Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0823 and Psyr_0824 are separated by 39 nucleotides Psyr_0824 and Psyr_0825 are separated by 107 nucleotides
Psyr_0823: Psyr_0823 - PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family, at 930,606 to 932,348
_0823
Psyr_0824: Psyr_0824 - acetyl-CoA acetyltransferase, at 932,388 to 933,566
_0824
Psyr_0825: Psyr_0825 - conserved hypothetical protein, at 933,674 to 934,540
_0825
Position (kb) 932
933
934 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 931.577 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.743 kb on + strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.744 kb on - strand, within Psyr_0823 at 931.926 kb on + strand, within Psyr_0823 at 931.926 kb on + strand, within Psyr_0823 at 931.927 kb on - strand, within Psyr_0823 at 931.927 kb on - strand, within Psyr_0823 at 931.927 kb on - strand, within Psyr_0823 at 931.988 kb on + strand, within Psyr_0823 at 931.988 kb on + strand, within Psyr_0823 at 931.989 kb on - strand, within Psyr_0823 at 932.163 kb on + strand, within Psyr_0823 at 932.163 kb on + strand, within Psyr_0823 at 932.163 kb on + strand, within Psyr_0823 at 932.163 kb on + strand, within Psyr_0823 at 932.164 kb on - strand, within Psyr_0823 at 932.164 kb on - strand, within Psyr_0823 at 932.164 kb on - strand, within Psyr_0823 at 932.164 kb on - strand, within Psyr_0823 at 932.245 kb on - strand at 932.289 kb on + strand at 932.289 kb on + strand at 932.289 kb on + strand at 932.289 kb on + strand at 932.290 kb on - strand at 932.290 kb on - strand at 932.290 kb on - strand at 932.290 kb on - strand at 932.783 kb on + strand, within Psyr_0824 at 933.064 kb on + strand, within Psyr_0824 at 933.065 kb on - strand, within Psyr_0824 at 933.065 kb on - strand, within Psyr_0824 at 933.103 kb on + strand, within Psyr_0824 at 933.103 kb on + strand, within Psyr_0824 at 933.103 kb on + strand, within Psyr_0824 at 933.104 kb on - strand, within Psyr_0824 at 933.199 kb on + strand, within Psyr_0824 at 933.199 kb on + strand, within Psyr_0824 at 933.199 kb on + strand, within Psyr_0824 at 933.199 kb on + strand, within Psyr_0824 at 933.200 kb on - strand, within Psyr_0824 at 933.200 kb on - strand, within Psyr_0824 at 933.200 kb on - strand, within Psyr_0824 at 933.200 kb on - strand, within Psyr_0824 at 933.585 kb on + strand at 933.611 kb on - strand at 933.611 kb on - strand at 933.611 kb on - strand at 933.745 kb on + strand at 933.963 kb on + strand, within Psyr_0825 at 933.963 kb on + strand, within Psyr_0825 at 933.963 kb on + strand, within Psyr_0825 at 933.964 kb on - strand, within Psyr_0825 at 934.038 kb on + strand, within Psyr_0825 at 934.038 kb on + strand, within Psyr_0825 at 934.041 kb on + strand, within Psyr_0825 at 934.041 kb on + strand, within Psyr_0825 at 934.041 kb on + strand, within Psyr_0825 at 934.042 kb on - strand, within Psyr_0825 at 934.080 kb on + strand, within Psyr_0825 at 934.118 kb on + strand, within Psyr_0825 at 934.119 kb on - strand, within Psyr_0825 at 934.158 kb on + strand, within Psyr_0825 at 934.241 kb on - strand, within Psyr_0825 at 934.248 kb on + strand, within Psyr_0825 at 934.248 kb on + strand, within Psyr_0825 at 934.248 kb on + strand, within Psyr_0825 at 934.249 kb on - strand, within Psyr_0825
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 931,577 + Psyr_0823 0.56 +4.1 931,743 + Psyr_0823 0.65 +3.2 931,743 + Psyr_0823 0.65 +2.1 931,743 + Psyr_0823 0.65 -5.4 931,743 + Psyr_0823 0.65 +1.1 931,743 + Psyr_0823 0.65 -2.3 931,743 + Psyr_0823 0.65 +4.6 931,743 + Psyr_0823 0.65 -4.1 931,743 + Psyr_0823 0.65 -1.0 931,743 + Psyr_0823 0.65 +1.0 931,743 + Psyr_0823 0.65 +2.1 931,744 - Psyr_0823 0.65 -2.6 931,744 - Psyr_0823 0.65 +3.2 931,744 - Psyr_0823 0.65 +1.1 931,744 - Psyr_0823 0.65 +0.4 931,744 - Psyr_0823 0.65 +2.4 931,744 - Psyr_0823 0.65 -1.6 931,744 - Psyr_0823 0.65 -1.3 931,744 - Psyr_0823 0.65 +1.1 931,926 + Psyr_0823 0.76 +2.1 931,926 + Psyr_0823 0.76 +4.4 931,927 - Psyr_0823 0.76 +1.6 931,927 - Psyr_0823 0.76 +0.1 931,927 - Psyr_0823 0.76 +1.1 931,988 + Psyr_0823 0.79 -3.8 931,988 + Psyr_0823 0.79 +1.0 931,989 - Psyr_0823 0.79 +0.1 932,163 + Psyr_0823 0.89 +2.5 932,163 + Psyr_0823 0.89 -1.2 932,163 + Psyr_0823 0.89 -2.2 932,163 + Psyr_0823 0.89 +2.4 932,164 - Psyr_0823 0.89 +3.5 932,164 - Psyr_0823 0.89 +4.0 932,164 - Psyr_0823 0.89 +2.6 932,164 - Psyr_0823 0.89 +3.8 932,245 - +2.9 932,289 + -0.9 932,289 + +4.1 932,289 + +3.1 932,289 + -1.1 932,290 - +0.1 932,290 - +0.9 932,290 - -4.2 932,290 - -2.2 932,783 + Psyr_0824 0.34 -1.4 933,064 + Psyr_0824 0.57 -0.7 933,065 - Psyr_0824 0.57 +0.4 933,065 - Psyr_0824 0.57 +0.1 933,103 + Psyr_0824 0.61 -3.1 933,103 + Psyr_0824 0.61 +1.1 933,103 + Psyr_0824 0.61 +2.1 933,104 - Psyr_0824 0.61 -1.7 933,199 + Psyr_0824 0.69 -3.1 933,199 + Psyr_0824 0.69 +3.4 933,199 + Psyr_0824 0.69 +3.9 933,199 + Psyr_0824 0.69 -1.2 933,200 - Psyr_0824 0.69 +0.3 933,200 - Psyr_0824 0.69 +0.3 933,200 - Psyr_0824 0.69 +3.1 933,200 - Psyr_0824 0.69 +2.9 933,585 + +3.1 933,611 - -0.6 933,611 - -1.6 933,611 - +0.1 933,745 + +0.4 933,963 + Psyr_0825 0.33 +3.5 933,963 + Psyr_0825 0.33 -1.6 933,963 + Psyr_0825 0.33 +2.6 933,964 - Psyr_0825 0.33 +3.9 934,038 + Psyr_0825 0.42 -0.7 934,038 + Psyr_0825 0.42 -1.1 934,041 + Psyr_0825 0.42 +0.1 934,041 + Psyr_0825 0.42 +0.9 934,041 + Psyr_0825 0.42 +4.4 934,042 - Psyr_0825 0.42 -1.1 934,080 + Psyr_0825 0.47 +0.6 934,118 + Psyr_0825 0.51 -1.6 934,119 - Psyr_0825 0.51 +0.2 934,158 + Psyr_0825 0.56 +0.1 934,241 - Psyr_0825 0.65 -2.5 934,248 + Psyr_0825 0.66 -2.2 934,248 + Psyr_0825 0.66 +0.5 934,248 + Psyr_0825 0.66 -0.5 934,249 - Psyr_0825 0.66 -0.5
Or see this region's nucleotide sequence