Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1531

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
1,719,521	-				-2.1
1,719,521	-				+0.2
1,719,521	-				+1.2
1,719,521	-				+0.2
1,719,521	-				+3.2
1,719,613	+				-2.8
1,719,613	+				-2.0
1,719,613	+				-3.8
1,719,613	+				+4.5
1,719,613	+				+1.8
1,719,613	+				+3.2
1,719,613	+				+3.9
1,719,613	+				-2.8
1,719,613	+				+2.2
1,719,613	+				+3.6
1,719,613	+				+0.2
1,719,613	+				-1.1
1,719,613	+				-0.8
1,719,613	+				-1.8
1,719,613	+				+1.2
1,719,613	+				-0.5
1,719,614	-				-3.4
1,719,614	-				+0.2
1,719,614	-				+0.6
1,719,614	-				-1.0
1,719,614	-				-0.8
1,719,614	-				-0.8
1,719,614	-				+0.2
1,719,619	+				-1.3
1,719,619	+				-3.6
1,719,619	+				-0.2
1,719,619	+				-2.5
1,719,619	+				-2.6
1,719,619	+				-1.2
1,719,619	+				-2.6
1,719,619	+				+1.2
1,719,619	+				+0.2
1,719,619	+				+0.2
1,719,619	+				+0.4
1,719,619	+				+0.4
1,719,619	+				+3.0
1,719,619	+				+1.2
1,719,619	+				-0.7
1,719,619	+				-2.1
1,719,620	-				+0.9
1,719,620	-				-2.1
1,719,620	-				-0.3
1,719,620	-				+0.3
1,719,620	-				-2.0
1,719,620	-				-1.8
1,719,620	-				+2.8
1,719,620	-				-1.1
1,719,620	-				-4.0
1,719,620	-				-1.5
1,719,620	-				-1.5
1,719,620	-				-2.6
1,719,620	-				+2.8
1,719,620	-				-4.3
1,719,620	-				-3.6
1,719,620	-				+0.2
1,719,620	-				+0.2
1,719,620	-				+1.2
1,719,678	-		Psyr_1529	0.13	-2.1
1,719,689	-		Psyr_1529	0.16	-1.6
1,719,689	-		Psyr_1529	0.16	+1.8
1,719,868	-		Psyr_1529	0.60	+1.2
1,719,931	+		Psyr_1529	0.75	+1.2
1,719,931	+		Psyr_1529	0.75	+1.2
1,719,931	+		Psyr_1529	0.75	-2.6
1,719,931	+		Psyr_1529	0.75	+2.5
1,719,931	+		Psyr_1529	0.75	+2.2
1,719,932	-		Psyr_1529	0.75	-1.3
1,719,932	-		Psyr_1529	0.75	+1.2
1,719,932	-		Psyr_1529	0.75	+0.2
1,719,932	-		Psyr_1529	0.75	+0.2
1,719,932	-		Psyr_1529	0.75	+0.2
1,719,932	-		Psyr_1529	0.75	-2.3
1,719,932	-		Psyr_1529	0.75	-1.8
1,719,932	-		Psyr_1529	0.75	-3.1
1,719,932	-		Psyr_1529	0.75	+2.2
1,719,932	-		Psyr_1529	0.75	+0.2
1,719,935	+		Psyr_1529	0.76	+3.2
1,719,935	+		Psyr_1529	0.76	-4.6
1,719,935	+		Psyr_1529	0.76	-1.2
1,719,936	-		Psyr_1529	0.76	-3.5
1,719,936	-		Psyr_1529	0.76	+2.2
1,719,936	-		Psyr_1529	0.76	-1.4
1,720,014	+				-0.3
1,720,022	+				+0.1
1,720,023	-				+0.2
1,720,023	-				+0.2
1,720,023	-				+1.2
1,720,024	+				+4.2
1,720,024	+				-1.3
1,720,024	+				-4.4
1,720,024	+				+2.5
1,720,024	+				-0.2
1,720,024	+				+0.2
1,720,024	+				-0.6
1,720,024	+				+0.2
1,720,024	+				+2.5
1,720,024	+				+0.1
1,720,025	-				+1.8
1,720,025	-				+0.2
1,720,025	-				-1.4
1,720,025	-				-4.9
1,720,025	-				+1.0
1,720,025	-				+2.2
1,720,025	-				-3.3
1,720,025	-				+0.1
1,720,025	-				+2.8
1,720,025	-				+1.2
1,720,025	-				-2.6
1,720,025	-				+3.8
1,720,025	-				+0.9
1,720,025	-				-1.1
1,720,025	-				-4.1
1,720,144	+		Psyr_1530	0.32	+4.4
1,720,145	-		Psyr_1530	0.32	+1.2
1,720,145	-		Psyr_1530	0.32	+0.2
1,720,173	+		Psyr_1530	0.41	+1.8
1,720,173	+		Psyr_1530	0.41	-0.7
1,720,173	+		Psyr_1530	0.41	-1.7
1,720,174	-		Psyr_1530	0.41	-3.8
1,720,241	+		Psyr_1530	0.61	+2.5
1,720,346	+				-1.2
1,720,360	+				+2.5
1,720,523	+		Psyr_1531	0.11	-1.4
1,720,524	-		Psyr_1531	0.11	-2.1
1,720,524	-		Psyr_1531	0.11	-3.3
1,720,540	+		Psyr_1531	0.12	-2.7
1,720,540	+		Psyr_1531	0.12	+0.2
1,720,540	+		Psyr_1531	0.12	-2.6
1,720,540	+		Psyr_1531	0.12	-1.4
1,720,540	+		Psyr_1531	0.12	-1.0
1,720,541	-		Psyr_1531	0.13	+0.0
1,720,541	-		Psyr_1531	0.13	-2.1
1,720,541	-		Psyr_1531	0.13	-3.3
1,720,541	-		Psyr_1531	0.13	-1.8
1,720,602	+		Psyr_1531	0.17	-4.6
1,720,602	+		Psyr_1531	0.17	+3.0
1,720,602	+		Psyr_1531	0.17	+1.8
1,720,603	-		Psyr_1531	0.17	-1.5
1,720,603	-		Psyr_1531	0.17	-4.0
1,720,603	-		Psyr_1531	0.17	+1.2
1,720,702	+		Psyr_1531	0.24	-0.7
1,720,702	+		Psyr_1531	0.24	+2.2
1,720,702	+		Psyr_1531	0.24	-3.9
1,720,703	-		Psyr_1531	0.25	+0.2
1,720,703	-		Psyr_1531	0.25	-2.5
1,720,703	-		Psyr_1531	0.25	-2.2
1,720,735	-		Psyr_1531	0.27	+0.8
1,720,858	+		Psyr_1531	0.36	-2.8
1,720,858	+		Psyr_1531	0.36	-1.9
1,720,858	+		Psyr_1531	0.36	+2.2
1,720,858	+		Psyr_1531	0.36	-0.2
1,720,859	-		Psyr_1531	0.36	-4.0
1,720,859	-		Psyr_1531	0.36	-0.8
1,720,859	-		Psyr_1531	0.36	+2.8
1,720,859	-		Psyr_1531	0.36	+0.2
1,720,859	-				+0.2
1,720,875	-		Psyr_1531	0.37	+1.8
1,720,985	+		Psyr_1531	0.46	+1.2
1,720,985	+		Psyr_1531	0.46	-1.7
1,720,986	-		Psyr_1531	0.46	+0.2
1,721,041	-		Psyr_1531	0.50	-3.1
1,721,063	-		Psyr_1531	0.51	-2.0
1,721,134	+		Psyr_1531	0.57	-1.9
1,721,134	+		Psyr_1531	0.57	+3.0
1,721,135	-		Psyr_1531	0.57	-1.2
1,721,135	-		Psyr_1531	0.57	+0.2
1,721,135	-		Psyr_1531	0.57	+0.2
1,721,235	+		Psyr_1531	0.64	-1.4
1,721,235	+		Psyr_1531	0.64	-3.2
1,721,235	+		Psyr_1531	0.64	+0.4
1,721,367	-		Psyr_1531	0.74	+3.5
1,721,379	+		Psyr_1531	0.75	-1.0
1,721,380	-		Psyr_1531	0.75	+0.2
1,721,390	-		Psyr_1531	0.76	+1.2
1,721,390	-		Psyr_1531	0.76	+0.2
1,721,420	+		Psyr_1531	0.78	+0.2
1,721,420	+		Psyr_1531	0.78	+2.8
1,721,421	-		Psyr_1531	0.78	+3.3
1,721,471	+		Psyr_1531	0.82	-0.0
1,721,494	+		Psyr_1531	0.83	+0.2
1,721,494	+		Psyr_1531	0.83	+0.2
1,721,494	+		Psyr_1531	0.83	-0.2
1,721,494	+		Psyr_1531	0.83	+2.8
1,721,494	+		Psyr_1531	0.83	+0.2
1,721,494	+		Psyr_1531	0.83	+2.5
1,721,494	+		Psyr_1531	0.83	-2.1
1,721,494	+		Psyr_1531	0.83	-2.0
1,721,494	+		Psyr_1531	0.83	+3.9
1,721,494	+		Psyr_1531	0.83	+0.3
1,721,494	+		Psyr_1531	0.83	-1.5
1,721,494	+		Psyr_1531	0.83	-1.4
1,721,494	+		Psyr_1531	0.83	-0.6
1,721,494	+		Psyr_1531	0.83	-1.9
1,721,494	+		Psyr_1531	0.83	-3.1
1,721,494	+		Psyr_1531	0.83	+0.2
1,721,494	+		Psyr_1531	0.83	+3.3
1,721,495	-		Psyr_1531	0.83	+0.2
1,721,495	-		Psyr_1531	0.83	-1.3
1,721,495	-		Psyr_1531	0.83	-1.2
1,721,495	-		Psyr_1531	0.83	-3.8
1,721,495	-		Psyr_1531	0.83	-3.3
1,721,495	-		Psyr_1531	0.83	-0.8
1,721,495	-		Psyr_1531	0.83	-3.0
1,721,495	-		Psyr_1531	0.83	+1.6
1,721,495	-		Psyr_1531	0.83	-2.3
1,721,495	-		Psyr_1531	0.83	+0.2
1,721,495	-		Psyr_1531	0.83	+2.2
1,721,495	-		Psyr_1531	0.83	+1.2
1,721,495	-		Psyr_1531	0.83	-1.5
1,721,495	-		Psyr_1531	0.83	+4.3
1,721,495	-		Psyr_1531	0.83	-4.7
1,721,495	-		Psyr_1531	0.83	-3.5
1,721,502	+		Psyr_1531	0.84	+0.2
1,721,503	-		Psyr_1531	0.84	-0.1
1,721,503	-		Psyr_1531	0.84	-1.8
1,721,572	+		Psyr_1531	0.89	-1.8
1,721,572	+		Psyr_1531	0.89	-3.1
1,721,610	+				+0.0
1,721,611	-				+2.8
1,721,611	-				+1.8
1,721,613	+				-3.5
1,721,613	+				+0.7
1,721,703	+				-1.4
1,721,703	+				-0.0
1,721,703	+				-1.2
1,721,703	+				-1.2
1,721,703	+				+3.6
1,721,704	-				+0.6
1,721,704	-				-2.8
1,721,704	-				+0.2
1,721,784	-				-0.6
1,721,784	-				+1.2
1,721,784	-				-0.6
1,721,887	+		Psyr_1532	0.24	-0.6
1,721,887	+		Psyr_1532	0.24	-0.0
1,721,888	-		Psyr_1532	0.24	+1.2
1,721,938	+		Psyr_1532	0.31	+3.5
1,721,938	+		Psyr_1532	0.31	-3.0
1,722,082	+		Psyr_1532	0.52	-1.4
1,722,082	+		Psyr_1532	0.52	-1.2
1,722,082	+		Psyr_1532	0.52	+2.8
1,722,082	+		Psyr_1532	0.52	+2.5
1,722,083	-		Psyr_1532	0.52	-3.9
1,722,083	-		Psyr_1532	0.52	+2.8
1,722,083	-		Psyr_1532	0.52	-3.3
1,722,240	+		Psyr_1532	0.74	-1.8
1,722,241	-		Psyr_1532	0.75	+1.8
1,722,302	+		Psyr_1532	0.83	+1.8
1,722,341	+		Psyr_1532	0.89	+0.2
1,722,505	+		Psyr_1533	0.12	-2.9
1,722,505	+		Psyr_1533	0.12	+0.2
1,722,574	-		Psyr_1533	0.21	+2.4
1,722,574	-		Psyr_1533	0.21	+0.2
1,722,662	+		Psyr_1533	0.33	+2.2
1,722,662	+		Psyr_1533	0.33	-2.1
1,722,662	+		Psyr_1533	0.33	+0.2
1,722,662	+		Psyr_1533	0.33	+2.0
1,722,663	-		Psyr_1533	0.33	+1.2
1,722,663	-		Psyr_1533	0.33	-1.1
1,722,663	-		Psyr_1533	0.33	+1.8
1,722,663	-		Psyr_1533	0.33	-2.1
1,722,663	-		Psyr_1533	0.33	+1.2
1,722,663	-		Psyr_1533	0.33	+0.2
1,722,709	+		Psyr_1533	0.39	-1.1
1,722,709	+		Psyr_1533	0.39	-0.6