Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0660 and Psyr_0661 are separated by 159 nucleotides Psyr_0661 and Psyr_0662 are separated by 78 nucleotides
Psyr_0660: Psyr_0660 - transcriptional regulator, ArsR family, at 748,513 to 749,205
_0660
Psyr_0661: Psyr_0661 - adenosine deaminase, at 749,365 to 750,318
_0661
Psyr_0662: Psyr_0662 - 2OG-Fe(II) oxygenase superfamily, at 750,397 to 751,362
_0662
Position (kb) 749
750
751 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 748.367 kb on + strand at 748.368 kb on - strand at 748.404 kb on - strand at 748.404 kb on - strand at 748.410 kb on + strand at 748.412 kb on + strand at 748.412 kb on + strand at 748.412 kb on + strand at 748.413 kb on - strand at 748.413 kb on - strand at 748.413 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.423 kb on - strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.426 kb on + strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.427 kb on - strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.428 kb on + strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.429 kb on - strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.483 kb on + strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.484 kb on - strand at 748.599 kb on + strand, within Psyr_0660 at 748.599 kb on + strand, within Psyr_0660 at 748.599 kb on + strand, within Psyr_0660 at 748.600 kb on - strand, within Psyr_0660 at 748.792 kb on - strand, within Psyr_0660 at 748.926 kb on - strand, within Psyr_0660 at 748.926 kb on - strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.993 kb on + strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.994 kb on - strand, within Psyr_0660 at 748.997 kb on + strand, within Psyr_0660 at 749.257 kb on + strand at 749.367 kb on - strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.444 kb on + strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.445 kb on - strand at 749.472 kb on - strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.711 kb on + strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 749.712 kb on - strand, within Psyr_0661 at 750.077 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.095 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.118 kb on + strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.119 kb on - strand, within Psyr_0661 at 750.134 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.137 kb on + strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.138 kb on - strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.173 kb on + strand, within Psyr_0661 at 750.174 kb on - strand, within Psyr_0661 at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.314 kb on + strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.315 kb on - strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.318 kb on + strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.319 kb on - strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.354 kb on + strand at 750.355 kb on - strand at 750.355 kb on - strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.428 kb on + strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.429 kb on - strand at 750.433 kb on - strand at 750.433 kb on - strand at 750.740 kb on + strand, within Psyr_0662 at 750.839 kb on - strand, within Psyr_0662 at 750.839 kb on - strand, within Psyr_0662 at 750.944 kb on + strand, within Psyr_0662 at 750.944 kb on + strand, within Psyr_0662 at 750.945 kb on - strand, within Psyr_0662 at 750.945 kb on - strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.250 kb on + strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662 at 751.251 kb on - strand, within Psyr_0662
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 748,367 + -1.9 748,368 - -0.3 748,404 - +1.6 748,404 - -1.6 748,410 + -0.2 748,412 + -1.4 748,412 + +3.1 748,412 + +4.0 748,413 - +0.1 748,413 - -0.4 748,413 - +3.1 748,423 - -1.8 748,423 - -0.0 748,423 - -0.4 748,423 - +2.3 748,426 + +4.0 748,426 + +1.3 748,426 + +3.1 748,426 + -0.7 748,426 + -1.6 748,426 + -2.5 748,426 + +3.0 748,426 + +0.3 748,426 + -0.9 748,427 - +0.7 748,427 - -0.3 748,427 - +3.8 748,427 - +4.2 748,427 - -1.3 748,428 + -0.7 748,428 + +3.8 748,428 + -2.0 748,428 + +2.3 748,428 + +2.2 748,429 - +1.0 748,429 - -2.0 748,429 - -2.1 748,429 - +3.6 748,429 - -2.0 748,429 - -0.8 748,483 + +1.4 748,483 + -0.7 748,483 + +0.6 748,483 + -1.7 748,483 + -2.5 748,484 - +3.0 748,484 - -0.6 748,484 - -2.3 748,484 - -3.5 748,484 - +3.3 748,484 - -2.3 748,484 - -1.1 748,484 - +0.2 748,599 + Psyr_0660 0.12 -0.2 748,599 + Psyr_0660 0.12 +2.0 748,599 + Psyr_0660 0.12 +1.3 748,600 - Psyr_0660 0.13 -0.0 748,792 - Psyr_0660 0.40 +0.7 748,926 - Psyr_0660 0.60 +3.1 748,926 - Psyr_0660 0.60 -0.4 748,993 + Psyr_0660 0.69 -5.3 748,993 + Psyr_0660 0.69 -0.3 748,993 + Psyr_0660 0.69 +4.9 748,993 + Psyr_0660 0.69 -1.3 748,993 + Psyr_0660 0.69 +2.3 748,993 + Psyr_0660 0.69 -1.2 748,993 + Psyr_0660 0.69 +0.6 748,993 + Psyr_0660 0.69 +1.0 748,993 + Psyr_0660 0.69 +4.7 748,993 + Psyr_0660 0.69 +3.0 748,993 + Psyr_0660 0.69 -0.2 748,993 + Psyr_0660 0.69 +1.0 748,993 + Psyr_0660 0.69 +0.9 748,993 + Psyr_0660 0.69 -0.0 748,993 + Psyr_0660 0.69 -0.4 748,993 + Psyr_0660 0.69 -0.1 748,993 + Psyr_0660 0.69 +3.1 748,993 + Psyr_0660 0.69 -0.0 748,993 + Psyr_0660 0.69 +0.1 748,993 + Psyr_0660 0.69 -0.6 748,993 + Psyr_0660 0.69 +2.6 748,993 + Psyr_0660 0.69 -1.0 748,993 + Psyr_0660 0.69 -0.0 748,994 - Psyr_0660 0.69 -1.0 748,994 - Psyr_0660 0.69 -0.6 748,994 - Psyr_0660 0.69 -4.5 748,994 - Psyr_0660 0.69 +3.8 748,994 - Psyr_0660 0.69 +2.8 748,994 - Psyr_0660 0.69 +1.0 748,994 - Psyr_0660 0.69 -3.8 748,994 - Psyr_0660 0.69 -3.2 748,994 - Psyr_0660 0.69 -3.7 748,994 - -3.2 748,994 - Psyr_0660 0.69 +1.0 748,994 - Psyr_0660 0.69 -1.9 748,994 - Psyr_0660 0.69 +0.3 748,994 - Psyr_0660 0.69 -1.2 748,994 - Psyr_0660 0.69 -1.6 748,994 - Psyr_0660 0.69 -2.3 748,994 - Psyr_0660 0.69 -1.0 748,994 - Psyr_0660 0.69 +1.0 748,994 - Psyr_0660 0.69 -2.2 748,994 - Psyr_0660 0.69 -0.0 748,994 - Psyr_0660 0.69 -4.7 748,994 - Psyr_0660 0.69 +2.8 748,994 - Psyr_0660 0.69 +3.4 748,994 - Psyr_0660 0.69 -1.9 748,994 - Psyr_0660 0.69 +2.6 748,997 + Psyr_0660 0.70 +4.0 749,257 + +2.8 749,367 - -0.8 749,444 + -0.0 749,444 + +0.1 749,444 + -4.6 749,445 - -2.5 749,445 - -0.3 749,445 - -2.6 749,445 - +3.6 749,472 - Psyr_0661 0.11 +0.7 749,711 + Psyr_0661 0.36 +2.6 749,711 + Psyr_0661 0.36 +2.0 749,712 - Psyr_0661 0.36 -1.4 749,712 - Psyr_0661 0.36 -2.6 749,712 - Psyr_0661 0.36 +3.0 750,077 + Psyr_0661 0.75 -0.9 750,095 + Psyr_0661 0.77 -0.0 750,095 + Psyr_0661 0.77 -2.6 750,118 + Psyr_0661 0.79 +2.0 750,118 + Psyr_0661 0.79 +0.2 750,118 + Psyr_0661 0.79 +3.6 750,118 + Psyr_0661 0.79 -2.1 750,119 - Psyr_0661 0.79 +1.6 750,119 - Psyr_0661 0.79 -1.6 750,119 - Psyr_0661 0.79 -0.9 750,119 - Psyr_0661 0.79 -1.3 750,134 + Psyr_0661 0.81 -3.3 750,137 + Psyr_0661 0.81 -3.6 750,137 + Psyr_0661 0.81 -0.4 750,137 + Psyr_0661 0.81 +3.8 750,138 - Psyr_0661 0.81 -1.2 750,138 - Psyr_0661 0.81 +0.3 750,138 - Psyr_0661 0.81 -1.6 750,173 + Psyr_0661 0.85 -3.2 750,173 + Psyr_0661 0.85 -2.7 750,173 + Psyr_0661 0.85 -0.7 750,173 + Psyr_0661 0.85 -0.0 750,173 + Psyr_0661 0.85 +4.3 750,173 + Psyr_0661 0.85 +1.6 750,174 - Psyr_0661 0.85 +3.1 750,314 + -2.1 750,314 + -0.0 750,314 + -4.2 750,314 + -2.8 750,314 + -0.8 750,314 + -0.6 750,314 + -0.0 750,314 + +2.2 750,314 + +3.3 750,315 - -0.0 750,315 - -0.0 750,315 - -0.0 750,315 - -1.2 750,315 - -0.5 750,315 - +0.2 750,315 - +2.0 750,315 - -1.9 750,315 - -2.4 750,318 + -2.0 750,318 + -1.3 750,318 + -1.3 750,318 + -2.3 750,318 + -0.0 750,318 + +1.0 750,318 + -2.2 750,319 - +3.6 750,319 - -0.6 750,319 - -3.3 750,319 - +1.0 750,354 + -1.7 750,354 + -1.1 750,354 + +1.8 750,354 + -0.0 750,355 - -0.2 750,355 - -1.3 750,428 + -2.8 750,428 + -1.2 750,428 + +1.0 750,428 + -2.1 750,429 - +3.0 750,429 - +4.1 750,429 - -1.8 750,429 - +1.0 750,429 - +1.0 750,433 - +1.6 750,433 - +2.0 750,740 + Psyr_0662 0.36 +3.0 750,839 - Psyr_0662 0.46 -0.4 750,839 - Psyr_0662 0.46 +3.1 750,944 + Psyr_0662 0.57 -1.5 750,944 + Psyr_0662 0.57 -2.0 750,945 - Psyr_0662 0.57 -0.6 750,945 - Psyr_0662 0.57 +1.0 751,250 + Psyr_0662 0.88 -1.2 751,250 + Psyr_0662 0.88 +2.8 751,250 + Psyr_0662 0.88 -3.2 751,250 + Psyr_0662 0.88 -3.8 751,251 - Psyr_0662 0.88 +2.3 751,251 - Psyr_0662 0.88 -0.6 751,251 - Psyr_0662 0.88 -1.9 751,251 - Psyr_0662 0.88 -0.4 751,251 - Psyr_0662 0.88 -3.0 751,251 - Psyr_0662 0.88 -2.2
Or see this region's nucleotide sequence