Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0725 and Psyr_0726 are separated by 149 nucleotides Psyr_0726 and Psyr_0727 overlap by 4 nucleotides Psyr_0727 and Psyr_0728 are separated by 171 nucleotides
Psyr_0725: Psyr_0725 - competence lipoprotein ComL, putative, at 829,295 to 830,317
_0725
Psyr_0726: Psyr_0726 - ribosomal large subunit pseudouridine synthase D, at 830,467 to 831,429
_0726
Psyr_0727: Psyr_0727 - Protein of unknown function DUF152, at 831,426 to 832,154
_0727
Psyr_0728: Psyr_0728 - AAA ATPase, central region:Clp, N terminal:Clp, N terminal, at 832,326 to 834,890
_0728
Position (kb)
830
831
832 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 829.599 kb on + strand, within Psyr_0725 at 830.370 kb on - strand at 830.370 kb on - strand at 830.412 kb on - strand at 830.457 kb on + strand at 830.457 kb on + strand at 830.457 kb on + strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.458 kb on - strand at 830.479 kb on - strand at 830.479 kb on - strand at 830.480 kb on + strand at 830.481 kb on - strand at 830.481 kb on - strand at 830.481 kb on - strand at 830.546 kb on + strand at 830.546 kb on + strand at 830.547 kb on - strand at 830.726 kb on - strand, within Psyr_0726 at 830.970 kb on + strand, within Psyr_0726 at 830.970 kb on + strand, within Psyr_0726 at 830.971 kb on - strand, within Psyr_0726 at 830.971 kb on - strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.974 kb on + strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 830.975 kb on - strand, within Psyr_0726 at 831.134 kb on + strand, within Psyr_0726 at 831.134 kb on + strand, within Psyr_0726 at 831.135 kb on - strand, within Psyr_0726 at 831.135 kb on - strand, within Psyr_0726 at 831.135 kb on - strand, within Psyr_0726 at 831.176 kb on + strand, within Psyr_0726 at 831.442 kb on + strand at 831.442 kb on + strand at 831.442 kb on + strand at 831.442 kb on + strand at 831.442 kb on + strand at 831.638 kb on - strand, within Psyr_0727 at 831.638 kb on - strand, within Psyr_0727 at 831.646 kb on + strand, within Psyr_0727 at 831.646 kb on + strand, within Psyr_0727 at 831.646 kb on + strand, within Psyr_0727 at 831.647 kb on - strand, within Psyr_0727 at 831.647 kb on - strand, within Psyr_0727 at 831.718 kb on + strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 831.719 kb on - strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.002 kb on + strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.003 kb on - strand, within Psyr_0727 at 832.037 kb on + strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.038 kb on - strand, within Psyr_0727 at 832.182 kb on + strand at 832.182 kb on + strand at 832.183 kb on - strand at 832.212 kb on - strand at 832.212 kb on - strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.254 kb on + strand at 832.255 kb on - strand at 832.255 kb on - strand at 832.255 kb on - strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.282 kb on + strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.283 kb on - strand at 832.310 kb on + strand at 832.350 kb on - strand at 832.354 kb on + strand at 832.354 kb on + strand at 832.354 kb on + strand at 832.355 kb on - strand at 832.355 kb on - strand at 832.360 kb on + strand at 832.361 kb on - strand at 832.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 829,599 + Psyr_0725 0.30 -0.0 830,370 - +4.0 830,370 - +1.1 830,412 - -1.7 830,457 + -3.7 830,457 + -1.2 830,457 + -0.6 830,458 - +5.1 830,458 - +2.3 830,458 - +3.6 830,458 - +5.0 830,458 - +2.6 830,479 - +2.6 830,479 - +1.9 830,480 + +2.0 830,481 - +4.8 830,481 - +5.7 830,481 - +5.7 830,546 + +0.5 830,546 + -1.0 830,547 - +3.2 830,726 - Psyr_0726 0.27 +5.4 830,970 + Psyr_0726 0.52 -0.0 830,970 + Psyr_0726 0.52 +3.6 830,971 - Psyr_0726 0.52 +5.9 830,971 - Psyr_0726 0.52 +0.4 830,974 + Psyr_0726 0.53 +4.6 830,974 + Psyr_0726 0.53 -0.2 830,974 + Psyr_0726 0.53 +4.1 830,974 + Psyr_0726 0.53 +1.6 830,975 - Psyr_0726 0.53 +4.2 830,975 - Psyr_0726 0.53 +5.5 830,975 - Psyr_0726 0.53 +1.8 830,975 - Psyr_0726 0.53 +4.8 831,134 + Psyr_0726 0.69 +1.9 831,134 + Psyr_0726 0.69 +6.7 831,135 - Psyr_0726 0.69 +0.5 831,135 - Psyr_0726 0.69 +1.3 831,135 - Psyr_0726 0.69 +2.9 831,176 + Psyr_0726 0.74 +6.2 831,442 + -1.5 831,442 + -0.3 831,442 + -1.1 831,442 + -0.3 831,442 + -0.0 831,638 - Psyr_0727 0.29 -0.0 831,638 - Psyr_0727 0.29 -1.0 831,646 + Psyr_0727 0.30 +1.4 831,646 + Psyr_0727 0.30 -0.9 831,646 + Psyr_0727 0.30 +0.7 831,647 - Psyr_0727 0.30 +3.5 831,647 - Psyr_0727 0.30 -1.1 831,718 + Psyr_0727 0.40 +0.8 831,719 - Psyr_0727 0.40 +1.2 831,719 - Psyr_0727 0.40 +0.3 831,719 - Psyr_0727 0.40 -2.0 831,719 - Psyr_0727 0.40 -1.3 832,002 + Psyr_0727 0.79 -1.9 832,002 + Psyr_0727 0.79 -0.0 832,002 + Psyr_0727 0.79 -1.0 832,002 + Psyr_0727 0.79 +3.3 832,002 + Psyr_0727 0.79 -0.0 832,003 - Psyr_0727 0.79 +0.1 832,003 - Psyr_0727 0.79 +0.1 832,003 - Psyr_0727 0.79 -0.3 832,003 - Psyr_0727 0.79 +4.9 832,003 - Psyr_0727 0.79 +2.3 832,037 + Psyr_0727 0.84 -1.3 832,038 - Psyr_0727 0.84 -0.9 832,038 - Psyr_0727 0.84 +1.6 832,038 - Psyr_0727 0.84 +1.6 832,038 - Psyr_0727 0.84 -2.0 832,182 + -2.0 832,182 + -4.4 832,183 - -2.5 832,212 - +1.6 832,212 - -4.2 832,254 + +0.1 832,254 + +0.5 832,254 + +0.9 832,254 + -1.0 832,254 + -2.4 832,255 - +1.4 832,255 - -2.7 832,255 - +3.2 832,282 + -1.1 832,282 + -3.6 832,282 + -2.8 832,282 + -1.1 832,282 + -2.2 832,283 - -0.9 832,283 - -3.0 832,283 - +2.3 832,283 - -1.5 832,283 - -2.7 832,283 - +1.0 832,283 - -4.3 832,310 + -0.8 832,350 - +1.0 832,354 + -1.3 832,354 + -0.7 832,354 + -1.1 832,355 - +4.8 832,355 - +1.6 832,360 + -3.2 832,361 - -1.7 832,361 - +0.1
Or see this region's nucleotide sequence