Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1576

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
1,770,369	+		Psyr_1574	0.87	-1.1
1,770,370	-		Psyr_1574	0.87	+1.2
1,770,370	-		Psyr_1574	0.87	+1.2
1,770,396	+		Psyr_1574	0.88	+2.2
1,770,397	-		Psyr_1574	0.88	+1.7
1,770,397	-		Psyr_1574	0.88	+2.7
1,770,399	+		Psyr_1574	0.88	+4.1
1,770,405	+		Psyr_1574	0.88	-1.3
1,770,406	-		Psyr_1574	0.88	-3.0
1,770,406	-		Psyr_1574	0.88	-3.9
1,770,580	-				+1.6
1,770,659	-				+1.2
1,770,678	+				+2.5
1,770,743	-				-0.0
1,770,763	+				+2.7
1,770,791	+				+5.1
1,770,920	-		Psyr_1575	0.30	+2.2
1,770,920	-		Psyr_1575	0.30	+1.2
1,770,920	-		Psyr_1575	0.30	-0.3
1,771,009	+		Psyr_1575	0.49	-3.2
1,771,010	-		Psyr_1575	0.49	+1.1
1,771,040	+		Psyr_1575	0.55	-0.2
1,771,040	+		Psyr_1575	0.55	+4.6
1,771,040	+		Psyr_1575	0.55	+3.3
1,771,040	+		Psyr_1575	0.55	-1.6
1,771,040	+		Psyr_1575	0.55	+2.2
1,771,040	+		Psyr_1575	0.55	+3.3
1,771,040	+		Psyr_1575	0.55	+2.5
1,771,040	+		Psyr_1575	0.55	+0.2
1,771,040	+		Psyr_1575	0.55	+2.2
1,771,040	+		Psyr_1575	0.55	-0.5
1,771,040	+		Psyr_1575	0.55	+2.2
1,771,040	+		Psyr_1575	0.55	+3.5
1,771,040	+		Psyr_1575	0.55	+0.7
1,771,040	+		Psyr_1575	0.55	+0.2
1,771,040	+		Psyr_1575	0.55	+4.7
1,771,040	+		Psyr_1575	0.55	+1.0
1,771,040	+		Psyr_1575	0.55	-1.7
1,771,040	+		Psyr_1575	0.55	+3.5
1,771,040	+		Psyr_1575	0.55	+0.3
1,771,040	+		Psyr_1575	0.55	+4.0
1,771,040	+		Psyr_1575	0.55	+0.2
1,771,040	+		Psyr_1575	0.55	+0.9
1,771,040	+		Psyr_1575	0.55	+3.7
1,771,040	+		Psyr_1575	0.55	+0.2
1,771,040	+		Psyr_1575	0.55	+1.9
1,771,040	+		Psyr_1575	0.55	+3.7
1,771,041	-		Psyr_1575	0.56	-1.4
1,771,041	-		Psyr_1575	0.56	-2.8
1,771,041	-		Psyr_1575	0.56	-4.8
1,771,041	-		Psyr_1575	0.56	-3.7
1,771,041	-		Psyr_1575	0.56	-0.3
1,771,041	-		Psyr_1575	0.56	+1.2
1,771,041	-		Psyr_1575	0.56	+0.3
1,771,041	-		Psyr_1575	0.56	-2.1
1,771,041	-		Psyr_1575	0.56	+2.2
1,771,041	-		Psyr_1575	0.56	+0.2
1,771,041	-		Psyr_1575	0.56	+0.8
1,771,041	-		Psyr_1575	0.56	+1.7
1,771,041	-		Psyr_1575	0.56	-0.9
1,771,041	-		Psyr_1575	0.56	+3.2
1,771,041	-		Psyr_1575	0.56	+3.2
1,771,041	-		Psyr_1575	0.56	+1.2
1,771,041	-		Psyr_1575	0.56	+2.5
1,771,041	-		Psyr_1575	0.56	-1.9
1,771,041	-		Psyr_1575	0.56	+1.4
1,771,041	-		Psyr_1575	0.56	+0.2
1,771,041	-		Psyr_1575	0.56	+0.7
1,771,041	-		Psyr_1575	0.56	-2.1
1,771,041	-		Psyr_1575	0.56	+4.5
1,771,045	+		Psyr_1575	0.56	+3.2
1,771,045	+		Psyr_1575	0.56	+1.6
1,771,045	+		Psyr_1575	0.56	+1.7
1,771,045	+		Psyr_1575	0.56	+3.3
1,771,045	+		Psyr_1575	0.56	+0.2
1,771,045	+		Psyr_1575	0.56	-3.9
1,771,045	+		Psyr_1575	0.56	+4.2
1,771,045	+		Psyr_1575	0.56	-1.6
1,771,045	+		Psyr_1575	0.56	-2.7
1,771,046	-		Psyr_1575	0.57	+3.0
1,771,046	-		Psyr_1575	0.57	+0.2
1,771,046	-		Psyr_1575	0.57	-2.9
1,771,046	-		Psyr_1575	0.57	-3.7
1,771,046	-		Psyr_1575	0.57	-2.1
1,771,046	-		Psyr_1575	0.57	-2.6
1,771,046	-		Psyr_1575	0.57	-0.7
1,771,187	+		Psyr_1575	0.86	-0.9
1,771,251	-				+2.3
1,771,339	+				+1.2
1,771,449	+		Psyr_1576	0.15	-2.4
1,771,450	-		Psyr_1576	0.15	+2.2
1,771,450	-		Psyr_1576	0.15	+4.0
1,771,559	+		Psyr_1576	0.29	+4.0
1,771,632	-		Psyr_1576	0.38	-1.8
1,771,827	-		Psyr_1576	0.62	-2.0
1,771,827	-		Psyr_1576	0.62	-2.4
1,771,883	+		Psyr_1576	0.69	-0.2
1,772,130	+				+1.4
1,772,131	-				+2.5
1,772,131	-				+2.5
1,772,149	-				-0.9
1,772,188	+				+0.2
1,772,257	+		Psyr_1577	0.15	-1.4
1,772,258	-		Psyr_1577	0.16	+2.7
1,772,312	-		Psyr_1577	0.26	+2.5
1,772,314	-		Psyr_1577	0.26	-3.5
1,772,368	+		Psyr_1577	0.37	+2.7
1,772,369	-		Psyr_1577	0.37	-1.7
1,772,547	+		Psyr_1577	0.71	-2.1
1,772,547	+		Psyr_1577	0.71	+2.5
1,772,547	+		Psyr_1577	0.71	-4.2
1,772,547	+		Psyr_1577	0.71	-1.2
1,772,547	+		Psyr_1577	0.71	-0.1
1,772,547	+		Psyr_1577	0.71	+0.2
1,772,547	+		Psyr_1577	0.71	+1.7
1,772,547	+		Psyr_1577	0.71	+1.2
1,772,547	+		Psyr_1577	0.71	-0.8
1,772,548	-		Psyr_1577	0.71	-0.1
1,772,548	-		Psyr_1577	0.71	-0.9
1,772,548	-		Psyr_1577	0.71	-5.2
1,772,548	-		Psyr_1577	0.71	+0.2
1,772,739	+				+3.3
1,772,739	+				-2.2
1,772,739	+				+0.2
1,772,739	+				+0.2
1,772,739	+				-1.9
1,772,739	+				+1.2
1,772,739	+				-4.4
1,772,739	+				-2.2
1,772,739	+				-1.5
1,772,740	-				+2.2
1,772,740	-				+0.2
1,772,740	-				-3.0
1,772,740	-				+1.7
1,772,740	-				-4.7
1,772,740	-				-0.1
1,772,740	-				-2.2
1,772,740	-				+1.2
1,772,740	-				+0.2
1,772,740	-				+3.2
1,772,741	+				-2.3
1,772,741	+				-1.0
1,772,741	+				-3.4
1,772,741	+				+0.2
1,772,741	+				+0.2
1,772,741	+				-1.0
1,772,741	+				+0.2
1,772,742	-				+1.2
1,772,742	-				+3.6
1,772,742	-				-0.4
1,772,742	-				-2.7
1,772,742	-				-3.0
1,772,761	+				-2.9
1,772,761	+				+3.5
1,772,761	+				+2.5
1,772,762	-				+2.5
1,772,762	-				-2.5
1,772,762	-				-2.2
1,772,765	+				+0.2
1,772,765	+				-1.3
1,772,765	+				+2.7
1,772,765	+				+0.2
1,772,765	+				-1.8
1,772,766	-				-5.3
1,772,766	-				+0.2
1,772,766	-				+2.2
1,772,766	-				-1.0
1,772,769	+				-0.6
1,772,888	+		Psyr_1578	0.21	+3.0
1,772,888	+		Psyr_1578	0.21	+0.1
1,772,888	+		Psyr_1578	0.21	-0.9
1,772,889	-		Psyr_1578	0.21	+0.1
1,772,889	-		Psyr_1578	0.21	+0.1
1,772,949	+		Psyr_1578	0.29	-0.9
1,772,949	+		Psyr_1578	0.29	-2.2
1,772,949	+		Psyr_1578	0.29	+2.1
1,772,950	-		Psyr_1578	0.30	-3.8
1,772,975	+		Psyr_1578	0.33	-0.4
1,772,976	-		Psyr_1578	0.33	-2.6
1,772,976	-		Psyr_1578	0.33	-2.2
1,773,062	+		Psyr_1578	0.45	-1.3
1,773,063	-		Psyr_1578	0.45	+3.5
1,773,063	-		Psyr_1578	0.45	+3.7
1,773,063	-		Psyr_1578	0.45	+2.4
1,773,063	-		Psyr_1578	0.45	+0.6
1,773,066	+		Psyr_1578	0.46	-2.2