Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0802 and Psyr_0803 are separated by 66 nucleotides Psyr_0803 and Psyr_0804 overlap by 8 nucleotides Psyr_0804 and Psyr_0805 overlap by 8 nucleotides
Psyr_0802: Psyr_0802 - Peptidase S1, chymotrypsin, at 907,741 to 908,880
_0802
Psyr_0803: Psyr_0803 - conserved hypothetical protein, at 908,947 to 910,080
_0803
Psyr_0804: Psyr_0804 - conserved hypothetical protein, at 910,073 to 910,831
_0804
Psyr_0805: Psyr_0805 - conserved hypothetical protein, at 910,824 to 911,918
_0805
Position (kb) 908
909
910
911 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.008 kb on + strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.009 kb on - strand, within Psyr_0802 at 908.014 kb on + strand, within Psyr_0802 at 908.015 kb on - strand, within Psyr_0802 at 908.015 kb on - strand, within Psyr_0802 at 908.015 kb on - strand, within Psyr_0802 at 908.015 kb on - strand, within Psyr_0802 at 908.134 kb on + strand, within Psyr_0802 at 908.134 kb on + strand, within Psyr_0802 at 908.135 kb on - strand, within Psyr_0802 at 908.186 kb on - strand, within Psyr_0802 at 908.365 kb on + strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.366 kb on - strand, within Psyr_0802 at 908.389 kb on + strand, within Psyr_0802 at 908.389 kb on + strand, within Psyr_0802 at 908.473 kb on - strand, within Psyr_0802 at 908.508 kb on + strand, within Psyr_0802 at 908.577 kb on + strand, within Psyr_0802 at 908.812 kb on + strand at 908.812 kb on + strand at 908.812 kb on + strand at 908.813 kb on - strand at 908.942 kb on + strand at 908.976 kb on + strand at 908.976 kb on + strand at 908.977 kb on - strand at 908.977 kb on - strand at 909.252 kb on - strand, within Psyr_0803 at 909.252 kb on - strand, within Psyr_0803 at 909.262 kb on + strand, within Psyr_0803 at 909.262 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.289 kb on + strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.290 kb on - strand, within Psyr_0803 at 909.564 kb on + strand, within Psyr_0803 at 909.613 kb on + strand, within Psyr_0803 at 909.613 kb on + strand, within Psyr_0803 at 909.614 kb on - strand, within Psyr_0803 at 909.614 kb on - strand, within Psyr_0803 at 909.788 kb on + strand, within Psyr_0803 at 909.788 kb on + strand, within Psyr_0803 at 909.788 kb on + strand, within Psyr_0803 at 909.788 kb on + strand, within Psyr_0803 at 909.788 kb on + strand, within Psyr_0803 at 909.788 kb on + strand, within Psyr_0803 at 909.937 kb on + strand, within Psyr_0803 at 909.937 kb on + strand, within Psyr_0803 at 909.937 kb on + strand, within Psyr_0803 at 909.938 kb on - strand, within Psyr_0803 at 909.938 kb on - strand, within Psyr_0803 at 909.938 kb on - strand, within Psyr_0803 at 909.938 kb on - strand, within Psyr_0803 at 909.938 kb on - strand, within Psyr_0803 at 909.964 kb on + strand, within Psyr_0803 at 909.964 kb on + strand, within Psyr_0803 at 909.964 kb on + strand, within Psyr_0803 at 909.965 kb on - strand, within Psyr_0803 at 910.199 kb on + strand, within Psyr_0804 at 910.199 kb on + strand, within Psyr_0804 at 910.199 kb on + strand, within Psyr_0804 at 910.200 kb on - strand, within Psyr_0804 at 910.200 kb on - strand, within Psyr_0804 at 910.286 kb on + strand, within Psyr_0804 at 910.287 kb on - strand, within Psyr_0804 at 910.287 kb on - strand, within Psyr_0804 at 910.514 kb on + strand, within Psyr_0804 at 910.514 kb on + strand, within Psyr_0804 at 910.515 kb on - strand, within Psyr_0804 at 910.515 kb on - strand, within Psyr_0804 at 910.515 kb on - strand, within Psyr_0804 at 910.563 kb on + strand, within Psyr_0804 at 910.563 kb on + strand, within Psyr_0804 at 910.564 kb on - strand, within Psyr_0804 at 910.564 kb on - strand, within Psyr_0804 at 910.564 kb on - strand, within Psyr_0804 at 910.600 kb on + strand, within Psyr_0804 at 910.601 kb on - strand, within Psyr_0804 at 910.606 kb on + strand, within Psyr_0804 at 910.606 kb on + strand, within Psyr_0804 at 910.607 kb on - strand, within Psyr_0804 at 910.607 kb on - strand, within Psyr_0804 at 910.869 kb on + strand at 910.870 kb on - strand at 910.870 kb on - strand at 910.870 kb on - strand at 910.968 kb on + strand, within Psyr_0805 at 910.968 kb on + strand, within Psyr_0805 at 911.022 kb on + strand, within Psyr_0805 at 911.022 kb on + strand, within Psyr_0805 at 911.023 kb on - strand, within Psyr_0805 at 911.023 kb on - strand, within Psyr_0805 at 911.023 kb on - strand, within Psyr_0805 at 911.023 kb on - strand, within Psyr_0805 at 911.068 kb on + strand, within Psyr_0805 at 911.068 kb on + strand, within Psyr_0805 at 911.068 kb on + strand, within Psyr_0805 at 911.068 kb on + strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805 at 911.069 kb on - strand, within Psyr_0805
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 908,008 + Psyr_0802 0.23 -2.2 908,008 + Psyr_0802 0.23 +0.2 908,008 + Psyr_0802 0.23 -2.5 908,008 + Psyr_0802 0.23 +2.8 908,008 + Psyr_0802 0.23 -0.5 908,008 + Psyr_0802 0.23 -0.9 908,008 + Psyr_0802 0.23 +4.4 908,008 + Psyr_0802 0.23 -1.4 908,008 + Psyr_0802 0.23 -0.0 908,008 + Psyr_0802 0.23 -1.1 908,008 + Psyr_0802 0.23 -0.9 908,008 + Psyr_0802 0.23 +2.3 908,008 + Psyr_0802 0.23 -2.2 908,008 + Psyr_0802 0.23 -1.7 908,008 + Psyr_0802 0.23 -1.1 908,008 + Psyr_0802 0.23 -2.5 908,008 + Psyr_0802 0.23 +4.0 908,008 + Psyr_0802 0.23 -0.0 908,009 - Psyr_0802 0.24 -1.9 908,009 - Psyr_0802 0.24 -0.6 908,009 - Psyr_0802 0.24 -1.0 908,009 - Psyr_0802 0.24 +1.0 908,009 - Psyr_0802 0.24 -0.0 908,009 - Psyr_0802 0.24 +2.3 908,009 - Psyr_0802 0.24 +3.0 908,009 - Psyr_0802 0.24 -0.0 908,009 - Psyr_0802 0.24 -2.6 908,009 - Psyr_0802 0.24 -2.1 908,009 - Psyr_0802 0.24 -0.4 908,009 - Psyr_0802 0.24 -2.2 908,009 - Psyr_0802 0.24 -4.8 908,009 - Psyr_0802 0.24 -0.0 908,009 - Psyr_0802 0.24 +0.7 908,009 - Psyr_0802 0.24 -4.5 908,009 - Psyr_0802 0.24 -0.7 908,014 + Psyr_0802 0.24 -1.8 908,015 - Psyr_0802 0.24 -1.8 908,015 - Psyr_0802 0.24 +1.6 908,015 - Psyr_0802 0.24 -3.9 908,015 - Psyr_0802 0.24 -4.2 908,134 + Psyr_0802 0.34 +0.7 908,134 + Psyr_0802 0.34 -1.1 908,135 - Psyr_0802 0.35 -1.8 908,186 - Psyr_0802 0.39 -1.8 908,365 + Psyr_0802 0.55 -1.5 908,366 - Psyr_0802 0.55 +1.0 908,366 - Psyr_0802 0.55 -0.9 908,366 - Psyr_0802 0.55 +0.1 908,366 - Psyr_0802 0.55 +0.6 908,366 - Psyr_0802 0.55 +0.5 908,366 - Psyr_0802 0.55 -0.0 908,366 - Psyr_0802 0.55 -0.6 908,366 - Psyr_0802 0.55 -0.0 908,366 - Psyr_0802 0.55 -1.7 908,366 - Psyr_0802 0.55 -2.1 908,389 + Psyr_0802 0.57 -0.3 908,389 + Psyr_0802 0.57 +4.6 908,473 - Psyr_0802 0.64 +4.0 908,508 + Psyr_0802 0.67 -2.6 908,577 + Psyr_0802 0.73 -3.2 908,812 + +3.2 908,812 + -1.7 908,812 + -2.0 908,813 - -2.6 908,942 + -0.7 908,976 + +0.2 908,976 + +3.6 908,977 - +1.0 908,977 - -0.0 909,252 - Psyr_0803 0.27 +2.0 909,252 - Psyr_0803 0.27 -4.3 909,262 + Psyr_0803 0.28 -0.5 909,262 + Psyr_0803 0.28 -0.6 909,289 + Psyr_0803 0.30 +1.1 909,289 + Psyr_0803 0.30 +4.5 909,289 + Psyr_0803 0.30 -0.7 909,289 + Psyr_0803 0.30 -1.5 909,289 + Psyr_0803 0.30 +0.2 909,289 + Psyr_0803 0.30 -2.3 909,289 + Psyr_0803 0.30 -0.0 909,289 + Psyr_0803 0.30 -0.7 909,289 + Psyr_0803 0.30 -0.8 909,289 + Psyr_0803 0.30 +3.0 909,289 + Psyr_0803 0.30 -3.3 909,289 + Psyr_0803 0.30 -0.7 909,289 + Psyr_0803 0.30 -0.3 909,289 + Psyr_0803 0.30 -1.9 909,289 + Psyr_0803 0.30 -4.2 909,289 + Psyr_0803 0.30 -1.2 909,289 + Psyr_0803 0.30 +4.5 909,289 + Psyr_0803 0.30 +4.0 909,289 + Psyr_0803 0.30 -0.5 909,289 + Psyr_0803 0.30 -2.6 909,289 + Psyr_0803 0.30 +0.6 909,289 + Psyr_0803 0.30 -2.5 909,290 - Psyr_0803 0.30 +3.7 909,290 - Psyr_0803 0.30 -0.9 909,290 - Psyr_0803 0.30 +0.6 909,290 - Psyr_0803 0.30 +1.5 909,290 - Psyr_0803 0.30 -2.1 909,290 - Psyr_0803 0.30 -2.4 909,290 - Psyr_0803 0.30 +2.3 909,290 - Psyr_0803 0.30 +3.6 909,290 - Psyr_0803 0.30 -2.0 909,290 - Psyr_0803 0.30 -0.0 909,290 - Psyr_0803 0.30 -0.2 909,564 + Psyr_0803 0.54 +2.8 909,613 + Psyr_0803 0.59 -3.9 909,613 + Psyr_0803 0.59 -3.6 909,614 - Psyr_0803 0.59 -1.6 909,614 - Psyr_0803 0.59 +2.3 909,788 + Psyr_0803 0.74 -3.2 909,788 + Psyr_0803 0.74 -0.8 909,788 + Psyr_0803 0.74 -3.1 909,788 + Psyr_0803 0.74 -1.0 909,788 + Psyr_0803 0.74 -0.0 909,788 + Psyr_0803 0.74 +3.9 909,937 + Psyr_0803 0.87 -1.8 909,937 + Psyr_0803 0.87 -1.0 909,937 + Psyr_0803 0.87 -3.2 909,938 - Psyr_0803 0.87 -0.0 909,938 - Psyr_0803 0.87 -2.9 909,938 - Psyr_0803 0.87 -1.4 909,938 - Psyr_0803 0.87 +2.8 909,938 - Psyr_0803 0.87 +4.2 909,964 + Psyr_0803 0.90 -1.6 909,964 + Psyr_0803 0.90 +3.7 909,964 + Psyr_0803 0.90 -1.3 909,965 - Psyr_0803 0.90 -0.0 910,199 + Psyr_0804 0.17 +0.5 910,199 + Psyr_0804 0.17 +0.6 910,199 + Psyr_0804 0.17 +0.9 910,200 - Psyr_0804 0.17 -0.2 910,200 - Psyr_0804 0.17 +0.0 910,286 + Psyr_0804 0.28 +4.5 910,287 - Psyr_0804 0.28 -2.0 910,287 - Psyr_0804 0.28 -1.4 910,514 + Psyr_0804 0.58 -2.6 910,514 + Psyr_0804 0.58 +3.5 910,515 - Psyr_0804 0.58 +0.0 910,515 - Psyr_0804 0.58 -0.4 910,515 - Psyr_0804 0.58 +3.2 910,563 + Psyr_0804 0.65 +0.0 910,563 + Psyr_0804 0.65 +2.8 910,564 - Psyr_0804 0.65 -2.3 910,564 - Psyr_0804 0.65 +1.0 910,564 - Psyr_0804 0.65 +2.0 910,600 + Psyr_0804 0.69 -3.9 910,601 - Psyr_0804 0.70 -0.8 910,606 + Psyr_0804 0.70 +0.5 910,606 + Psyr_0804 0.70 -1.0 910,607 - Psyr_0804 0.70 +3.2 910,607 - Psyr_0804 0.70 -1.5 910,869 + -1.4 910,870 - -1.5 910,870 - -2.8 910,870 - +0.0 910,968 + Psyr_0805 0.13 -0.6 910,968 + Psyr_0805 0.13 -2.1 911,022 + Psyr_0805 0.18 -0.3 911,022 + Psyr_0805 0.18 -1.9 911,023 - Psyr_0805 0.18 +2.6 911,023 - Psyr_0805 0.18 +0.0 911,023 - Psyr_0805 0.18 +2.3 911,023 - Psyr_0805 0.18 -2.5 911,068 + Psyr_0805 0.22 +3.8 911,068 + Psyr_0805 0.22 -1.4 911,068 + Psyr_0805 0.22 +3.0 911,068 + Psyr_0805 0.22 +2.0 911,069 - Psyr_0805 0.22 -4.2 911,069 - Psyr_0805 0.22 +1.6 911,069 - Psyr_0805 0.22 +1.0 911,069 - Psyr_0805 0.22 +0.8 911,069 - Psyr_0805 0.22 +4.0 911,069 - Psyr_0805 0.22 -1.5 911,069 - Psyr_0805 0.22 -1.5 911,069 - Psyr_0805 0.22 -2.2 911,069 - Psyr_0805 0.22 +2.0
Or see this region's nucleotide sequence