Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1012 and Psyr_1013 are separated by 180 nucleotides Psyr_1013 and Psyr_1014 are separated by 316 nucleotides Psyr_1014 and Psyr_1015 are separated by 184 nucleotides
Psyr_1012: Psyr_1012 - Glycosyl transferase, group 1, at 1,146,154 to 1,147,374
_1012
Psyr_1013: Psyr_1013 - hypothetical protein, at 1,147,555 to 1,147,875
_1013
Psyr_1014: Psyr_1014 - conserved domain protein, at 1,148,192 to 1,148,536
_1014
Psyr_1015: Psyr_1015 - Protein of unknown function DUF540, at 1,148,721 to 1,149,482
_1015
Position (kb) 1147
1148 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 1146.663 kb on + strand, within Psyr_1012 at 1146.664 kb on - strand, within Psyr_1012 at 1146.944 kb on + strand, within Psyr_1012 at 1146.945 kb on - strand, within Psyr_1012 at 1146.945 kb on - strand, within Psyr_1012 at 1146.980 kb on + strand, within Psyr_1012 at 1146.980 kb on + strand, within Psyr_1012 at 1146.990 kb on + strand, within Psyr_1012 at 1146.990 kb on + strand, within Psyr_1012 at 1146.990 kb on + strand, within Psyr_1012 at 1146.990 kb on + strand, within Psyr_1012 at 1146.991 kb on - strand, within Psyr_1012 at 1146.991 kb on - strand, within Psyr_1012 at 1146.991 kb on - strand, within Psyr_1012 at 1146.991 kb on - strand, within Psyr_1012 at 1146.991 kb on - strand, within Psyr_1012 at 1146.993 kb on - strand, within Psyr_1012 at 1146.993 kb on - strand, within Psyr_1012 at 1146.993 kb on - strand, within Psyr_1012 at 1147.091 kb on + strand, within Psyr_1012 at 1147.091 kb on + strand, within Psyr_1012 at 1147.091 kb on + strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.092 kb on - strand, within Psyr_1012 at 1147.333 kb on - strand at 1147.359 kb on + strand at 1147.394 kb on + strand at 1147.394 kb on + strand at 1147.395 kb on - strand at 1147.405 kb on + strand at 1147.416 kb on + strand at 1147.416 kb on + strand at 1147.435 kb on - strand at 1147.479 kb on + strand at 1147.483 kb on + strand at 1147.483 kb on + strand at 1147.484 kb on - strand at 1147.484 kb on - strand at 1147.484 kb on - strand at 1147.484 kb on - strand at 1147.484 kb on - strand at 1147.484 kb on - strand at 1147.486 kb on + strand at 1147.486 kb on + strand at 1147.486 kb on + strand at 1147.486 kb on + strand at 1147.487 kb on - strand at 1147.498 kb on + strand at 1147.498 kb on + strand at 1147.498 kb on + strand at 1147.498 kb on + strand at 1147.498 kb on + strand at 1147.499 kb on - strand at 1147.499 kb on - strand at 1147.540 kb on + strand at 1147.540 kb on + strand at 1147.541 kb on - strand at 1147.541 kb on - strand at 1147.541 kb on - strand at 1147.596 kb on + strand, within Psyr_1013 at 1147.597 kb on - strand, within Psyr_1013 at 1147.597 kb on - strand, within Psyr_1013 at 1147.651 kb on - strand, within Psyr_1013 at 1147.808 kb on + strand, within Psyr_1013 at 1147.858 kb on + strand at 1147.858 kb on + strand at 1147.859 kb on - strand at 1147.900 kb on - strand at 1147.900 kb on - strand at 1147.903 kb on + strand at 1147.903 kb on + strand at 1147.904 kb on - strand at 1147.907 kb on - strand at 1147.921 kb on + strand at 1147.940 kb on - strand at 1147.957 kb on + strand at 1147.957 kb on + strand at 1147.957 kb on + strand at 1147.957 kb on + strand at 1147.957 kb on + strand at 1147.958 kb on - strand at 1147.984 kb on - strand at 1148.054 kb on - strand at 1148.055 kb on + strand at 1148.055 kb on + strand at 1148.055 kb on + strand at 1148.055 kb on + strand at 1148.056 kb on - strand at 1148.056 kb on - strand at 1148.056 kb on - strand at 1148.057 kb on + strand at 1148.057 kb on + strand at 1148.057 kb on + strand at 1148.057 kb on + strand at 1148.058 kb on - strand at 1148.058 kb on - strand at 1148.058 kb on - strand at 1148.080 kb on + strand at 1148.080 kb on + strand at 1148.081 kb on - strand at 1148.081 kb on - strand at 1148.081 kb on - strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.082 kb on + strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.083 kb on - strand at 1148.084 kb on + strand at 1148.084 kb on + strand at 1148.084 kb on + strand at 1148.084 kb on + strand at 1148.084 kb on + strand at 1148.085 kb on - strand at 1148.091 kb on - strand at 1148.128 kb on + strand at 1148.129 kb on - strand at 1148.161 kb on + strand at 1148.274 kb on + strand, within Psyr_1014 at 1148.275 kb on - strand, within Psyr_1014 at 1148.280 kb on + strand, within Psyr_1014 at 1148.281 kb on - strand, within Psyr_1014 at 1148.316 kb on + strand, within Psyr_1014 at 1148.316 kb on + strand, within Psyr_1014 at 1148.418 kb on + strand, within Psyr_1014 at 1148.418 kb on + strand, within Psyr_1014 at 1148.418 kb on + strand, within Psyr_1014 at 1148.418 kb on + strand, within Psyr_1014 at 1148.418 kb on + strand, within Psyr_1014 at 1148.419 kb on - strand, within Psyr_1014 at 1148.419 kb on - strand, within Psyr_1014 at 1148.419 kb on - strand, within Psyr_1014 at 1148.419 kb on - strand, within Psyr_1014 at 1148.419 kb on - strand, within Psyr_1014 at 1148.419 kb on - strand, within Psyr_1014 at 1148.522 kb on + strand at 1148.523 kb on - strand at 1148.523 kb on - strand at 1148.541 kb on + strand at 1148.553 kb on + strand at 1148.553 kb on + strand at 1148.554 kb on - strand at 1148.621 kb on - strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.652 kb on + strand at 1148.653 kb on - strand at 1148.653 kb on - strand at 1148.653 kb on - strand at 1148.653 kb on - strand at 1148.653 kb on - strand at 1148.653 kb on - strand at 1148.653 kb on - strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.656 kb on + strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.657 kb on - strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.658 kb on + strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.659 kb on - strand at 1148.845 kb on + strand, within Psyr_1015 at 1148.845 kb on + strand, within Psyr_1015 at 1148.845 kb on + strand, within Psyr_1015 at 1148.846 kb on - strand, within Psyr_1015
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 1,146,663 + Psyr_1012 0.42 -0.3 1,146,664 - Psyr_1012 0.42 +1.5 1,146,944 + Psyr_1012 0.65 +2.0 1,146,945 - Psyr_1012 0.65 -0.8 1,146,945 - Psyr_1012 0.65 -1.9 1,146,980 + Psyr_1012 0.68 -0.6 1,146,980 + Psyr_1012 0.68 -5.0 1,146,990 + Psyr_1012 0.68 -0.0 1,146,990 + Psyr_1012 0.68 +3.1 1,146,990 + Psyr_1012 0.68 -2.7 1,146,990 + Psyr_1012 0.68 -3.4 1,146,991 - Psyr_1012 0.69 -2.4 1,146,991 - Psyr_1012 0.69 -0.6 1,146,991 - Psyr_1012 0.69 -1.2 1,146,991 - Psyr_1012 0.69 -1.5 1,146,991 - Psyr_1012 0.69 +1.0 1,146,993 - Psyr_1012 0.69 +4.5 1,146,993 - Psyr_1012 0.69 -0.4 1,146,993 - Psyr_1012 0.69 +2.0 1,147,091 + Psyr_1012 0.77 +2.5 1,147,091 + Psyr_1012 0.77 -0.2 1,147,091 + Psyr_1012 0.77 -0.2 1,147,092 - Psyr_1012 0.77 +3.8 1,147,092 - Psyr_1012 0.77 -2.3 1,147,092 - Psyr_1012 0.77 -4.4 1,147,092 - Psyr_1012 0.77 +0.5 1,147,092 - Psyr_1012 0.77 -0.9 1,147,092 - Psyr_1012 0.77 -0.0 1,147,092 - Psyr_1012 0.77 -1.2 1,147,092 - Psyr_1012 0.77 -2.4 1,147,333 - -0.0 1,147,359 + -2.6 1,147,394 + -0.8 1,147,394 + -4.1 1,147,395 - -3.3 1,147,405 + -0.5 1,147,416 + -3.4 1,147,416 + -2.4 1,147,435 - +0.7 1,147,479 + -4.0 1,147,483 + -0.0 1,147,483 + -3.9 1,147,484 - +0.5 1,147,484 - -1.0 1,147,484 - -0.4 1,147,484 - -2.4 1,147,484 - +3.3 1,147,484 - -0.0 1,147,486 + -0.2 1,147,486 + -1.6 1,147,486 + -2.2 1,147,486 + -5.5 1,147,487 - +4.0 1,147,498 + +1.5 1,147,498 + -1.3 1,147,498 + -0.0 1,147,498 + +3.0 1,147,498 + -3.4 1,147,499 - +2.5 1,147,499 - +3.0 1,147,540 + -3.2 1,147,540 + -1.8 1,147,541 - -2.7 1,147,541 - -1.4 1,147,541 - -1.7 1,147,596 + Psyr_1013 0.13 -3.3 1,147,597 - Psyr_1013 0.13 +2.8 1,147,597 - Psyr_1013 0.13 -3.7 1,147,651 - Psyr_1013 0.30 -2.3 1,147,808 + Psyr_1013 0.79 -3.5 1,147,858 + +3.8 1,147,858 + -0.0 1,147,859 - +2.5 1,147,900 - +0.5 1,147,900 - -4.7 1,147,903 + -0.6 1,147,903 + -1.4 1,147,904 - -0.0 1,147,907 - -1.1 1,147,921 + +3.8 1,147,940 - +1.0 1,147,957 + -0.3 1,147,957 + -0.0 1,147,957 + +3.5 1,147,957 + +1.0 1,147,957 + -0.5 1,147,958 - +3.1 1,147,984 - -2.4 1,148,054 - +3.0 1,148,055 + +2.8 1,148,055 + -1.9 1,148,055 + +4.9 1,148,055 + +1.6 1,148,056 - -2.9 1,148,056 - -2.6 1,148,056 - +2.0 1,148,057 + -1.3 1,148,057 + +2.3 1,148,057 + +0.3 1,148,057 + +2.5 1,148,058 - -4.1 1,148,058 - -2.7 1,148,058 - -5.2 1,148,080 + +1.5 1,148,080 + -2.6 1,148,081 - -0.0 1,148,081 - -2.9 1,148,081 - -0.0 1,148,082 + +0.1 1,148,082 + +4.4 1,148,082 + +1.6 1,148,082 + -1.6 1,148,082 + -0.0 1,148,082 + -1.2 1,148,082 + -2.2 1,148,082 + +2.4 1,148,083 - +1.5 1,148,083 - -3.0 1,148,083 - +0.5 1,148,083 - -3.2 1,148,083 - -0.0 1,148,083 - -4.0 1,148,083 - -0.0 1,148,083 - -1.2 1,148,084 + +2.5 1,148,084 + +3.7 1,148,084 + -0.3 1,148,084 + -3.7 1,148,084 + +4.5 1,148,085 - -0.0 1,148,091 - -3.0 1,148,128 + +3.5 1,148,129 - -4.0 1,148,161 + -0.9 1,148,274 + Psyr_1014 0.24 -1.1 1,148,275 - Psyr_1014 0.24 -1.1 1,148,280 + Psyr_1014 0.26 +0.8 1,148,281 - Psyr_1014 0.26 -0.4 1,148,316 + Psyr_1014 0.36 +3.3 1,148,316 + Psyr_1014 0.36 -0.9 1,148,418 + Psyr_1014 0.66 +3.1 1,148,418 + Psyr_1014 0.66 +1.5 1,148,418 + Psyr_1014 0.66 -2.2 1,148,418 + Psyr_1014 0.66 -0.0 1,148,418 + Psyr_1014 0.66 -2.7 1,148,419 - Psyr_1014 0.66 +0.0 1,148,419 - Psyr_1014 0.66 -2.3 1,148,419 - Psyr_1014 0.66 +1.7 1,148,419 - Psyr_1014 0.66 -1.7 1,148,419 - Psyr_1014 0.66 -0.0 1,148,419 - Psyr_1014 0.66 -2.6 1,148,522 + -1.3 1,148,523 - +3.9 1,148,523 - +4.0 1,148,541 + +1.0 1,148,553 + -0.5 1,148,553 + +4.2 1,148,554 - -1.6 1,148,621 - -0.0 1,148,652 + -1.5 1,148,652 + -2.0 1,148,652 + -2.7 1,148,652 + -1.3 1,148,652 + -0.6 1,148,652 + -2.8 1,148,652 + -1.2 1,148,652 + +3.1 1,148,652 + -0.0 1,148,653 - +3.1 1,148,653 - -0.7 1,148,653 - -1.6 1,148,653 - -0.5 1,148,653 - -0.0 1,148,653 - -1.9 1,148,653 - +0.3 1,148,656 + +0.1 1,148,656 + -0.2 1,148,656 + -0.0 1,148,656 + +0.2 1,148,656 + +1.1 1,148,656 + +2.1 1,148,656 + +0.4 1,148,656 + -2.6 1,148,656 + +0.3 1,148,656 + -0.4 1,148,656 + +3.0 1,148,656 + +1.5 1,148,656 + -3.7 1,148,656 + +0.7 1,148,656 + -0.3 1,148,656 + -2.4 1,148,656 + -1.6 1,148,656 + -2.3 1,148,657 - +0.7 1,148,657 - +0.4 1,148,657 - +1.0 1,148,657 - -0.5 1,148,657 - -1.7 1,148,657 - -2.5 1,148,657 - +2.3 1,148,657 - +3.9 1,148,657 - +2.5 1,148,657 - +2.5 1,148,657 - +0.6 1,148,657 - +0.3 1,148,657 - -0.5 1,148,657 - -0.8 1,148,657 - -2.6 1,148,657 - +1.0 1,148,657 - -1.3 1,148,657 - -2.3 1,148,657 - +4.0 1,148,658 + +1.3 1,148,658 + -0.0 1,148,658 + -2.3 1,148,658 + -1.9 1,148,658 + +3.4 1,148,658 + -1.6 1,148,658 + -0.0 1,148,658 + -1.0 1,148,658 + -0.8 1,148,658 + +2.0 1,148,658 + +1.9 1,148,659 - -1.4 1,148,659 - -1.5 1,148,659 - -2.9 1,148,659 - -3.0 1,148,659 - -0.9 1,148,659 - +2.3 1,148,659 - -1.3 1,148,659 - -1.7 1,148,845 + Psyr_1015 0.16 -0.0 1,148,845 + Psyr_1015 0.16 -3.3 1,148,845 + Psyr_1015 0.16 +0.5 1,148,846 - Psyr_1015 0.16 +1.0
Or see this region's nucleotide sequence