Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0991 and Psyr_0992 are separated by 22 nucleotides Psyr_0992 and Psyr_0993 are separated by 176 nucleotides
Psyr_0991: Psyr_0991 - Protein of unknown function DUF1302, at 1,122,141 to 1,124,078
_0991
Psyr_0992: Psyr_0992 - Protein of unknown function DUF1329, at 1,124,101 to 1,125,471
_0992
Psyr_0993: Psyr_0993 - transcriptional regulator, LuxR family, at 1,125,648 to 1,128,410
_0993
Position (kb) 1124
1125
1126 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 1123.101 kb on + strand, within Psyr_0991 at 1123.137 kb on + strand, within Psyr_0991 at 1123.137 kb on + strand, within Psyr_0991 at 1123.137 kb on + strand, within Psyr_0991 at 1123.137 kb on + strand, within Psyr_0991 at 1123.137 kb on + strand, within Psyr_0991 at 1123.138 kb on - strand, within Psyr_0991 at 1123.138 kb on - strand, within Psyr_0991 at 1123.138 kb on - strand, within Psyr_0991 at 1123.138 kb on - strand, within Psyr_0991 at 1123.138 kb on - strand, within Psyr_0991 at 1123.150 kb on - strand, within Psyr_0991 at 1123.150 kb on - strand, within Psyr_0991 at 1123.311 kb on + strand, within Psyr_0991 at 1123.311 kb on + strand, within Psyr_0991 at 1123.311 kb on + strand, within Psyr_0991 at 1123.311 kb on + strand, within Psyr_0991 at 1123.312 kb on - strand, within Psyr_0991 at 1123.312 kb on - strand, within Psyr_0991 at 1123.312 kb on - strand, within Psyr_0991 at 1123.312 kb on - strand, within Psyr_0991 at 1123.312 kb on - strand, within Psyr_0991 at 1123.314 kb on + strand, within Psyr_0991 at 1123.314 kb on + strand, within Psyr_0991 at 1123.315 kb on - strand, within Psyr_0991 at 1123.315 kb on - strand, within Psyr_0991 at 1123.315 kb on - strand, within Psyr_0991 at 1123.315 kb on - strand, within Psyr_0991 at 1123.315 kb on - strand, within Psyr_0991 at 1123.450 kb on - strand, within Psyr_0991 at 1123.833 kb on + strand, within Psyr_0991 at 1123.833 kb on + strand, within Psyr_0991 at 1123.834 kb on - strand, within Psyr_0991 at 1123.834 kb on - strand, within Psyr_0991 at 1123.834 kb on - strand, within Psyr_0991 at 1123.900 kb on - strand at 1123.980 kb on + strand at 1123.980 kb on + strand at 1123.980 kb on + strand at 1123.981 kb on - strand at 1123.981 kb on - strand at 1123.981 kb on - strand at 1123.981 kb on - strand at 1123.981 kb on - strand at 1123.998 kb on + strand at 1124.022 kb on + strand at 1124.022 kb on + strand at 1124.022 kb on + strand at 1124.022 kb on + strand at 1124.022 kb on + strand at 1124.022 kb on + strand at 1124.023 kb on - strand at 1124.023 kb on - strand at 1124.023 kb on - strand at 1124.023 kb on - strand at 1124.023 kb on - strand at 1124.023 kb on - strand at 1124.076 kb on + strand at 1124.076 kb on + strand at 1124.076 kb on + strand at 1124.077 kb on - strand at 1124.077 kb on - strand at 1124.247 kb on + strand, within Psyr_0992 at 1124.383 kb on + strand, within Psyr_0992 at 1124.384 kb on - strand, within Psyr_0992 at 1124.384 kb on - strand, within Psyr_0992 at 1124.384 kb on - strand, within Psyr_0992 at 1124.384 kb on - strand, within Psyr_0992 at 1124.701 kb on + strand, within Psyr_0992 at 1124.701 kb on + strand, within Psyr_0992 at 1124.701 kb on + strand, within Psyr_0992 at 1124.701 kb on + strand, within Psyr_0992 at 1124.702 kb on - strand, within Psyr_0992 at 1124.702 kb on - strand, within Psyr_0992 at 1124.776 kb on + strand, within Psyr_0992 at 1124.776 kb on + strand, within Psyr_0992 at 1124.777 kb on - strand, within Psyr_0992 at 1124.777 kb on - strand, within Psyr_0992 at 1124.777 kb on - strand, within Psyr_0992 at 1124.831 kb on + strand, within Psyr_0992 at 1124.831 kb on + strand, within Psyr_0992 at 1124.832 kb on - strand, within Psyr_0992 at 1124.832 kb on - strand, within Psyr_0992 at 1124.878 kb on + strand, within Psyr_0992 at 1124.878 kb on + strand, within Psyr_0992 at 1124.878 kb on + strand, within Psyr_0992 at 1124.879 kb on - strand, within Psyr_0992 at 1124.924 kb on - strand, within Psyr_0992 at 1124.924 kb on - strand, within Psyr_0992 at 1124.980 kb on + strand, within Psyr_0992 at 1124.980 kb on + strand, within Psyr_0992 at 1124.980 kb on + strand, within Psyr_0992 at 1124.980 kb on + strand, within Psyr_0992 at 1124.980 kb on + strand, within Psyr_0992 at 1124.980 kb on + strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1124.981 kb on - strand, within Psyr_0992 at 1125.002 kb on - strand, within Psyr_0992 at 1125.034 kb on + strand, within Psyr_0992 at 1125.034 kb on + strand, within Psyr_0992 at 1125.035 kb on - strand, within Psyr_0992 at 1125.035 kb on - strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.183 kb on + strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.184 kb on - strand, within Psyr_0992 at 1125.187 kb on + strand, within Psyr_0992 at 1125.187 kb on + strand, within Psyr_0992 at 1125.187 kb on + strand, within Psyr_0992 at 1125.187 kb on + strand, within Psyr_0992 at 1125.187 kb on + strand, within Psyr_0992 at 1125.187 kb on + strand, within Psyr_0992 at 1125.188 kb on - strand, within Psyr_0992 at 1125.188 kb on - strand, within Psyr_0992 at 1125.188 kb on - strand, within Psyr_0992 at 1125.188 kb on - strand, within Psyr_0992 at 1125.247 kb on + strand, within Psyr_0992 at 1125.248 kb on - strand, within Psyr_0992 at 1125.298 kb on + strand, within Psyr_0992 at 1125.298 kb on + strand, within Psyr_0992 at 1125.302 kb on - strand, within Psyr_0992 at 1125.314 kb on + strand, within Psyr_0992 at 1125.315 kb on - strand, within Psyr_0992 at 1125.315 kb on - strand, within Psyr_0992 at 1125.315 kb on - strand, within Psyr_0992 at 1125.315 kb on - strand, within Psyr_0992 at 1125.341 kb on - strand at 1125.362 kb on - strand at 1125.362 kb on - strand at 1125.400 kb on + strand at 1125.473 kb on - strand at 1125.563 kb on + strand at 1125.563 kb on + strand at 1125.563 kb on + strand at 1125.563 kb on + strand at 1125.563 kb on + strand at 1125.563 kb on + strand at 1125.564 kb on - strand at 1125.564 kb on - strand at 1125.564 kb on - strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.565 kb on + strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.566 kb on - strand at 1125.668 kb on - strand at 1125.771 kb on + strand at 1125.913 kb on + strand at 1125.913 kb on + strand at 1125.914 kb on - strand at 1125.914 kb on - strand at 1126.127 kb on - strand, within Psyr_0993 at 1126.127 kb on - strand, within Psyr_0993 at 1126.127 kb on - strand, within Psyr_0993 at 1126.127 kb on - strand, within Psyr_0993 at 1126.198 kb on + strand, within Psyr_0993 at 1126.198 kb on + strand, within Psyr_0993 at 1126.198 kb on + strand, within Psyr_0993 at 1126.199 kb on - strand, within Psyr_0993
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 1,123,101 + Psyr_0991 0.50 -1.8 1,123,137 + Psyr_0991 0.51 -1.2 1,123,137 + Psyr_0991 0.51 +0.1 1,123,137 + Psyr_0991 0.51 +3.3 1,123,137 + Psyr_0991 0.51 +2.2 1,123,137 + Psyr_0991 0.51 -0.0 1,123,138 - Psyr_0991 0.51 +1.6 1,123,138 - Psyr_0991 0.51 -1.6 1,123,138 - Psyr_0991 0.51 +3.7 1,123,138 - Psyr_0991 0.51 -1.4 1,123,138 - Psyr_0991 0.51 +2.0 1,123,150 - Psyr_0991 0.52 -0.7 1,123,150 - Psyr_0991 0.52 +1.2 1,123,311 + Psyr_0991 0.60 -2.7 1,123,311 + Psyr_0991 0.60 -1.3 1,123,311 + Psyr_0991 0.60 -0.0 1,123,311 + Psyr_0991 0.60 -4.2 1,123,312 - Psyr_0991 0.60 +1.0 1,123,312 - Psyr_0991 0.60 -2.0 1,123,312 - Psyr_0991 0.60 -0.0 1,123,312 - Psyr_0991 0.60 +3.4 1,123,312 - Psyr_0991 0.60 -2.0 1,123,314 + Psyr_0991 0.61 -4.3 1,123,314 + Psyr_0991 0.61 -5.0 1,123,315 - Psyr_0991 0.61 -1.9 1,123,315 - Psyr_0991 0.61 -2.3 1,123,315 - Psyr_0991 0.61 -0.0 1,123,315 - Psyr_0991 0.61 -2.8 1,123,315 - Psyr_0991 0.61 +4.0 1,123,450 - Psyr_0991 0.68 -1.4 1,123,833 + Psyr_0991 0.87 +2.8 1,123,833 + Psyr_0991 0.87 +0.4 1,123,834 - Psyr_0991 0.87 -2.9 1,123,834 - Psyr_0991 0.87 +2.3 1,123,834 - Psyr_0991 0.87 -0.7 1,123,900 - +0.2 1,123,980 + +1.0 1,123,980 + -0.3 1,123,980 + -0.0 1,123,981 - -0.0 1,123,981 - +2.3 1,123,981 - +2.6 1,123,981 - +3.1 1,123,981 - +4.4 1,123,998 + +3.1 1,124,022 + -0.9 1,124,022 + +3.1 1,124,022 + +1.0 1,124,022 + -0.9 1,124,022 + +3.6 1,124,022 + +2.8 1,124,023 - -1.2 1,124,023 - -2.2 1,124,023 - -0.0 1,124,023 - +4.6 1,124,023 - -0.1 1,124,023 - -2.4 1,124,076 + -3.2 1,124,076 + +1.5 1,124,076 + +3.1 1,124,077 - +2.8 1,124,077 - +1.6 1,124,247 + Psyr_0992 0.11 -1.9 1,124,383 + Psyr_0992 0.21 +3.1 1,124,384 - Psyr_0992 0.21 -2.1 1,124,384 - Psyr_0992 0.21 +0.1 1,124,384 - Psyr_0992 0.21 -2.1 1,124,384 - Psyr_0992 0.21 +5.0 1,124,701 + Psyr_0992 0.44 +3.8 1,124,701 + Psyr_0992 0.44 +4.1 1,124,701 + Psyr_0992 0.44 +3.8 1,124,701 + Psyr_0992 0.44 -1.0 1,124,702 - Psyr_0992 0.44 -0.0 1,124,702 - Psyr_0992 0.44 +3.6 1,124,776 + Psyr_0992 0.49 +3.6 1,124,776 + Psyr_0992 0.49 +0.3 1,124,777 - Psyr_0992 0.49 +3.3 1,124,777 - Psyr_0992 0.49 -1.8 1,124,777 - Psyr_0992 0.49 +0.3 1,124,831 + Psyr_0992 0.53 +1.6 1,124,831 + Psyr_0992 0.53 +0.3 1,124,832 - Psyr_0992 0.53 +1.6 1,124,832 - Psyr_0992 0.53 -1.6 1,124,878 + Psyr_0992 0.57 +3.0 1,124,878 + Psyr_0992 0.57 +0.9 1,124,878 + Psyr_0992 0.57 +4.2 1,124,879 - Psyr_0992 0.57 +3.1 1,124,924 - Psyr_0992 0.60 -2.8 1,124,924 - Psyr_0992 0.60 +2.0 1,124,980 + Psyr_0992 0.64 -2.0 1,124,980 + Psyr_0992 0.64 -3.3 1,124,980 + Psyr_0992 0.64 -1.7 1,124,980 + Psyr_0992 0.64 +3.9 1,124,980 + Psyr_0992 0.64 +1.7 1,124,980 + Psyr_0992 0.64 -1.7 1,124,981 - Psyr_0992 0.64 +2.0 1,124,981 - Psyr_0992 0.64 +1.6 1,124,981 - Psyr_0992 0.64 +2.3 1,124,981 - Psyr_0992 0.64 -1.6 1,124,981 - Psyr_0992 0.64 +1.0 1,124,981 - Psyr_0992 0.64 +2.8 1,124,981 - Psyr_0992 0.64 +3.3 1,125,002 - Psyr_0992 0.66 +1.6 1,125,034 + Psyr_0992 0.68 +0.6 1,125,034 + Psyr_0992 0.68 -3.3 1,125,035 - Psyr_0992 0.68 -2.2 1,125,035 - Psyr_0992 0.68 +3.1 1,125,183 + Psyr_0992 0.79 -2.5 1,125,183 + Psyr_0992 0.79 -1.6 1,125,183 + Psyr_0992 0.79 +0.6 1,125,183 + Psyr_0992 0.79 -1.4 1,125,183 + Psyr_0992 0.79 -1.0 1,125,183 + Psyr_0992 0.79 -2.8 1,125,183 + Psyr_0992 0.79 -0.0 1,125,183 + Psyr_0992 0.79 -2.8 1,125,184 - Psyr_0992 0.79 -0.2 1,125,184 - Psyr_0992 0.79 -0.0 1,125,184 - Psyr_0992 0.79 +2.8 1,125,184 - Psyr_0992 0.79 +0.2 1,125,184 - Psyr_0992 0.79 +5.4 1,125,184 - Psyr_0992 0.79 -1.5 1,125,184 - Psyr_0992 0.79 -2.0 1,125,187 + Psyr_0992 0.79 -1.1 1,125,187 + Psyr_0992 0.79 +1.1 1,125,187 + Psyr_0992 0.79 -1.0 1,125,187 + Psyr_0992 0.79 -0.6 1,125,187 + Psyr_0992 0.79 +0.6 1,125,187 + Psyr_0992 0.79 -1.2 1,125,188 - Psyr_0992 0.79 +0.5 1,125,188 - Psyr_0992 0.79 -0.0 1,125,188 - Psyr_0992 0.79 -0.7 1,125,188 - Psyr_0992 0.79 +0.1 1,125,247 + Psyr_0992 0.84 +0.4 1,125,248 - Psyr_0992 0.84 -0.0 1,125,298 + Psyr_0992 0.87 -0.0 1,125,298 + Psyr_0992 0.87 -2.6 1,125,302 - Psyr_0992 0.88 +0.3 1,125,314 + Psyr_0992 0.88 +3.4 1,125,315 - Psyr_0992 0.89 +3.8 1,125,315 - Psyr_0992 0.89 -1.3 1,125,315 - Psyr_0992 0.89 -0.0 1,125,315 - Psyr_0992 0.89 +0.2 1,125,341 - -1.0 1,125,362 - -2.3 1,125,362 - +1.0 1,125,400 + +1.0 1,125,473 - +2.3 1,125,563 + -1.5 1,125,563 + -1.2 1,125,563 + -2.0 1,125,563 + +1.6 1,125,563 + -1.8 1,125,563 + +3.3 1,125,564 - +3.8 1,125,564 - +2.0 1,125,564 - -1.1 1,125,565 + -0.0 1,125,565 + -2.2 1,125,565 + -0.3 1,125,565 + -0.2 1,125,565 + -1.1 1,125,565 + +0.0 1,125,565 + -0.0 1,125,565 + +4.7 1,125,565 + +2.0 1,125,565 + +1.0 1,125,565 + -0.0 1,125,565 + +1.0 1,125,566 - +0.8 1,125,566 - -0.0 1,125,566 - -3.4 1,125,566 - -4.3 1,125,566 - -2.0 1,125,566 - -0.7 1,125,566 - +3.0 1,125,566 - -2.8 1,125,668 - -0.0 1,125,771 + -0.0 1,125,913 + -0.0 1,125,913 + -0.2 1,125,914 - -1.2 1,125,914 - -2.1 1,126,127 - Psyr_0993 0.17 -0.7 1,126,127 - Psyr_0993 0.17 -0.7 1,126,127 - Psyr_0993 0.17 -2.1 1,126,127 - Psyr_0993 0.17 +4.0 1,126,198 + Psyr_0993 0.20 -1.4 1,126,198 + Psyr_0993 0.20 -2.4 1,126,198 + Psyr_0993 0.20 -0.0 1,126,199 - Psyr_0993 0.20 +2.0
Or see this region's nucleotide sequence