Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0994 and Psyr_0995 are separated by 256 nucleotides Psyr_0995 and Psyr_0996 are separated by 26 nucleotides Psyr_0996 and Psyr_0997 are separated by 41 nucleotides Psyr_0997 and Psyr_0998 are separated by 10 nucleotides
Psyr_0994: Psyr_0994 - Metal-dependent phosphohydrolase, HD subdomain protein, at 1,128,435 to 1,129,616
_0994
Psyr_0995: Psyr_0995 - Flavin reductase-like protein, at 1,129,873 to 1,130,409
_0995
Psyr_0996: Psyr_0996 - Alpha/beta hydrolase fold protein, at 1,130,436 to 1,131,215
_0996
Psyr_0997: Psyr_0997 - Endoribonuclease L-PSP, at 1,131,257 to 1,131,640
_0997
Psyr_0998: Psyr_0998 - Isochorismatase hydrolase, at 1,131,651 to 1,132,388
_0998
Position (kb) 1130
1131
1132 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 1129.466 kb on + strand, within Psyr_0994 at 1129.467 kb on - strand, within Psyr_0994 at 1129.527 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.573 kb on + strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.574 kb on - strand at 1129.671 kb on + strand at 1129.671 kb on + strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.672 kb on - strand at 1129.801 kb on + strand at 1129.802 kb on - strand at 1129.802 kb on - strand at 1129.802 kb on - strand at 1129.809 kb on - strand at 1129.922 kb on + strand at 1129.922 kb on + strand at 1129.923 kb on - strand at 1130.157 kb on + strand, within Psyr_0995 at 1130.158 kb on - strand, within Psyr_0995 at 1130.195 kb on + strand, within Psyr_0995 at 1130.195 kb on + strand, within Psyr_0995 at 1130.196 kb on - strand, within Psyr_0995 at 1130.196 kb on - strand, within Psyr_0995 at 1130.196 kb on - strand, within Psyr_0995 at 1130.217 kb on + strand, within Psyr_0995 at 1130.217 kb on + strand, within Psyr_0995 at 1130.217 kb on + strand, within Psyr_0995 at 1130.404 kb on - strand at 1130.515 kb on + strand, within Psyr_0996 at 1130.793 kb on + strand, within Psyr_0996 at 1130.793 kb on + strand, within Psyr_0996 at 1130.793 kb on + strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.794 kb on - strand, within Psyr_0996 at 1130.797 kb on + strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.798 kb on - strand, within Psyr_0996 at 1130.890 kb on - strand, within Psyr_0996 at 1131.082 kb on + strand, within Psyr_0996 at 1131.082 kb on + strand, within Psyr_0996 at 1131.082 kb on + strand, within Psyr_0996 at 1131.083 kb on - strand, within Psyr_0996 at 1131.083 kb on - strand, within Psyr_0996 at 1131.083 kb on - strand, within Psyr_0996 at 1131.355 kb on - strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.363 kb on + strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.364 kb on - strand, within Psyr_0997 at 1131.384 kb on + strand, within Psyr_0997 at 1131.512 kb on + strand, within Psyr_0997 at 1131.513 kb on - strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.555 kb on + strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.556 kb on - strand, within Psyr_0997 at 1131.991 kb on + strand, within Psyr_0998 at 1132.105 kb on + strand, within Psyr_0998 at 1132.105 kb on + strand, within Psyr_0998 at 1132.105 kb on + strand, within Psyr_0998 at 1132.105 kb on + strand, within Psyr_0998 at 1132.106 kb on - strand, within Psyr_0998 at 1132.106 kb on - strand, within Psyr_0998 at 1132.181 kb on + strand, within Psyr_0998
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 1,129,466 + Psyr_0994 0.87 -4.3 1,129,467 - Psyr_0994 0.87 -1.2 1,129,527 + +2.3 1,129,573 + -0.9 1,129,573 + +4.1 1,129,573 + -4.2 1,129,573 + -2.6 1,129,573 + +4.0 1,129,573 + -0.2 1,129,573 + +3.4 1,129,573 + +2.8 1,129,573 + -0.6 1,129,573 + +0.2 1,129,573 + -1.2 1,129,573 + +1.2 1,129,573 + -1.6 1,129,573 + -1.0 1,129,573 + +1.0 1,129,573 + -1.4 1,129,573 + +0.7 1,129,573 + -1.0 1,129,573 + -2.1 1,129,573 + +3.0 1,129,573 + -0.7 1,129,573 + -0.4 1,129,573 + -0.4 1,129,573 + +0.3 1,129,573 + -0.2 1,129,573 + -0.0 1,129,573 + -0.0 1,129,573 + -1.2 1,129,573 + -3.0 1,129,574 - -3.4 1,129,574 - -0.0 1,129,574 - -0.9 1,129,574 - -1.4 1,129,574 - -2.8 1,129,574 - -2.5 1,129,574 - -1.6 1,129,574 - +3.9 1,129,574 - -2.2 1,129,574 - -6.2 1,129,574 - -2.8 1,129,574 - -1.2 1,129,574 - +1.1 1,129,574 - -0.0 1,129,574 - +1.6 1,129,574 - +2.6 1,129,574 - -2.2 1,129,574 - +3.4 1,129,574 - +2.6 1,129,574 - -1.5 1,129,574 - -0.6 1,129,574 - +0.5 1,129,574 - +3.7 1,129,574 - -0.0 1,129,574 - +3.7 1,129,574 - +4.5 1,129,574 - -0.0 1,129,574 - +3.0 1,129,574 - +3.1 1,129,574 - +2.0 1,129,574 - -3.3 1,129,574 - +2.0 1,129,574 - -0.6 1,129,574 - +3.9 1,129,574 - -1.2 1,129,574 - -1.6 1,129,574 - +0.4 1,129,574 - -0.0 1,129,574 - +3.6 1,129,574 - +2.8 1,129,671 + -2.2 1,129,671 + -3.7 1,129,672 - -2.3 1,129,672 - +0.5 1,129,672 - -0.6 1,129,672 - -1.1 1,129,672 - -0.5 1,129,672 - -0.9 1,129,801 + +1.2 1,129,802 - +1.5 1,129,802 - +1.6 1,129,802 - -0.0 1,129,809 - +1.6 1,129,922 + -0.9 1,129,922 + +3.6 1,129,923 - -0.7 1,130,157 + Psyr_0995 0.53 +0.3 1,130,158 - Psyr_0995 0.53 +2.0 1,130,195 + Psyr_0995 0.60 -1.9 1,130,195 + Psyr_0995 0.60 +4.4 1,130,196 - Psyr_0995 0.60 +1.3 1,130,196 - Psyr_0995 0.60 -1.3 1,130,196 - Psyr_0995 0.60 +2.0 1,130,217 + Psyr_0995 0.64 -0.6 1,130,217 + Psyr_0995 0.64 -1.1 1,130,217 + Psyr_0995 0.64 -1.2 1,130,404 - -3.2 1,130,515 + Psyr_0996 0.10 -1.6 1,130,793 + Psyr_0996 0.46 +3.5 1,130,793 + Psyr_0996 0.46 -0.2 1,130,793 + Psyr_0996 0.46 -1.6 1,130,794 - Psyr_0996 0.46 -4.4 1,130,794 - Psyr_0996 0.46 +1.5 1,130,794 - Psyr_0996 0.46 -1.5 1,130,794 - Psyr_0996 0.46 -3.4 1,130,794 - Psyr_0996 0.46 -1.0 1,130,797 + Psyr_0996 0.46 -2.6 1,130,798 - Psyr_0996 0.46 +2.5 1,130,798 - Psyr_0996 0.46 +1.5 1,130,798 - Psyr_0996 0.46 +0.6 1,130,798 - Psyr_0996 0.46 +3.1 1,130,798 - Psyr_0996 0.46 -2.0 1,130,798 - Psyr_0996 0.46 -0.8 1,130,798 - Psyr_0996 0.46 +2.5 1,130,890 - Psyr_0996 0.58 +2.0 1,131,082 + Psyr_0996 0.83 +1.9 1,131,082 + Psyr_0996 0.83 -1.8 1,131,082 + Psyr_0996 0.83 -2.1 1,131,083 - Psyr_0996 0.83 -3.4 1,131,083 - Psyr_0996 0.83 -0.0 1,131,083 - Psyr_0996 0.83 -0.0 1,131,355 - Psyr_0997 0.26 +3.0 1,131,363 + Psyr_0997 0.28 +1.5 1,131,363 + Psyr_0997 0.28 -0.4 1,131,363 + Psyr_0997 0.28 -2.8 1,131,363 + Psyr_0997 0.28 +3.0 1,131,363 + Psyr_0997 0.28 -0.7 1,131,363 + Psyr_0997 0.28 -2.9 1,131,363 + Psyr_0997 0.28 -1.6 1,131,363 + Psyr_0997 0.28 +3.4 1,131,363 + Psyr_0997 0.28 -2.8 1,131,364 - Psyr_0997 0.28 +1.5 1,131,364 - Psyr_0997 0.28 -1.3 1,131,364 - Psyr_0997 0.28 +2.3 1,131,364 - Psyr_0997 0.28 +1.0 1,131,364 - Psyr_0997 0.28 +3.1 1,131,364 - Psyr_0997 0.28 +0.2 1,131,384 + Psyr_0997 0.33 +2.0 1,131,512 + Psyr_0997 0.66 -2.0 1,131,513 - Psyr_0997 0.67 -2.6 1,131,555 + Psyr_0997 0.78 -0.0 1,131,555 + Psyr_0997 0.78 -0.7 1,131,555 + Psyr_0997 0.78 -3.2 1,131,555 + Psyr_0997 0.78 -3.4 1,131,555 + Psyr_0997 0.78 -2.0 1,131,555 + Psyr_0997 0.78 -2.5 1,131,555 + Psyr_0997 0.78 +4.5 1,131,555 + Psyr_0997 0.78 -1.0 1,131,555 + Psyr_0997 0.78 -2.9 1,131,555 + Psyr_0997 0.78 +1.4 1,131,555 + Psyr_0997 0.78 +0.0 1,131,555 + Psyr_0997 0.78 -0.0 1,131,556 - Psyr_0997 0.78 +2.0 1,131,556 - Psyr_0997 0.78 -0.0 1,131,556 - Psyr_0997 0.78 -1.6 1,131,556 - Psyr_0997 0.78 +1.5 1,131,556 - Psyr_0997 0.78 -1.0 1,131,556 - Psyr_0997 0.78 -0.0 1,131,556 - Psyr_0997 0.78 -0.0 1,131,556 - Psyr_0997 0.78 +4.4 1,131,556 - Psyr_0997 0.78 +1.2 1,131,991 + Psyr_0998 0.46 +4.9 1,132,105 + Psyr_0998 0.62 +2.0 1,132,105 + Psyr_0998 0.62 +3.9 1,132,105 + Psyr_0998 0.62 -1.6 1,132,105 + Psyr_0998 0.62 +2.3 1,132,106 - Psyr_0998 0.62 +4.5 1,132,106 - Psyr_0998 0.62 -2.0 1,132,181 + Psyr_0998 0.72 -2.4
Or see this region's nucleotide sequence