Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1489

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
1,676,287	+				-2.3
1,676,287	+				+0.7
1,676,287	+				-2.0
1,676,287	+				+3.2
1,676,287	+				+2.5
1,676,288	-				+2.2
1,676,288	-				-3.2
1,676,288	-				-0.6
1,676,311	-				-0.7
1,676,311	-				+2.8
1,676,371	+				+3.2
1,676,374	+				-1.4
1,676,374	+				-2.0
1,676,374	+				-1.6
1,676,375	-				+0.7
1,676,380	+				+0.2
1,676,381	-				-2.3
1,676,387	+				+0.2
1,676,476	+				-0.6
1,676,480	-				+2.8
1,676,489	+				+0.2
1,676,490	-				+2.2
1,676,498	+				-1.1
1,676,498	+				-2.0
1,676,499	-				-4.3
1,676,536	+				-1.3
1,676,536	+				-1.4
1,676,536	+				-1.4
1,676,536	+				+2.5
1,676,536	+				-2.3
1,676,536	+				-0.3
1,676,536	+				+3.2
1,676,536	+				-4.1
1,676,537	-				+0.2
1,676,537	-				+1.2
1,676,537	-				-4.1
1,676,537	-				+0.2
1,676,538	+				-0.2
1,676,684	+				+2.5
1,676,693	+				-1.4
1,676,693	+				-1.8
1,676,694	-				+0.2
1,676,694	-				+0.2
1,676,694	-				-2.5
1,676,705	+				-0.4
1,676,751	+				+0.1
1,676,751	+				-3.5
1,676,751	+				+3.9
1,676,751	+				+2.2
1,676,751	+				+0.2
1,676,751	+				-0.7
1,676,751	+				+3.9
1,676,751	+				-0.6
1,676,752	-				+0.2
1,676,752	-				+0.2
1,676,752	-				+0.2
1,676,752	-				-3.1
1,676,752	-				+0.2
1,676,752	-				-2.4
1,676,752	-				-4.6
1,676,752	-				-1.1
1,676,752	-				+0.2
1,676,752	-				-0.8
1,676,752	-				-3.7
1,676,752	-				+3.2
1,676,752	-				-2.7
1,676,771	+				-1.5
1,676,771	+				-2.6
1,676,771	+				-1.7
1,676,771	+				-3.8
1,676,771	+				-0.7
1,676,771	+				+2.2
1,676,771	+				-3.0
1,676,771	+				+0.1
1,676,771	+				+3.6
1,676,771	+				-3.9
1,676,771	+				+1.2
1,676,771	+				+2.5
1,676,772	-				-0.7
1,676,772	-				-2.9
1,676,772	-				-4.0
1,676,772	-				-0.7
1,676,851	+				+0.2
1,676,851	+				+3.2
1,676,869	-				-1.7
1,676,937	+				-2.9
1,676,937	+				+0.8
1,676,938	-				-0.2
1,676,954	+				-1.9
1,676,954	+				+1.8
1,676,955	-				-2.0
1,676,979	-				-0.9
1,676,979	-				-0.4
1,677,042	+				+2.2
1,677,135	-				+0.2
1,677,135	-				-0.4
1,677,135	-				-1.3
1,677,154	+				+0.2
1,677,247	+				-1.0
1,677,247	+				-3.4
1,677,247	+				-2.6
1,677,248	-				-2.5
1,677,261	+				+2.2
1,677,262	-				+1.2
1,677,286	-				-0.3
1,677,286	-				-3.7
1,677,288	+				-2.6
1,677,288	+				+1.2
1,677,289	-				-2.8
1,677,289	-				+0.2
1,677,289	-				-2.0
1,677,289	-				-2.1
1,677,317	-		Psyr_1489	0.11	-1.6
1,677,317	-		Psyr_1489	0.11	+0.2
1,677,317	-		Psyr_1489	0.11	-1.1
1,677,344	-		Psyr_1489	0.20	+2.2
1,677,369	+		Psyr_1489	0.29	+1.8
1,677,450	+		Psyr_1489	0.58	+0.2
1,677,450	+		Psyr_1489	0.58	-1.2
1,677,451	-		Psyr_1489	0.59	-1.3
1,677,480	+		Psyr_1489	0.69	-4.3
1,677,481	-		Psyr_1489	0.70	+0.2
1,677,481	-		Psyr_1489	0.70	-0.8
1,677,481	-		Psyr_1489	0.70	+1.2
1,677,481	-		Psyr_1489	0.70	-2.0
1,677,571	+				+2.2
1,677,571	+				-2.8
1,677,572	-				-2.1
1,677,572	-				+0.2
1,677,572	-				+2.2
1,677,619	+				-2.2
1,677,619	+				+2.5
1,677,619	+				-0.1
1,677,620	-				-3.7
1,677,620	-				-1.1
1,677,620	-				+0.2
1,677,620	-				+3.2
1,677,620	-				-3.1
1,677,644	-				+3.6
1,677,672	+				-0.8
1,678,074	+				-1.1
1,678,075	-				+0.8
1,678,075	-				-2.7
1,678,075	-				-2.6
1,678,075	-				+0.2
1,678,116	+				-3.3
1,678,116	+				+3.0
1,678,116	+				-2.8
1,678,116	+				-4.7
1,678,116	+				+3.4
1,678,116	+				-1.5
1,678,116	+				+0.5
1,678,117	-				+3.5
1,678,117	-				+1.2
1,678,117	-				+2.2
1,678,117	-				+4.1
1,678,117	-				-4.8
1,678,117	-				-0.6
1,678,119	-				+0.9
1,678,119	-				+3.2
1,678,143	+				+1.6
1,678,143	+				-1.7
1,678,143	+				-0.1
1,678,143	+				-1.1
1,678,183	+				-1.2
1,678,183	+				-2.2
1,678,183	+				-1.9
1,678,183	+				+2.2
1,678,183	+				+0.2
1,678,184	-				+4.4
1,678,184	-				-1.4
1,678,184	-				+3.8
1,678,184	-				+0.2
1,678,184	-				+1.0
1,678,184	-				-2.7
1,678,191	+				-2.1
1,678,192	-				-2.1
1,678,192	-				+0.7
1,678,196	+				+4.0
1,678,196	+				+0.2
1,678,197	-				+1.8
1,678,197	-				-0.6
1,678,231	-				+1.8
1,678,404	+		Psyr_1491	0.13	-1.9
1,678,404	+		Psyr_1491	0.13	-0.1
1,678,404	+		Psyr_1491	0.13	-1.4
1,678,404	+		Psyr_1491	0.13	-1.3
1,678,404	+		Psyr_1491	0.13	+4.3
1,678,404	+		Psyr_1491	0.13	-0.1
1,678,405	-		Psyr_1491	0.13	-2.6
1,678,405	-		Psyr_1491	0.13	-2.6
1,678,405	-		Psyr_1491	0.13	-1.4
1,678,405	-		Psyr_1491	0.13	-0.6
1,678,405	-		Psyr_1491	0.13	+1.8
1,678,405	-		Psyr_1491	0.13	+2.2
1,678,405	-		Psyr_1491	0.13	-1.4
1,678,405	-		Psyr_1491	0.13	+3.6
1,678,405	-		Psyr_1491	0.13	+1.8
1,678,405	-		Psyr_1491	0.13	+3.0
1,678,405	-		Psyr_1491	0.13	+0.2
1,678,405	-		Psyr_1491	0.13	-1.9
1,678,405	-		Psyr_1491	0.13	-2.0