Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0965

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
1,097,348	+		Psyr_0963	0.36	-1.0
1,097,348	+		Psyr_0963	0.36	-1.3
1,097,348	+		Psyr_0963	0.36	+1.6
1,097,348	+		Psyr_0963	0.36	-1.5
1,097,348	+		Psyr_0963	0.36	+2.3
1,097,348	+		Psyr_0963	0.36	-0.4
1,097,348	+				-0.0
1,097,348	+		Psyr_0963	0.36	+2.0
1,097,348	+		Psyr_0963	0.36	-1.3
1,097,348	+		Psyr_0963	0.36	-0.0
1,097,349	-		Psyr_0963	0.36	+2.6
1,097,349	-		Psyr_0963	0.36	-1.6
1,097,349	-		Psyr_0963	0.36	-1.0
1,097,349	-		Psyr_0963	0.36	-1.8
1,097,349	-		Psyr_0963	0.36	-0.4
1,097,349	-		Psyr_0963	0.36	-3.7
1,097,349	-		Psyr_0963	0.36	-3.8
1,097,349	-		Psyr_0963	0.36	+2.0
1,097,349	-		Psyr_0963	0.36	-0.0
1,097,349	-		Psyr_0963	0.36	+1.0
1,097,384	+		Psyr_0963	0.40	-0.0
1,097,453	+		Psyr_0963	0.47	+2.0
1,097,558	+		Psyr_0963	0.58	-1.0
1,097,558	+		Psyr_0963	0.58	-5.2
1,097,558	+		Psyr_0963	0.58	-0.3
1,097,558	+		Psyr_0963	0.58	-2.4
1,097,558	+		Psyr_0963	0.58	+0.0
1,097,558	+		Psyr_0963	0.58	-1.3
1,097,559	-		Psyr_0963	0.58	-0.0
1,097,559	-		Psyr_0963	0.58	-0.0
1,097,559	-		Psyr_0963	0.58	+3.1
1,097,559	-		Psyr_0963	0.58	-2.5
1,097,559	-		Psyr_0963	0.58	+0.8
1,097,559	-		Psyr_0963	0.58	-2.3
1,097,559	-		Psyr_0963	0.58	-1.0
1,097,559	-		Psyr_0963	0.58	-1.2
1,097,559	-		Psyr_0963	0.58	+1.6
1,097,654	+		Psyr_0963	0.68	+1.6
1,097,655	-		Psyr_0963	0.68	-4.9
1,097,689	+		Psyr_0963	0.72	+2.6
1,097,689	+		Psyr_0963	0.72	+1.0
1,097,689	+		Psyr_0963	0.72	+2.6
1,097,689	+		Psyr_0963	0.72	+3.1
1,097,690	-		Psyr_0963	0.72	-0.9
1,097,690	-		Psyr_0963	0.72	-1.5
1,097,690	-		Psyr_0963	0.72	-0.5
1,097,843	+		Psyr_0963	0.88	-0.9
1,097,843	+		Psyr_0963	0.88	+2.0
1,097,844	-		Psyr_0963	0.88	+2.3
1,097,862	+		Psyr_0963	0.90	-1.5
1,097,863	-				+3.1
1,097,863	-				+0.1
1,097,975	+				-0.4
1,097,994	+				-2.9
1,098,006	+				-0.0
1,098,032	+				-0.0
1,098,032	+				-0.4
1,098,032	+				-0.8
1,098,032	+				-1.7
1,098,033	-				-0.0
1,098,033	-				-0.5
1,098,033	-				-0.2
1,098,033	-				-0.0
1,098,038	+				+3.9
1,098,039	-				-0.0
1,098,039	-				-2.7
1,098,057	-				+1.6
1,098,083	+				-0.8
1,098,083	+				-1.3
1,098,084	-				-2.4
1,098,105	+		Psyr_0964	0.11	-0.0
1,098,105	+		Psyr_0964	0.11	-1.7
1,098,105	+		Psyr_0964	0.11	+2.6
1,098,105	+		Psyr_0964	0.11	+1.0
1,098,105	+		Psyr_0964	0.11	+2.3
1,098,105	+		Psyr_0964	0.11	+3.0
1,098,105	+		Psyr_0964	0.11	+1.0
1,098,105	+		Psyr_0964	0.11	-1.6
1,098,105	+		Psyr_0964	0.11	-1.0
1,098,105	+		Psyr_0964	0.11	-0.9
1,098,105	+		Psyr_0964	0.11	-0.0
1,098,106	-		Psyr_0964	0.11	-2.6
1,098,106	-		Psyr_0964	0.11	-0.1
1,098,106	-		Psyr_0964	0.11	-0.1
1,098,106	-		Psyr_0964	0.11	+0.8
1,098,106	-		Psyr_0964	0.11	+0.5
1,098,106	-		Psyr_0964	0.11	-1.2
1,098,172	+		Psyr_0964	0.42	-2.5
1,098,172	+		Psyr_0964	0.42	+2.3
1,098,172	+		Psyr_0964	0.42	-1.1
1,098,172	+		Psyr_0964	0.42	-0.0
1,098,388	+				+0.5
1,098,388	+				-2.6
1,098,388	+				+3.6
1,098,388	+				+1.0
1,098,389	-				+4.0
1,098,389	-				+4.6
1,098,389	-				-1.5
1,098,389	-				-0.2
1,098,389	-				-4.2
1,098,389	-				-2.3
1,098,389	-				+3.8
1,098,389	-				-3.0
1,098,448	+		Psyr_0965	0.16	-0.2
1,098,448	+		Psyr_0965	0.16	+1.8
1,098,448	+		Psyr_0965	0.16	+4.1
1,098,449	-		Psyr_0965	0.16	-0.9
1,098,449	-		Psyr_0965	0.16	+0.3
1,098,449	-		Psyr_0965	0.16	-1.0
1,098,449	-		Psyr_0965	0.16	+0.1
1,098,600	-		Psyr_0965	0.31	-0.3
1,098,948	-		Psyr_0965	0.66	+1.8
1,099,024	+		Psyr_0965	0.74	+4.6
1,099,024	+		Psyr_0965	0.74	-0.5
1,099,111	+		Psyr_0965	0.83	+3.8
1,099,111	+		Psyr_0965	0.83	-0.9
1,099,112	-		Psyr_0965	0.83	+0.2
1,099,112	-		Psyr_0965	0.83	-0.9
1,099,112	-		Psyr_0965	0.83	-0.9
1,099,160	+		Psyr_0965	0.88	+0.4
1,099,160	+		Psyr_0965	0.88	-2.2
1,099,160	+		Psyr_0965	0.88	-2.2
1,099,160	+		Psyr_0965	0.88	+3.3
1,099,160	+		Psyr_0965	0.88	-0.6
1,099,160	+		Psyr_0965	0.88	+2.3
1,099,160	+		Psyr_0965	0.88	-1.3
1,099,161	-		Psyr_0965	0.88	+3.7
1,099,161	-		Psyr_0965	0.88	+0.0
1,099,218	-				+3.8
1,099,280	+				+0.5
1,099,280	+				-0.9
1,099,281	-				-0.0
1,099,322	-				-2.4
1,099,331	-				+2.6
1,099,350	+				+3.0
1,099,351	-				+2.0
1,099,463	+				+3.3
1,099,463	+				+1.1
1,099,525	+				+2.0
1,099,525	+				-1.8
1,099,526	-				+0.3
1,099,526	-				-2.9
1,099,526	-				-0.0
1,099,526	-				-2.7
1,099,531	+				+3.8
1,099,531	+				+1.7
1,099,532	-				+1.8
1,099,532	-				-0.6
1,099,546	+				+2.5
1,099,546	+				-0.0
1,099,546	+				+0.6
1,099,547	-				-0.0
1,099,547	-				-0.9
1,099,547	-				-2.4
1,099,547	-				-1.3
1,099,547	-				+3.0
1,099,576	+				+4.5
1,099,576	+				-0.4
1,099,576	+				+2.5
1,099,576	+				+2.5
1,099,576	+				+1.5
1,099,576	+				+1.5
1,099,576	+				-0.8
1,099,576	+				-0.8
1,099,577	-				-2.4
1,099,577	-				+2.5
1,099,577	-				-2.8
1,099,577	-				-2.2
1,099,577	-				+4.4
1,099,577	-				-1.2
1,099,577	-				-2.3
1,099,577	-				-4.1
1,099,592	+				+2.2
1,099,593	-				+3.5
1,099,655	-				-0.0
1,100,050	+		Psyr_0966	0.53	+4.1
1,100,203	+		Psyr_0966	0.70	+4.1
1,100,229	+		Psyr_0966	0.73	+2.5
1,100,229	+		Psyr_0966	0.73	+4.3
1,100,229	+		Psyr_0966	0.73	+4.5
1,100,229	+		Psyr_0966	0.73	+3.9
1,100,229	+		Psyr_0966	0.73	+0.2
1,100,229	+		Psyr_0966	0.73	-0.6
1,100,229	+		Psyr_0966	0.73	+3.1
1,100,229	+		Psyr_0966	0.73	+0.5
1,100,229	+		Psyr_0966	0.73	+0.0
1,100,229	+		Psyr_0966	0.73	+4.2
1,100,230	-		Psyr_0966	0.73	+2.5
1,100,230	-		Psyr_0966	0.73	-0.0
1,100,231	+		Psyr_0966	0.73	+0.2
1,100,231	+		Psyr_0966	0.73	+5.1
1,100,231	+		Psyr_0966	0.73	-0.2
1,100,231	+		Psyr_0966	0.73	+0.5
1,100,232	-		Psyr_0966	0.73	+2.3
1,100,232	-		Psyr_0966	0.73	+0.4