
2,056,072	+		Psyr_1793	0.44	-0.6
2,056,072	+		Psyr_1793	0.44	+2.7
2,056,072	+		Psyr_1793	0.44	+1.7
2,056,073	-		Psyr_1793	0.44	+2.0
2,056,117	-		Psyr_1793	0.45	+3.4
2,056,117	-		Psyr_1793	0.45	+2.4
2,056,188	-		Psyr_1793	0.47	+0.8
2,056,309	+		Psyr_1793	0.50	-1.6
2,056,309	+		Psyr_1793	0.50	+1.7
2,056,310	-		Psyr_1793	0.50	+2.7
2,056,310	-		Psyr_1793	0.50	+4.4
2,056,310	-		Psyr_1793	0.50	-1.1
2,056,310	-		Psyr_1793	0.50	+2.7
2,056,310	-		Psyr_1793	0.50	+1.0
2,056,318	+		Psyr_1793	0.50	+3.4
2,056,318	+		Psyr_1793	0.50	-1.4
2,056,318	+		Psyr_1793	0.50	+3.1
2,056,318	+		Psyr_1793	0.50	+0.1
2,056,318	+		Psyr_1793	0.50	+3.1
2,056,319	-		Psyr_1793	0.50	+3.3
2,056,319	-		Psyr_1793	0.50	-0.5
2,056,735	+		Psyr_1793	0.60	+0.1
2,056,736	-		Psyr_1793	0.60	+2.1
2,056,736	-		Psyr_1793	0.60	+2.9
2,056,779	-		Psyr_1793	0.61	-1.8
2,056,846	+		Psyr_1793	0.63	+4.2
2,056,847	-		Psyr_1793	0.63	+2.1
2,056,930	+		Psyr_1793	0.65	+1.1
2,056,930	+		Psyr_1793	0.65	+3.1
2,057,000	-		Psyr_1793	0.67	-3.3
2,057,284	+		Psyr_1793	0.74	+0.3
2,057,406	+		Psyr_1793	0.76	+2.9
2,057,423	-		Psyr_1793	0.77	+2.1
2,057,719	+		Psyr_1793	0.84	-0.5
2,057,720	-		Psyr_1793	0.84	-4.3
2,057,762	-		Psyr_1793	0.85	+0.1
2,057,833	+		Psyr_1793	0.87	-3.1
2,058,064	+				-1.3
2,058,097	+				-1.2
2,058,109	+				-1.3
2,058,109	+				+4.1
2,058,269	+				-1.6
2,058,439	+				+2.4
2,058,481	+				-0.3
2,058,482	-				-2.0
2,058,766	-				+1.1
2,058,766	-				+1.7
2,058,852	+				-2.3
2,058,852	+				-2.5
2,058,853	-				-0.1
2,058,853	-				+2.1
2,058,853	-				-1.4
2,059,283	+				-2.0
2,059,283	+				-1.1