Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0674

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
763,647	+		Psyr_0673	0.75	+3.1
763,652	+		Psyr_0673	0.75	+0.9
763,874	+		Psyr_0673	0.89	-1.7
763,874	+		Psyr_0673	0.89	+0.2
763,875	-		Psyr_0673	0.89	+2.3
763,875	-		Psyr_0673	0.89	-0.9
763,875	-		Psyr_0673	0.89	-0.2
763,875	-		Psyr_0673	0.89	-4.8
763,875	-		Psyr_0673	0.89	+0.5
763,999	-				-1.5
764,257	-				+2.0
764,332	+				+3.3
764,332	+				-1.8
764,332	+				-1.0
764,332	+				-0.6
764,332	+				-0.9
764,333	-				+2.0
764,361	-				+1.6
764,376	-				-0.4
764,391	+				-1.4
764,392	-				+2.0
764,401	+				-0.3
764,512	+				-0.0
764,533	+				-0.7
764,533	+				+3.0
764,533	+				+1.1
764,533	+				-1.3
764,534	-				+2.0
764,534	-				+1.6
764,534	-				+3.1
764,534	-				+2.6
764,534	-				+4.2
764,534	-				-2.1
764,550	+				-5.0
764,551	-				-0.4
764,551	-				-0.0
764,551	-				-1.6
764,551	-				-0.0
764,551	-				-3.8
764,551	-				+0.6
764,844	+		Psyr_0674	0.46	+1.7
764,845	-		Psyr_0674	0.46	-0.7
764,886	+		Psyr_0674	0.53	+4.8
765,158	-				+3.6
765,200	+				-1.6
765,200	+				+4.4
765,200	+				+4.1
765,200	+				-0.9
765,200	+				+1.6
765,201	-				-0.5
765,201	-				+2.0
765,201	-				+0.1
765,201	-				-1.6
765,201	-				-3.9
765,333	-		Psyr_0675	0.20	-0.7
765,353	-		Psyr_0675	0.23	-0.5
765,464	+		Psyr_0675	0.40	-0.8
765,464	+		Psyr_0675	0.40	-2.4
765,558	+		Psyr_0675	0.54	-1.4
765,558	+		Psyr_0675	0.54	-0.0
765,559	-		Psyr_0675	0.54	-0.8
765,560	+		Psyr_0675	0.54	-0.4
765,561	-		Psyr_0675	0.55	-1.0
765,561	-		Psyr_0675	0.55	+0.5
765,561	-		Psyr_0675	0.55	-2.9
765,653	+		Psyr_0675	0.68	+3.8
765,653	+		Psyr_0675	0.68	-2.7
765,653	+		Psyr_0675	0.68	-0.7
765,653	+		Psyr_0675	0.68	-2.6
765,654	-		Psyr_0675	0.69	+2.3
765,654	-		Psyr_0675	0.69	-2.8
765,654	-		Psyr_0675	0.69	-1.4
765,654	-		Psyr_0675	0.69	-0.4
765,667	-		Psyr_0675	0.71	-1.4
765,677	+		Psyr_0675	0.72	+3.1
765,677	+		Psyr_0675	0.72	+3.6
765,677	+		Psyr_0675	0.72	-0.8
765,677	+		Psyr_0675	0.72	-1.1
765,677	+		Psyr_0675	0.72	-3.0
765,677	+		Psyr_0675	0.72	+0.4
765,677	+		Psyr_0675	0.72	-1.8
765,677	+		Psyr_0675	0.72	-0.3
765,677	+		Psyr_0675	0.72	-1.5
765,677	+		Psyr_0675	0.72	+0.6
765,677	+		Psyr_0675	0.72	-1.5
765,677	+		Psyr_0675	0.72	+2.3
765,677	+		Psyr_0675	0.72	-1.2
765,678	-		Psyr_0675	0.72	+3.0
765,678	-		Psyr_0675	0.72	-4.7
765,678	-		Psyr_0675	0.72	-2.8
765,678	-		Psyr_0675	0.72	+4.1
765,678	-		Psyr_0675	0.72	+0.3
765,678	-		Psyr_0675	0.72	-1.6
765,678	-		Psyr_0675	0.72	+2.6
765,678	-		Psyr_0675	0.72	-2.2
765,678	-		Psyr_0675	0.72	+4.0
765,678	-		Psyr_0675	0.72	+1.6
765,680	+		Psyr_0675	0.73	+2.6
765,807	+				+2.3
765,807	+				-2.0
765,883	-				+3.0
765,904	+				+3.6