Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0695 and Psyr_0696 are separated by 235 nucleotides Psyr_0696 and Psyr_0697 overlap by 1 nucleotides
Psyr_0695: Psyr_0695 - extracellular solute-binding protein, family 3, at 799,411 to 800,262
_0695
Psyr_0696: Psyr_0696 - selenophosphate synthase, at 800,498 to 801,532
_0696
Psyr_0697: Psyr_0697 - tRNA 2-selenouridine synthase, at 801,532 to 802,632
_0697
Position (kb) 800
801
802 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 799.595 kb on - strand, within Psyr_0695 at 799.616 kb on + strand, within Psyr_0695 at 799.617 kb on - strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.817 kb on + strand, within Psyr_0695 at 799.818 kb on - strand, within Psyr_0695 at 799.818 kb on - strand, within Psyr_0695 at 799.955 kb on - strand, within Psyr_0695 at 799.955 kb on - strand, within Psyr_0695 at 800.001 kb on + strand, within Psyr_0695 at 800.002 kb on - strand, within Psyr_0695 at 800.114 kb on + strand, within Psyr_0695 at 800.250 kb on + strand at 800.360 kb on + strand at 800.360 kb on + strand at 800.361 kb on - strand at 800.361 kb on - strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.362 kb on + strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.363 kb on - strand at 800.442 kb on + strand at 800.657 kb on + strand, within Psyr_0696 at 800.658 kb on - strand, within Psyr_0696 at 800.658 kb on - strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.771 kb on + strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 800.772 kb on - strand, within Psyr_0696 at 801.017 kb on + strand, within Psyr_0696 at 801.017 kb on + strand, within Psyr_0696 at 801.018 kb on - strand, within Psyr_0696 at 801.018 kb on - strand, within Psyr_0696 at 801.018 kb on - strand, within Psyr_0696 at 801.116 kb on - strand, within Psyr_0696 at 801.116 kb on - strand, within Psyr_0696 at 801.248 kb on + strand, within Psyr_0696 at 801.248 kb on + strand, within Psyr_0696 at 801.249 kb on - strand, within Psyr_0696 at 801.249 kb on - strand, within Psyr_0696 at 801.249 kb on - strand, within Psyr_0696 at 801.249 kb on - strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.284 kb on + strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.285 kb on - strand, within Psyr_0696 at 801.336 kb on - strand, within Psyr_0696 at 801.688 kb on + strand, within Psyr_0697 at 801.688 kb on + strand, within Psyr_0697 at 801.689 kb on - strand, within Psyr_0697 at 801.689 kb on - strand, within Psyr_0697 at 801.689 kb on - strand, within Psyr_0697 at 801.805 kb on + strand, within Psyr_0697 at 801.806 kb on - strand, within Psyr_0697 at 801.899 kb on - strand, within Psyr_0697 at 801.899 kb on - strand, within Psyr_0697 at 802.001 kb on + strand, within Psyr_0697 at 802.001 kb on + strand, within Psyr_0697 at 802.001 kb on + strand, within Psyr_0697 at 802.002 kb on - strand, within Psyr_0697 at 802.002 kb on - strand, within Psyr_0697 at 802.002 kb on - strand, within Psyr_0697 at 802.002 kb on - strand, within Psyr_0697 at 802.294 kb on + strand, within Psyr_0697 at 802.294 kb on + strand, within Psyr_0697 at 802.294 kb on + strand, within Psyr_0697 at 802.295 kb on - strand, within Psyr_0697 at 802.295 kb on - strand, within Psyr_0697 at 802.390 kb on - strand, within Psyr_0697 at 802.390 kb on - strand, within Psyr_0697 at 802.390 kb on - strand, within Psyr_0697 at 802.390 kb on - strand, within Psyr_0697 at 802.467 kb on + strand, within Psyr_0697 at 802.519 kb on + strand, within Psyr_0697 at 802.523 kb on - strand at 802.523 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 799,595 - Psyr_0695 0.22 -3.0 799,616 + Psyr_0695 0.24 -2.0 799,617 - Psyr_0695 0.24 -3.2 799,817 + Psyr_0695 0.48 +3.7 799,817 + Psyr_0695 0.48 -2.7 799,817 + Psyr_0695 0.48 +3.4 799,817 + Psyr_0695 0.48 -1.0 799,818 - Psyr_0695 0.48 -0.0 799,818 - Psyr_0695 0.48 -0.2 799,955 - Psyr_0695 0.64 +1.0 799,955 - Psyr_0695 0.64 -0.0 800,001 + Psyr_0695 0.69 +0.1 800,002 - Psyr_0695 0.69 -1.3 800,114 + Psyr_0695 0.83 -0.6 800,250 + -0.8 800,360 + +0.1 800,360 + -0.9 800,361 - +1.6 800,361 - -1.0 800,362 + +3.9 800,362 + +3.0 800,362 + -0.1 800,362 + +2.3 800,362 + +3.7 800,362 + -1.5 800,362 + -1.6 800,363 - -2.7 800,363 - -2.2 800,363 - -1.1 800,363 - -1.1 800,363 - +1.0 800,363 - +2.8 800,363 - -3.0 800,363 - +4.1 800,363 - -0.9 800,363 - -1.0 800,363 - -0.2 800,363 - +1.5 800,363 - -0.0 800,442 + +3.3 800,657 + Psyr_0696 0.15 -0.6 800,658 - Psyr_0696 0.15 -1.5 800,658 - Psyr_0696 0.15 +2.0 800,771 + Psyr_0696 0.26 +0.9 800,771 + Psyr_0696 0.26 +3.4 800,771 + Psyr_0696 0.26 -3.1 800,771 + Psyr_0696 0.26 -0.7 800,771 + Psyr_0696 0.26 +1.0 800,771 + Psyr_0696 0.26 -0.5 800,771 + Psyr_0696 0.26 +0.4 800,771 + Psyr_0696 0.26 +3.6 800,771 + Psyr_0696 0.26 +0.4 800,771 + Psyr_0696 0.26 -0.4 800,771 + Psyr_0696 0.26 -4.0 800,771 + Psyr_0696 0.26 +1.6 800,771 + Psyr_0696 0.26 +1.6 800,771 + Psyr_0696 0.26 +0.2 800,771 + Psyr_0696 0.26 +3.1 800,771 + Psyr_0696 0.26 -1.2 800,771 + Psyr_0696 0.26 -3.3 800,771 + Psyr_0696 0.26 -1.4 800,772 - Psyr_0696 0.26 +4.0 800,772 - Psyr_0696 0.26 +3.6 800,772 - Psyr_0696 0.26 -0.9 800,772 - Psyr_0696 0.26 +0.6 800,772 - Psyr_0696 0.26 +2.6 800,772 - Psyr_0696 0.26 -3.5 800,772 - Psyr_0696 0.26 -1.5 800,772 - Psyr_0696 0.26 +3.7 800,772 - Psyr_0696 0.26 -0.0 800,772 - Psyr_0696 0.26 +0.3 800,772 - Psyr_0696 0.26 -1.2 800,772 - Psyr_0696 0.26 +0.2 800,772 - Psyr_0696 0.26 +0.8 800,772 - Psyr_0696 0.26 -3.6 800,772 - Psyr_0696 0.26 +1.6 801,017 + Psyr_0696 0.50 -1.4 801,017 + Psyr_0696 0.50 +1.0 801,018 - Psyr_0696 0.50 +3.1 801,018 - Psyr_0696 0.50 +1.8 801,018 - Psyr_0696 0.50 +2.6 801,116 - Psyr_0696 0.60 +0.1 801,116 - Psyr_0696 0.60 -1.9 801,248 + Psyr_0696 0.72 +3.3 801,248 + Psyr_0696 0.72 +0.7 801,249 - Psyr_0696 0.73 -0.9 801,249 - Psyr_0696 0.73 -0.9 801,249 - Psyr_0696 0.73 +3.8 801,249 - Psyr_0696 0.73 +3.9 801,284 + Psyr_0696 0.76 -2.0 801,284 + +1.0 801,284 + Psyr_0696 0.76 -0.9 801,284 + Psyr_0696 0.76 -1.9 801,284 + Psyr_0696 0.76 +1.4 801,284 + Psyr_0696 0.76 +0.1 801,284 + Psyr_0696 0.76 -1.3 801,284 + Psyr_0696 0.76 -2.3 801,284 + Psyr_0696 0.76 +2.3 801,284 + Psyr_0696 0.76 +3.0 801,284 + Psyr_0696 0.76 -1.1 801,284 + Psyr_0696 0.76 +2.0 801,284 + Psyr_0696 0.76 +4.2 801,284 + Psyr_0696 0.76 +4.5 801,285 - Psyr_0696 0.76 +4.8 801,285 - Psyr_0696 0.76 -1.5 801,285 - Psyr_0696 0.76 +0.8 801,285 - Psyr_0696 0.76 -0.5 801,285 - Psyr_0696 0.76 -0.1 801,285 - Psyr_0696 0.76 +2.0 801,285 - Psyr_0696 0.76 -0.0 801,336 - Psyr_0696 0.81 +1.0 801,688 + Psyr_0697 0.14 +0.3 801,688 + Psyr_0697 0.14 +2.0 801,689 - Psyr_0697 0.14 +0.1 801,689 - Psyr_0697 0.14 -1.3 801,689 - Psyr_0697 0.14 -1.3 801,805 + Psyr_0697 0.25 -2.7 801,806 - Psyr_0697 0.25 -1.0 801,899 - Psyr_0697 0.33 -1.9 801,899 - Psyr_0697 0.33 -0.0 802,001 + Psyr_0697 0.43 +3.1 802,001 + Psyr_0697 0.43 -0.8 802,001 + Psyr_0697 0.43 -0.0 802,002 - Psyr_0697 0.43 +1.3 802,002 - Psyr_0697 0.43 +0.6 802,002 - Psyr_0697 0.43 -2.5 802,002 - Psyr_0697 0.43 -0.2 802,294 + Psyr_0697 0.69 -0.6 802,294 + Psyr_0697 0.69 -4.3 802,294 + Psyr_0697 0.69 +1.0 802,295 - Psyr_0697 0.69 -2.1 802,295 - Psyr_0697 0.69 -1.2 802,390 - Psyr_0697 0.78 -2.5 802,390 - Psyr_0697 0.78 +1.6 802,390 - Psyr_0697 0.78 -0.5 802,390 - Psyr_0697 0.78 -2.2 802,467 + Psyr_0697 0.85 +2.0 802,519 + Psyr_0697 0.90 +3.6 802,523 - -1.6 802,523 - +1.6
Or see this region's nucleotide sequence