Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1790 and Psyr_1791 are separated by 155 nucleotides Psyr_1791 and Psyr_1792 are separated by 614 nucleotides
Psyr_1790: Psyr_1790 - Aldo/keto reductase, at 2,042,710 to 2,043,705
_1790
Psyr_1791: Psyr_1791 - HAD-superfamily hydrolase, subfamily IA, variant 2, at 2,043,861 to 2,044,583
_1791
Psyr_1792: Psyr_1792 - Amino acid adenylation, at 2,045,198 to 2,054,263
_1792
Position (kb)
2043
2044
2045 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 2042.984 kb on - strand, within Psyr_1790 at 2043.081 kb on + strand, within Psyr_1790 at 2043.082 kb on - strand, within Psyr_1790 at 2043.082 kb on - strand, within Psyr_1790 at 2043.131 kb on + strand, within Psyr_1790 at 2043.131 kb on + strand, within Psyr_1790 at 2043.131 kb on + strand, within Psyr_1790 at 2043.132 kb on - strand, within Psyr_1790 at 2043.132 kb on - strand, within Psyr_1790 at 2043.203 kb on - strand, within Psyr_1790 at 2043.203 kb on - strand, within Psyr_1790 at 2043.203 kb on - strand, within Psyr_1790 at 2043.203 kb on - strand, within Psyr_1790 at 2043.203 kb on - strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.206 kb on + strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.207 kb on - strand, within Psyr_1790 at 2043.227 kb on + strand, within Psyr_1790 at 2043.228 kb on - strand, within Psyr_1790 at 2043.294 kb on - strand, within Psyr_1790 at 2043.326 kb on + strand, within Psyr_1790 at 2043.326 kb on + strand, within Psyr_1790 at 2043.326 kb on + strand, within Psyr_1790 at 2043.327 kb on - strand, within Psyr_1790 at 2043.327 kb on - strand, within Psyr_1790 at 2043.327 kb on - strand, within Psyr_1790 at 2043.327 kb on - strand, within Psyr_1790 at 2043.327 kb on - strand, within Psyr_1790 at 2043.492 kb on + strand, within Psyr_1790 at 2043.493 kb on - strand, within Psyr_1790 at 2043.513 kb on + strand, within Psyr_1790 at 2043.514 kb on - strand, within Psyr_1790 at 2043.514 kb on - strand, within Psyr_1790 at 2043.524 kb on + strand, within Psyr_1790 at 2043.528 kb on + strand, within Psyr_1790 at 2043.529 kb on - strand, within Psyr_1790 at 2043.529 kb on - strand, within Psyr_1790 at 2043.669 kb on + strand at 2043.694 kb on + strand at 2043.695 kb on - strand at 2043.695 kb on - strand at 2043.695 kb on - strand at 2043.695 kb on - strand at 2043.698 kb on + strand at 2043.699 kb on - strand at 2043.699 kb on - strand at 2043.755 kb on + strand at 2043.809 kb on - strand at 2043.828 kb on + strand at 2043.829 kb on - strand at 2043.881 kb on - strand at 2043.881 kb on - strand at 2043.901 kb on + strand at 2043.901 kb on + strand at 2043.901 kb on + strand at 2043.902 kb on - strand at 2044.338 kb on + strand, within Psyr_1791 at 2044.338 kb on + strand, within Psyr_1791 at 2044.338 kb on + strand, within Psyr_1791 at 2044.339 kb on - strand, within Psyr_1791 at 2044.339 kb on - strand, within Psyr_1791 at 2044.339 kb on - strand, within Psyr_1791 at 2044.339 kb on - strand, within Psyr_1791 at 2044.340 kb on + strand, within Psyr_1791 at 2044.359 kb on + strand, within Psyr_1791 at 2044.360 kb on - strand, within Psyr_1791 at 2044.979 kb on + strand at 2045.354 kb on + strand at 2045.393 kb on + strand at 2045.481 kb on + strand at 2045.501 kb on + strand at 2045.501 kb on + strand at 2045.501 kb on + strand at 2045.502 kb on - strand at 2045.502 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 2,042,984 - Psyr_1790 0.28 +1.4 2,043,081 + Psyr_1790 0.37 -2.1 2,043,082 - Psyr_1790 0.37 -2.0 2,043,082 - Psyr_1790 0.37 +2.9 2,043,131 + Psyr_1790 0.42 +2.4 2,043,131 + Psyr_1790 0.42 +1.7 2,043,131 + Psyr_1790 0.42 +0.1 2,043,132 - Psyr_1790 0.42 +1.1 2,043,132 - Psyr_1790 0.42 +3.3 2,043,203 - Psyr_1790 0.49 -1.5 2,043,203 - Psyr_1790 0.49 -1.6 2,043,203 - Psyr_1790 0.49 +4.1 2,043,203 - Psyr_1790 0.49 +3.9 2,043,203 - Psyr_1790 0.49 +0.1 2,043,206 + Psyr_1790 0.50 -2.3 2,043,206 + Psyr_1790 0.50 -1.5 2,043,206 + Psyr_1790 0.50 -3.8 2,043,206 + Psyr_1790 0.50 -0.6 2,043,206 + Psyr_1790 0.50 +4.4 2,043,206 + Psyr_1790 0.50 -2.7 2,043,206 + Psyr_1790 0.50 +0.1 2,043,206 + Psyr_1790 0.50 -0.6 2,043,206 + Psyr_1790 0.50 +1.7 2,043,206 + Psyr_1790 0.50 +0.9 2,043,206 + Psyr_1790 0.50 +0.4 2,043,206 + Psyr_1790 0.50 +2.1 2,043,207 - Psyr_1790 0.50 +2.7 2,043,207 - Psyr_1790 0.50 +3.3 2,043,207 - Psyr_1790 0.50 +2.7 2,043,207 - Psyr_1790 0.50 -1.3 2,043,207 - Psyr_1790 0.50 -2.7 2,043,207 - Psyr_1790 0.50 +2.1 2,043,207 - Psyr_1790 0.50 +3.6 2,043,207 - Psyr_1790 0.50 +2.0 2,043,207 - Psyr_1790 0.50 -1.8 2,043,207 - Psyr_1790 0.50 +0.5 2,043,207 - Psyr_1790 0.50 -1.4 2,043,207 - Psyr_1790 0.50 -2.6 2,043,227 + Psyr_1790 0.52 +2.9 2,043,228 - Psyr_1790 0.52 +4.4 2,043,294 - Psyr_1790 0.59 +1.0 2,043,326 + Psyr_1790 0.62 -1.2 2,043,326 + Psyr_1790 0.62 -2.8 2,043,326 + Psyr_1790 0.62 -1.9 2,043,327 - Psyr_1790 0.62 -0.1 2,043,327 - Psyr_1790 0.62 +3.7 2,043,327 - Psyr_1790 0.62 +0.6 2,043,327 - Psyr_1790 0.62 +0.1 2,043,327 - Psyr_1790 0.62 +0.1 2,043,492 + Psyr_1790 0.79 +2.4 2,043,493 - Psyr_1790 0.79 -0.1 2,043,513 + Psyr_1790 0.81 -1.4 2,043,514 - Psyr_1790 0.81 +2.4 2,043,514 - Psyr_1790 0.81 -0.7 2,043,524 + Psyr_1790 0.82 -2.7 2,043,528 + Psyr_1790 0.82 -0.1 2,043,529 - Psyr_1790 0.82 -1.5 2,043,529 - Psyr_1790 0.82 +3.1 2,043,669 + -2.9 2,043,694 + -2.2 2,043,695 - +0.1 2,043,695 - +0.5 2,043,695 - -1.7 2,043,695 - -1.2 2,043,698 + -0.0 2,043,699 - +1.1 2,043,699 - +1.7 2,043,755 + +1.1 2,043,809 - +0.6 2,043,828 + +1.7 2,043,829 - +3.3 2,043,881 - -0.5 2,043,881 - -0.1 2,043,901 + +3.4 2,043,901 + +5.3 2,043,901 + +0.1 2,043,902 - +2.1 2,044,338 + Psyr_1791 0.66 -2.9 2,044,338 + Psyr_1791 0.66 -3.0 2,044,338 + Psyr_1791 0.66 +1.1 2,044,339 - Psyr_1791 0.66 +1.7 2,044,339 - Psyr_1791 0.66 +0.1 2,044,339 - Psyr_1791 0.66 -2.2 2,044,339 - Psyr_1791 0.66 -3.2 2,044,340 + Psyr_1791 0.66 -3.5 2,044,359 + Psyr_1791 0.69 +1.1 2,044,360 - Psyr_1791 0.69 +2.7 2,044,979 + -1.0 2,045,354 + +3.8 2,045,393 + +2.4 2,045,481 + -2.3 2,045,501 + +3.4 2,045,501 + +3.1 2,045,501 + -1.6 2,045,502 - +2.9 2,045,502 - -4.1
Or see this region's nucleotide sequence