Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1701 and Psyr_1702 are separated by 433 nucleotides Psyr_1702 and Psyr_1703 are separated by 151 nucleotides
Psyr_1701: Psyr_1701 - membrane protein, putative, at 1,909,129 to 1,911,519
_1701
Psyr_1702: Psyr_1702 - regulatory protein, LuxR, at 1,911,953 to 1,912,669
_1702
Psyr_1703: Psyr_1703 - Fatty acid desaturase, at 1,912,821 to 1,913,873
_1703
Position (kb)
1911
1912
1913 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 1911.031 kb on + strand, within Psyr_1701 at 1911.146 kb on + strand, within Psyr_1701 at 1911.146 kb on + strand, within Psyr_1701 at 1911.147 kb on - strand, within Psyr_1701 at 1911.147 kb on - strand, within Psyr_1701 at 1911.147 kb on - strand, within Psyr_1701 at 1911.220 kb on + strand, within Psyr_1701 at 1911.221 kb on - strand, within Psyr_1701 at 1911.221 kb on - strand, within Psyr_1701 at 1911.221 kb on - strand, within Psyr_1701 at 1911.221 kb on - strand, within Psyr_1701 at 1911.221 kb on - strand, within Psyr_1701 at 1911.221 kb on - strand, within Psyr_1701 at 1911.227 kb on - strand, within Psyr_1701 at 1911.277 kb on + strand, within Psyr_1701 at 1911.278 kb on - strand, within Psyr_1701 at 1911.278 kb on - strand, within Psyr_1701 at 1911.280 kb on + strand, within Psyr_1701 at 1911.280 kb on + strand, within Psyr_1701 at 1911.280 kb on + strand, within Psyr_1701 at 1911.280 kb on + strand, within Psyr_1701 at 1911.688 kb on - strand at 1911.695 kb on + strand at 1911.738 kb on + strand at 1911.739 kb on - strand at 1911.762 kb on + strand at 1911.762 kb on + strand at 1911.890 kb on + strand at 1912.064 kb on + strand, within Psyr_1702 at 1912.066 kb on + strand, within Psyr_1702 at 1912.066 kb on + strand, within Psyr_1702 at 1912.067 kb on - strand, within Psyr_1702 at 1912.147 kb on + strand, within Psyr_1702 at 1912.147 kb on + strand, within Psyr_1702 at 1912.147 kb on + strand, within Psyr_1702 at 1912.216 kb on - strand, within Psyr_1702 at 1912.308 kb on - strand, within Psyr_1702 at 1912.336 kb on - strand, within Psyr_1702 at 1912.373 kb on - strand, within Psyr_1702 at 1912.432 kb on + strand, within Psyr_1702 at 1912.432 kb on + strand, within Psyr_1702 at 1912.433 kb on - strand, within Psyr_1702 at 1912.508 kb on + strand, within Psyr_1702 at 1912.508 kb on + strand, within Psyr_1702 at 1912.508 kb on + strand, within Psyr_1702 at 1912.508 kb on + strand, within Psyr_1702 at 1912.508 kb on + strand, within Psyr_1702 at 1912.509 kb on - strand, within Psyr_1702 at 1912.509 kb on - strand, within Psyr_1702 at 1912.513 kb on - strand, within Psyr_1702 at 1912.513 kb on - strand, within Psyr_1702 at 1912.557 kb on + strand, within Psyr_1702 at 1912.557 kb on + strand, within Psyr_1702 at 1912.641 kb on + strand at 1912.641 kb on + strand at 1912.667 kb on + strand at 1912.851 kb on - strand at 1912.897 kb on + strand at 1912.927 kb on + strand, within Psyr_1703 at 1912.928 kb on - strand, within Psyr_1703 at 1912.931 kb on + strand, within Psyr_1703 at 1912.932 kb on - strand, within Psyr_1703 at 1912.932 kb on - strand, within Psyr_1703 at 1912.932 kb on - strand, within Psyr_1703 at 1912.938 kb on + strand, within Psyr_1703 at 1913.012 kb on - strand, within Psyr_1703 at 1913.159 kb on + strand, within Psyr_1703 at 1913.187 kb on + strand, within Psyr_1703 at 1913.246 kb on - strand, within Psyr_1703 at 1913.275 kb on + strand, within Psyr_1703 at 1913.276 kb on - strand, within Psyr_1703 at 1913.276 kb on - strand, within Psyr_1703 at 1913.276 kb on - strand, within Psyr_1703 at 1913.293 kb on + strand, within Psyr_1703 at 1913.293 kb on + strand, within Psyr_1703 at 1913.294 kb on - strand, within Psyr_1703 at 1913.294 kb on - strand, within Psyr_1703 at 1913.307 kb on + strand, within Psyr_1703 at 1913.307 kb on + strand, within Psyr_1703 at 1913.387 kb on - strand, within Psyr_1703 at 1913.395 kb on + strand, within Psyr_1703 at 1913.403 kb on + strand, within Psyr_1703 at 1913.403 kb on + strand, within Psyr_1703 at 1913.404 kb on - strand, within Psyr_1703 at 1913.405 kb on + strand, within Psyr_1703 at 1913.406 kb on - strand, within Psyr_1703 at 1913.486 kb on + strand, within Psyr_1703 at 1913.488 kb on + strand, within Psyr_1703 at 1913.488 kb on + strand, within Psyr_1703 at 1913.488 kb on + strand, within Psyr_1703 at 1913.488 kb on + strand, within Psyr_1703 at 1913.489 kb on - strand, within Psyr_1703 at 1913.489 kb on - strand, within Psyr_1703 at 1913.561 kb on - strand, within Psyr_1703 at 1913.570 kb on - strand, within Psyr_1703 at 1913.644 kb on - strand, within Psyr_1703
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 1,911,031 + Psyr_1701 0.80 -5.2 1,911,146 + Psyr_1701 0.84 +3.4 1,911,146 + Psyr_1701 0.84 -1.8 1,911,147 - Psyr_1701 0.84 +0.6 1,911,147 - Psyr_1701 0.84 +1.1 1,911,147 - Psyr_1701 0.84 -1.5 1,911,220 + Psyr_1701 0.87 -3.4 1,911,221 - Psyr_1701 0.87 -4.7 1,911,221 - Psyr_1701 0.87 +1.6 1,911,221 - Psyr_1701 0.87 -0.6 1,911,221 - Psyr_1701 0.87 -2.7 1,911,221 - Psyr_1701 0.87 +1.6 1,911,221 - Psyr_1701 0.87 -4.3 1,911,227 - Psyr_1701 0.88 -0.9 1,911,277 + Psyr_1701 0.90 +3.1 1,911,278 - Psyr_1701 0.90 -0.4 1,911,278 - Psyr_1701 0.90 +3.4 1,911,280 + Psyr_1701 0.90 -3.1 1,911,280 + Psyr_1701 0.90 +0.1 1,911,280 + Psyr_1701 0.90 -2.1 1,911,280 + Psyr_1701 0.90 -2.3 1,911,688 - -2.5 1,911,695 + -3.2 1,911,738 + -3.0 1,911,739 - +1.6 1,911,762 + -2.5 1,911,762 + +0.1 1,911,890 + -5.0 1,912,064 + Psyr_1702 0.15 -3.4 1,912,066 + Psyr_1702 0.16 +0.1 1,912,066 + Psyr_1702 0.16 +0.1 1,912,067 - Psyr_1702 0.16 +0.1 1,912,147 + Psyr_1702 0.27 -2.4 1,912,147 + Psyr_1702 0.27 -3.8 1,912,147 + Psyr_1702 0.27 -1.2 1,912,216 - Psyr_1702 0.37 +0.1 1,912,308 - Psyr_1702 0.50 -2.2 1,912,336 - Psyr_1702 0.53 +0.6 1,912,373 - Psyr_1702 0.59 -0.3 1,912,432 + Psyr_1702 0.67 -0.3 1,912,432 + Psyr_1702 0.67 +2.6 1,912,433 - Psyr_1702 0.67 -3.1 1,912,508 + Psyr_1702 0.77 +0.1 1,912,508 + Psyr_1702 0.77 -2.7 1,912,508 + Psyr_1702 0.77 -0.4 1,912,508 + Psyr_1702 0.77 +0.1 1,912,508 + Psyr_1702 0.77 -4.2 1,912,509 - Psyr_1702 0.78 -4.7 1,912,509 - Psyr_1702 0.78 +0.1 1,912,513 - Psyr_1702 0.78 -3.8 1,912,513 - Psyr_1702 0.78 -2.5 1,912,557 + Psyr_1702 0.84 -3.2 1,912,557 + Psyr_1702 0.84 -2.4 1,912,641 + -1.4 1,912,641 + -1.7 1,912,667 + -5.2 1,912,851 - +3.4 1,912,897 + +2.1 1,912,927 + Psyr_1703 0.10 -1.5 1,912,928 - Psyr_1703 0.10 +2.9 1,912,931 + Psyr_1703 0.10 -1.7 1,912,932 - Psyr_1703 0.11 +2.1 1,912,932 - Psyr_1703 0.11 -1.1 1,912,932 - Psyr_1703 0.11 +0.1 1,912,938 + Psyr_1703 0.11 -1.1 1,913,012 - Psyr_1703 0.18 +2.9 1,913,159 + Psyr_1703 0.32 +0.1 1,913,187 + Psyr_1703 0.35 -1.4 1,913,246 - Psyr_1703 0.40 -0.9 1,913,275 + Psyr_1703 0.43 -1.4 1,913,276 - Psyr_1703 0.43 -0.4 1,913,276 - Psyr_1703 0.43 -4.5 1,913,276 - Psyr_1703 0.43 -3.4 1,913,293 + Psyr_1703 0.45 +0.1 1,913,293 + Psyr_1703 0.45 +0.1 1,913,294 - Psyr_1703 0.45 +1.6 1,913,294 - Psyr_1703 0.45 -4.1 1,913,307 + Psyr_1703 0.46 +0.1 1,913,307 + Psyr_1703 0.46 +3.2 1,913,387 - Psyr_1703 0.54 +1.6 1,913,395 + Psyr_1703 0.55 +3.4 1,913,403 + Psyr_1703 0.55 -1.1 1,913,403 + Psyr_1703 0.55 -2.4 1,913,404 - Psyr_1703 0.55 -2.1 1,913,405 + Psyr_1703 0.55 -1.3 1,913,406 - Psyr_1703 0.56 -2.3 1,913,486 + Psyr_1703 0.63 +0.1 1,913,488 + Psyr_1703 0.63 -1.7 1,913,488 + Psyr_1703 0.63 -0.4 1,913,488 + Psyr_1703 0.63 +2.1 1,913,488 + Psyr_1703 0.63 -3.9 1,913,489 - Psyr_1703 0.63 -3.4 1,913,489 - Psyr_1703 0.63 -0.4 1,913,561 - Psyr_1703 0.70 +0.1 1,913,570 - Psyr_1703 0.71 +2.1 1,913,644 - Psyr_1703 0.78 -2.7
Or see this region's nucleotide sequence