Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1022 and Psyr_1023 are separated by 151 nucleotides Psyr_1023 and Psyr_1024 are separated by 206 nucleotides Psyr_1024 and Psyr_1025 are separated by 111 nucleotides
Psyr_1022: Psyr_1022 - conserved hypothetical protein, at 1,153,512 to 1,154,078
_1022
Psyr_1023: Psyr_1023 - conserved hypothetical protein, at 1,154,230 to 1,154,835
_1023
Psyr_1024: Psyr_1024 - Flavodoxin/nitric oxide synthase, at 1,155,042 to 1,155,494
_1024
Psyr_1025: Psyr_1025 - Short-chain dehydrogenase/reductase SDR, at 1,155,606 to 1,156,517
_1025
Position (kb) 1155
1156 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 1154.072 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.081 kb on + strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.082 kb on - strand at 1154.083 kb on + strand at 1154.083 kb on + strand at 1154.083 kb on + strand at 1154.084 kb on - strand at 1154.084 kb on - strand at 1154.084 kb on - strand at 1154.183 kb on - strand at 1154.231 kb on + strand at 1154.232 kb on - strand at 1154.276 kb on + strand at 1154.276 kb on + strand at 1154.276 kb on + strand at 1154.276 kb on + strand at 1154.276 kb on + strand at 1154.276 kb on + strand at 1154.276 kb on + strand at 1154.277 kb on - strand at 1154.277 kb on - strand at 1154.277 kb on - strand at 1154.277 kb on - strand at 1154.325 kb on - strand, within Psyr_1023 at 1154.325 kb on - strand, within Psyr_1023 at 1154.376 kb on + strand, within Psyr_1023 at 1154.574 kb on + strand, within Psyr_1023 at 1154.574 kb on + strand, within Psyr_1023 at 1154.749 kb on - strand, within Psyr_1023 at 1154.749 kb on - strand, within Psyr_1023 at 1154.758 kb on + strand, within Psyr_1023 at 1154.758 kb on + strand, within Psyr_1023 at 1154.758 kb on + strand, within Psyr_1023 at 1154.758 kb on + strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.759 kb on - strand, within Psyr_1023 at 1154.998 kb on + strand at 1154.998 kb on + strand at 1154.998 kb on + strand at 1155.005 kb on + strand at 1155.005 kb on + strand at 1155.006 kb on - strand at 1155.156 kb on - strand, within Psyr_1024 at 1155.156 kb on - strand, within Psyr_1024 at 1155.252 kb on + strand, within Psyr_1024 at 1155.483 kb on + strand at 1155.484 kb on - strand at 1155.484 kb on - strand at 1155.511 kb on + strand at 1155.511 kb on + strand at 1155.619 kb on + strand at 1155.619 kb on + strand at 1155.619 kb on + strand at 1155.814 kb on + strand, within Psyr_1025 at 1155.987 kb on + strand, within Psyr_1025 at 1155.987 kb on + strand, within Psyr_1025 at 1155.987 kb on + strand, within Psyr_1025 at 1155.987 kb on + strand, within Psyr_1025 at 1155.988 kb on - strand, within Psyr_1025 at 1155.988 kb on - strand, within Psyr_1025 at 1155.988 kb on - strand, within Psyr_1025 at 1155.988 kb on - strand, within Psyr_1025 at 1155.988 kb on - strand, within Psyr_1025 at 1155.988 kb on - strand, within Psyr_1025 at 1155.989 kb on + strand, within Psyr_1025 at 1155.989 kb on + strand, within Psyr_1025 at 1156.015 kb on - strand, within Psyr_1025 at 1156.071 kb on + strand, within Psyr_1025 at 1156.072 kb on - strand, within Psyr_1025 at 1156.072 kb on - strand, within Psyr_1025 at 1156.072 kb on - strand, within Psyr_1025 at 1156.095 kb on + strand, within Psyr_1025 at 1156.095 kb on + strand, within Psyr_1025 at 1156.095 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.275 kb on + strand, within Psyr_1025 at 1156.276 kb on - strand, within Psyr_1025 at 1156.276 kb on - strand, within Psyr_1025 at 1156.276 kb on - strand, within Psyr_1025 at 1156.276 kb on - strand, within Psyr_1025 at 1156.276 kb on - strand, within Psyr_1025
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 1,154,072 + -0.9 1,154,081 + +2.0 1,154,081 + -2.0 1,154,081 + -3.1 1,154,081 + +1.4 1,154,081 + +3.1 1,154,081 + -0.9 1,154,081 + -0.3 1,154,081 + +0.4 1,154,081 + +4.4 1,154,081 + -0.6 1,154,081 + -1.9 1,154,081 + +3.0 1,154,081 + +3.1 1,154,081 + -0.0 1,154,081 + -0.0 1,154,081 + -2.0 1,154,081 + -0.4 1,154,081 + -1.7 1,154,081 + +0.4 1,154,081 + +3.7 1,154,081 + -0.6 1,154,081 + -4.4 1,154,081 + -0.0 1,154,081 + -1.8 1,154,081 + +4.2 1,154,081 + +2.0 1,154,081 + -1.9 1,154,081 + -0.2 1,154,081 + -0.4 1,154,081 + -0.6 1,154,081 + -1.2 1,154,081 + +0.5 1,154,081 + -0.9 1,154,081 + -0.0 1,154,081 + -0.8 1,154,081 + -4.0 1,154,081 + +0.0 1,154,081 + +2.5 1,154,081 + -4.6 1,154,081 + -1.9 1,154,081 + -0.3 1,154,081 + +2.5 1,154,081 + -0.0 1,154,081 + -4.5 1,154,081 + -0.9 1,154,081 + +3.1 1,154,082 - +1.1 1,154,082 - -0.0 1,154,082 - -5.0 1,154,082 - -2.7 1,154,082 - -0.0 1,154,082 - +1.5 1,154,082 - +2.8 1,154,082 - -1.0 1,154,082 - +2.3 1,154,082 - -2.7 1,154,082 - +2.0 1,154,082 - +4.2 1,154,082 - +2.3 1,154,082 - +0.5 1,154,082 - -4.2 1,154,082 - -0.0 1,154,082 - +1.5 1,154,082 - -2.5 1,154,082 - +3.3 1,154,082 - -3.5 1,154,082 - -2.4 1,154,082 - -4.8 1,154,082 - -0.0 1,154,082 - +3.5 1,154,082 - +4.1 1,154,082 - -2.9 1,154,082 - +3.1 1,154,082 - -2.9 1,154,082 - +1.5 1,154,082 - -0.0 1,154,082 - +1.0 1,154,082 - +1.1 1,154,082 - -1.8 1,154,082 - -1.0 1,154,082 - +0.1 1,154,082 - +1.0 1,154,082 - +1.5 1,154,082 - -0.6 1,154,082 - -3.1 1,154,082 - +2.3 1,154,083 + +3.7 1,154,083 + -2.0 1,154,083 + -0.0 1,154,084 - -2.9 1,154,084 - -0.4 1,154,084 - -0.0 1,154,183 - -1.3 1,154,231 + +2.8 1,154,232 - -1.4 1,154,276 + -3.7 1,154,276 + -1.9 1,154,276 + -2.5 1,154,276 + -1.6 1,154,276 + -0.6 1,154,276 + -0.0 1,154,276 + -0.8 1,154,277 - +3.0 1,154,277 - -4.0 1,154,277 - -0.3 1,154,277 - +1.5 1,154,325 - Psyr_1023 0.16 -0.8 1,154,325 - Psyr_1023 0.16 -2.8 1,154,376 + Psyr_1023 0.24 -4.4 1,154,574 + Psyr_1023 0.57 -1.0 1,154,574 + Psyr_1023 0.57 +2.0 1,154,749 - Psyr_1023 0.86 -3.0 1,154,749 - Psyr_1023 0.86 -2.2 1,154,758 + Psyr_1023 0.87 +1.5 1,154,758 + Psyr_1023 0.87 -0.0 1,154,758 + Psyr_1023 0.87 +3.1 1,154,758 + Psyr_1023 0.87 -0.4 1,154,759 - Psyr_1023 0.87 -1.1 1,154,759 - Psyr_1023 0.87 -2.6 1,154,759 - Psyr_1023 0.87 +0.5 1,154,759 - Psyr_1023 0.87 -2.5 1,154,759 - Psyr_1023 0.87 -2.0 1,154,759 - Psyr_1023 0.87 -0.0 1,154,759 - Psyr_1023 0.87 -3.6 1,154,759 - Psyr_1023 0.87 +2.8 1,154,759 - Psyr_1023 0.87 -0.0 1,154,998 + +0.3 1,154,998 + +1.5 1,154,998 + +0.2 1,155,005 + +0.4 1,155,005 + -3.3 1,155,006 - -1.9 1,155,156 - Psyr_1024 0.25 -2.4 1,155,156 - Psyr_1024 0.25 -2.1 1,155,252 + Psyr_1024 0.46 -0.8 1,155,483 + -1.7 1,155,484 - -0.0 1,155,484 - +3.4 1,155,511 + -2.2 1,155,511 + +4.0 1,155,619 + -0.3 1,155,619 + -0.0 1,155,619 + -0.2 1,155,814 + Psyr_1025 0.23 -3.0 1,155,987 + Psyr_1025 0.42 -3.7 1,155,987 + Psyr_1025 0.42 -0.0 1,155,987 + Psyr_1025 0.42 +3.1 1,155,987 + Psyr_1025 0.42 +3.7 1,155,988 - Psyr_1025 0.42 -2.9 1,155,988 - Psyr_1025 0.42 -0.4 1,155,988 - Psyr_1025 0.42 -0.9 1,155,988 - Psyr_1025 0.42 -0.0 1,155,988 - Psyr_1025 0.42 +1.5 1,155,988 - Psyr_1025 0.42 +1.5 1,155,989 + Psyr_1025 0.42 -0.0 1,155,989 + Psyr_1025 0.42 -0.0 1,156,015 - Psyr_1025 0.45 -0.9 1,156,071 + Psyr_1025 0.51 -0.4 1,156,072 - Psyr_1025 0.51 -2.3 1,156,072 - Psyr_1025 0.51 -0.7 1,156,072 - Psyr_1025 0.51 +4.2 1,156,095 + Psyr_1025 0.54 -3.0 1,156,095 + Psyr_1025 0.54 +2.0 1,156,095 + Psyr_1025 0.54 +2.8 1,156,275 + Psyr_1025 0.73 +1.0 1,156,275 + Psyr_1025 0.73 -3.0 1,156,275 + Psyr_1025 0.73 -3.5 1,156,275 + Psyr_1025 0.73 -0.0 1,156,275 + Psyr_1025 0.73 -2.0 1,156,275 + Psyr_1025 0.73 +2.0 1,156,275 + Psyr_1025 0.73 +0.6 1,156,275 + Psyr_1025 0.73 +2.0 1,156,275 + Psyr_1025 0.73 +2.0 1,156,276 - Psyr_1025 0.73 +3.3 1,156,276 - Psyr_1025 0.73 -1.0 1,156,276 - Psyr_1025 0.73 -0.0 1,156,276 - Psyr_1025 0.73 +2.8 1,156,276 - Psyr_1025 0.73 +0.9
Or see this region's nucleotide sequence