Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0743

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
845,994	+		Psyr_0742	0.36	-1.9
846,032	+		Psyr_0742	0.40	-1.5
846,163	+		Psyr_0742	0.56	-2.7
846,163	+		Psyr_0742	0.56	+3.6
846,283	+		Psyr_0742	0.70	+1.6
846,283	+		Psyr_0742	0.70	+3.9
846,284	-		Psyr_0742	0.71	+0.9
846,284	-		Psyr_0742	0.71	-1.7
846,284	-		Psyr_0742	0.71	+3.5
846,284	-		Psyr_0742	0.71	-3.1
846,284	-		Psyr_0742	0.71	-1.6
846,284	-		Psyr_0742	0.71	+0.7
846,284	-		Psyr_0742	0.71	-0.4
846,284	-		Psyr_0742	0.71	+0.4
846,321	-		Psyr_0742	0.75	-0.0
846,321	-		Psyr_0742	0.75	-1.0
846,321	-		Psyr_0742	0.75	-0.0
846,327	+		Psyr_0742	0.76	-0.0
846,327	+		Psyr_0742	0.76	+1.0
846,327	+		Psyr_0742	0.76	-0.3
846,327	+		Psyr_0742	0.76	-2.1
846,327	+		Psyr_0742	0.76	-2.7
846,328	-		Psyr_0742	0.76	+0.6
846,328	-		Psyr_0742	0.76	-1.7
846,328	-		Psyr_0742	0.76	+1.5
846,328	-		Psyr_0742	0.76	+2.6
846,328	-		Psyr_0742	0.76	+2.8
846,328	-		Psyr_0742	0.76	+2.0
846,365	+		Psyr_0742	0.80	-1.3
846,365	+		Psyr_0742	0.80	-1.3
846,481	-				+1.6
846,518	+				-1.6
846,543	+				+1.6
846,545	+				+3.0
846,545	+				-0.6
846,545	+				+2.6
846,545	+				+1.6
846,545	+				+3.7
846,545	+				-3.6
846,545	+				-1.0
846,545	+				-1.9
846,545	+				-0.0
846,546	-				-3.0
846,546	-				+0.3
846,546	-				-0.4
846,546	-				-1.9
846,546	-				+1.0
846,558	-				+3.0
846,566	+				-3.8
846,593	+				-3.0
846,593	+				-3.2
846,593	+				-0.0
846,593	+				-0.0
846,593	+				-0.0
846,593	+				-1.3
846,593	+				-1.9
846,593	+				-4.0
846,594	-				+1.0
846,594	-				+0.5
846,594	-				+0.2
846,594	-				-2.9
846,594	-				+1.6
846,594	-				-0.8
846,594	-				+2.6
846,594	-				+1.0
846,594	-				-2.5
846,595	+				-2.8
846,595	+				+2.6
846,595	+				+2.3
846,596	-				-0.4
846,659	+				+1.0
846,741	-				-1.3
846,754	+				+0.3
846,754	+				+0.8
846,754	+				+1.0
846,754	+				+1.0
846,754	+				-0.9
846,754	+				-1.9
846,754	+				+0.1
846,754	+				-0.9
846,754	+				-1.2
846,754	+				-1.8
846,754	+				+3.9
846,755	-				-2.6
846,755	-				-1.9
846,755	-				-1.0
846,755	-				-0.5
846,755	-				+3.3
846,755	-				-0.2
846,755	-				-0.4
846,755	-				+3.5
846,755	-				+1.0
846,756	+				+0.0
846,756	+				-1.1
846,756	+				-3.1
846,756	+				+0.1
846,756	+				+1.0
846,756	+				-0.9
846,756	+				-3.4
846,756	+				-2.2
846,756	+				+2.0
846,756	+				+0.6
846,756	+				-1.8
846,756	+				+3.3
846,756	+				+2.3
846,756	+				-0.7
846,756	+				-0.3
846,756	+				-1.9
846,757	-				+2.0
846,757	-				-2.3
846,757	-				-1.4
846,757	-				+1.6
846,757	-				+2.3
846,757	-				-1.2
846,757	-				-0.7
846,757	-				-2.5
846,757	-				-3.9
846,757	-				-3.5
846,757	-				-1.1
846,757	-				-2.2
846,757	-				-1.1
846,759	+				+0.3
846,760	-				-1.9
846,760	-				+3.0
846,760	-				-0.6
846,774	+				-1.3
846,774	+				+2.0
846,774	+				+1.3
846,775	-				+1.4
846,775	-				-1.9
846,775	-				-1.1
846,933	-				-1.5
846,981	+				-0.4
846,981	+				-1.2
846,981	+				-1.8
846,981	+				-3.0
846,981	+				-0.7
846,982	-				-2.4
846,982	-				-1.1
846,982	-				-0.7
846,982	-				-3.2
846,982	-				+0.0
846,994	+				-0.6
846,994	+				-1.6
846,994	+				-2.2
846,994	+				+1.0
846,994	+				+2.0
846,994	+				+2.3
846,994	+				-0.7
846,995	-				+1.6
846,995	-				-0.3
847,232	+		Psyr_0743	0.64	+4.3
847,232	+		Psyr_0743	0.64	+2.6
847,232	+		Psyr_0743	0.64	-1.0
847,232	+		Psyr_0743	0.64	-1.8
847,233	-		Psyr_0743	0.65	+1.5
847,233	-		Psyr_0743	0.65	+1.6
847,233	-		Psyr_0743	0.65	-1.6
847,233	-		Psyr_0743	0.65	+3.2
847,233	-		Psyr_0743	0.65	-2.1
847,233	-		Psyr_0743	0.65	+3.5
847,235	+		Psyr_0743	0.65	+2.0
847,236	-		Psyr_0743	0.65	-1.0
847,236	-		Psyr_0743	0.65	-1.5
847,236	-		Psyr_0743	0.65	-2.0
847,370	+				+0.0
847,371	-				-4.3
847,454	-				-3.1
847,468	+				+0.7
847,468	+				+0.0
847,469	-				+3.7
847,469	-				+0.0
847,469	-				-5.1
847,469	-				+0.0
847,585	+		Psyr_0744	0.19	-3.5
847,586	-		Psyr_0744	0.19	-1.9
847,613	+		Psyr_0744	0.23	-1.6
847,613	+		Psyr_0744	0.23	+2.0
847,675	+		Psyr_0744	0.32	-3.5
847,675	+		Psyr_0744	0.32	-2.4
847,675	+		Psyr_0744	0.32	+3.3
847,726	+		Psyr_0744	0.39	-0.0
847,726	+		Psyr_0744	0.39	-2.3
847,726	+		Psyr_0744	0.39	+2.3
847,726	+		Psyr_0744	0.39	-0.9
847,727	-		Psyr_0744	0.39	-3.8
847,727	-		Psyr_0744	0.39	+1.6
847,727	-		Psyr_0744	0.39	+2.3
847,727	-		Psyr_0744	0.39	+2.8
847,727	-		Psyr_0744	0.39	+3.0
847,809	+		Psyr_0744	0.51	-3.9
847,810	-		Psyr_0744	0.51	+2.3
847,810	-		Psyr_0744	0.51	-3.1
847,810	-		Psyr_0744	0.51	-2.8
847,810	-		Psyr_0744	0.51	+3.0
848,084	+				-2.4
848,084	+				-0.9
848,084	+				+0.5
848,084	+				-2.3
848,088	+				+2.8
848,088	+				-0.8
848,088	+				+1.0
848,101	+				+1.0
848,102	-				-4.7
848,133	-				-3.8
848,153	+				+4.0
848,153	+				-2.7
848,153	+				-0.5
848,153	+				-2.9
848,153	+				+2.6
848,153	+				+2.0
848,153	+				-1.3
848,153	+				-1.1
848,153	+				-2.3
848,153	+				-1.4
848,153	+				-0.0
848,154	-		Psyr_0745	0.23	-0.0
848,154	-		Psyr_0745	0.23	+0.2
848,154	-		Psyr_0745	0.23	+1.9
848,154	-		Psyr_0745	0.23	-3.1
848,154	-		Psyr_0745	0.23	-0.7
848,154	-		Psyr_0745	0.23	-0.3
848,154	-		Psyr_0745	0.23	+2.6
848,154	-		Psyr_0745	0.23	-1.1
848,187	-		Psyr_0745	0.29	-3.2