Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0612 and Psyr_0613 are separated by 1 nucleotides Psyr_0613 and Psyr_0614 are separated by 7 nucleotides Psyr_0614 and Psyr_0615 are separated by 5 nucleotides Psyr_0615 and Psyr_0616 overlap by 4 nucleotides
Psyr_0612: Psyr_0612 - Nucleotidyl transferase, at 702,078 to 702,839
_0612
Psyr_0613: Psyr_0613 - conserved hypothetical protein, at 702,841 to 703,455
_0613
Psyr_0614: Psyr_0614 - HAD-superfamily hydrolase, subfamily IA, variant 3, at 703,463 to 704,101
_0614
Psyr_0615: Psyr_0615 - conserved hypothetical protein, at 704,107 to 704,829
_0615
Psyr_0616: Psyr_0616 - conserved domain protein, at 704,826 to 705,146
_0616
Position (kb) 703
704
705 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 702.563 kb on + strand, within Psyr_0612 at 702.563 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.591 kb on + strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.592 kb on - strand, within Psyr_0612 at 702.594 kb on - strand, within Psyr_0612 at 702.594 kb on - strand, within Psyr_0612 at 702.672 kb on + strand, within Psyr_0612 at 702.672 kb on + strand, within Psyr_0612 at 702.673 kb on - strand, within Psyr_0612 at 702.673 kb on - strand, within Psyr_0612 at 702.673 kb on - strand, within Psyr_0612 at 702.687 kb on + strand, within Psyr_0612 at 702.688 kb on - strand, within Psyr_0612 at 702.688 kb on - strand, within Psyr_0612 at 702.726 kb on + strand, within Psyr_0612 at 702.727 kb on - strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.756 kb on + strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.757 kb on - strand, within Psyr_0612 at 702.888 kb on + strand at 702.888 kb on + strand at 702.888 kb on + strand at 702.889 kb on - strand at 703.120 kb on - strand, within Psyr_0613 at 703.189 kb on + strand, within Psyr_0613 at 703.189 kb on + strand, within Psyr_0613 at 703.189 kb on + strand, within Psyr_0613 at 703.189 kb on + strand, within Psyr_0613 at 703.189 kb on + strand, within Psyr_0613 at 703.189 kb on + strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.190 kb on - strand, within Psyr_0613 at 703.416 kb on + strand at 703.417 kb on - strand at 703.523 kb on + strand at 703.523 kb on + strand at 703.523 kb on + strand at 703.524 kb on - strand at 703.691 kb on + strand, within Psyr_0614 at 703.692 kb on - strand, within Psyr_0614 at 703.692 kb on - strand, within Psyr_0614 at 703.742 kb on + strand, within Psyr_0614 at 703.772 kb on + strand, within Psyr_0614 at 703.847 kb on + strand, within Psyr_0614 at 703.847 kb on + strand, within Psyr_0614 at 703.847 kb on + strand, within Psyr_0614 at 703.848 kb on - strand, within Psyr_0614 at 703.848 kb on - strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.907 kb on + strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.908 kb on - strand, within Psyr_0614 at 703.909 kb on + strand, within Psyr_0614 at 704.037 kb on + strand, within Psyr_0614 at 704.038 kb on - strand at 704.038 kb on - strand at 704.038 kb on - strand at 704.112 kb on + strand at 704.112 kb on + strand at 704.173 kb on + strand at 704.174 kb on - strand at 704.185 kb on + strand, within Psyr_0615 at 704.185 kb on + strand, within Psyr_0615 at 704.185 kb on + strand, within Psyr_0615 at 704.186 kb on - strand, within Psyr_0615 at 704.208 kb on + strand, within Psyr_0615 at 704.208 kb on + strand, within Psyr_0615 at 704.208 kb on + strand, within Psyr_0615 at 704.208 kb on + strand, within Psyr_0615 at 704.209 kb on - strand, within Psyr_0615 at 704.209 kb on - strand, within Psyr_0615 at 704.216 kb on + strand, within Psyr_0615 at 704.217 kb on - strand, within Psyr_0615 at 704.231 kb on + strand, within Psyr_0615 at 704.333 kb on + strand, within Psyr_0615 at 704.333 kb on + strand, within Psyr_0615 at 704.334 kb on - strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.459 kb on + strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.460 kb on - strand, within Psyr_0615 at 704.614 kb on + strand, within Psyr_0615 at 704.614 kb on + strand, within Psyr_0615 at 704.614 kb on + strand, within Psyr_0615 at 704.615 kb on - strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.695 kb on + strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.696 kb on - strand, within Psyr_0615 at 704.699 kb on + strand, within Psyr_0615 at 704.699 kb on + strand, within Psyr_0615 at 704.699 kb on + strand, within Psyr_0615 at 704.699 kb on + strand, within Psyr_0615 at 704.699 kb on + strand, within Psyr_0615 at 704.928 kb on + strand, within Psyr_0616 at 704.928 kb on + strand, within Psyr_0616 at 704.929 kb on - strand, within Psyr_0616 at 704.929 kb on - strand, within Psyr_0616 at 704.929 kb on - strand, within Psyr_0616
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 702,563 + Psyr_0612 0.64 +3.5 702,563 + Psyr_0612 0.64 -0.6 702,591 + Psyr_0612 0.67 -1.7 702,591 + Psyr_0612 0.67 +1.5 702,591 + Psyr_0612 0.67 +1.4 702,591 + Psyr_0612 0.67 -1.5 702,591 + Psyr_0612 0.67 -1.7 702,591 + Psyr_0612 0.67 -2.2 702,591 + Psyr_0612 0.67 +3.4 702,592 - Psyr_0612 0.67 +1.5 702,592 - Psyr_0612 0.67 -4.2 702,592 - Psyr_0612 0.67 -0.6 702,592 - Psyr_0612 0.67 -2.0 702,592 - Psyr_0612 0.67 +1.5 702,592 - Psyr_0612 0.67 -0.0 702,592 - Psyr_0612 0.67 -4.0 702,594 - Psyr_0612 0.68 -1.9 702,594 - Psyr_0612 0.68 -0.9 702,672 + Psyr_0612 0.78 +3.4 702,672 + Psyr_0612 0.78 -0.0 702,673 - Psyr_0612 0.78 +3.5 702,673 - Psyr_0612 0.78 -1.5 702,673 - Psyr_0612 0.78 +2.5 702,687 + Psyr_0612 0.80 -0.2 702,688 - Psyr_0612 0.80 -1.5 702,688 - Psyr_0612 0.80 -4.7 702,726 + Psyr_0612 0.85 -1.4 702,727 - Psyr_0612 0.85 -3.7 702,756 + Psyr_0612 0.89 -0.7 702,756 + Psyr_0612 0.89 +2.8 702,756 + Psyr_0612 0.89 +1.5 702,756 + Psyr_0612 0.89 +3.5 702,756 + Psyr_0612 0.89 +2.5 702,756 + Psyr_0612 0.89 -3.8 702,756 + Psyr_0612 0.89 -2.0 702,757 - Psyr_0612 0.89 +2.3 702,757 - Psyr_0612 0.89 +2.8 702,757 - Psyr_0612 0.89 +0.1 702,757 - Psyr_0612 0.89 -0.5 702,757 - Psyr_0612 0.89 -1.4 702,757 - Psyr_0612 0.89 +1.3 702,757 - Psyr_0612 0.89 -0.0 702,757 - Psyr_0612 0.89 -0.6 702,757 - Psyr_0612 0.89 +3.1 702,757 - Psyr_0612 0.89 -1.6 702,757 - Psyr_0612 0.89 -0.0 702,888 + -1.8 702,888 + +1.5 702,888 + -0.2 702,889 - -1.4 703,120 - Psyr_0613 0.45 -3.0 703,189 + Psyr_0613 0.57 -1.4 703,189 + Psyr_0613 0.57 -1.0 703,189 + Psyr_0613 0.57 +3.5 703,189 + Psyr_0613 0.57 +0.5 703,189 + Psyr_0613 0.57 +2.2 703,189 + Psyr_0613 0.57 -4.1 703,190 - Psyr_0613 0.57 +1.2 703,190 - Psyr_0613 0.57 +0.5 703,190 - Psyr_0613 0.57 -1.1 703,190 - Psyr_0613 0.57 -0.6 703,190 - Psyr_0613 0.57 +0.6 703,190 - Psyr_0613 0.57 +2.5 703,190 - Psyr_0613 0.57 -1.1 703,416 + +1.5 703,417 - -2.1 703,523 + -3.7 703,523 + -0.0 703,523 + -0.0 703,524 - -2.7 703,691 + Psyr_0614 0.36 -2.6 703,692 - Psyr_0614 0.36 +1.0 703,692 - Psyr_0614 0.36 -1.8 703,742 + Psyr_0614 0.44 -4.2 703,772 + Psyr_0614 0.48 -0.2 703,847 + Psyr_0614 0.60 -2.2 703,847 + Psyr_0614 0.60 -3.1 703,847 + Psyr_0614 0.60 +2.3 703,848 - Psyr_0614 0.60 +3.9 703,848 - Psyr_0614 0.60 -2.7 703,907 + Psyr_0614 0.69 -0.0 703,907 + Psyr_0614 0.69 +0.4 703,907 + Psyr_0614 0.69 +3.5 703,907 + Psyr_0614 0.69 -3.2 703,907 + Psyr_0614 0.69 -1.8 703,907 + Psyr_0614 0.69 +2.8 703,907 + Psyr_0614 0.69 -1.3 703,907 + Psyr_0614 0.69 +3.0 703,907 + Psyr_0614 0.69 -1.8 703,907 + Psyr_0614 0.69 -0.6 703,907 + Psyr_0614 0.69 -1.2 703,907 + Psyr_0614 0.69 -0.9 703,907 + Psyr_0614 0.69 -1.9 703,907 + Psyr_0614 0.69 -1.6 703,907 + Psyr_0614 0.69 +1.2 703,908 - Psyr_0614 0.70 +1.5 703,908 - Psyr_0614 0.70 +3.4 703,908 - Psyr_0614 0.70 +0.3 703,908 - Psyr_0614 0.70 +3.5 703,908 - Psyr_0614 0.70 -1.7 703,908 - Psyr_0614 0.70 +2.3 703,908 - Psyr_0614 0.70 +1.5 703,908 - Psyr_0614 0.70 -1.0 703,908 - Psyr_0614 0.70 +3.4 703,908 - Psyr_0614 0.70 -2.3 703,908 - Psyr_0614 0.70 -1.9 703,908 - Psyr_0614 0.70 +0.1 703,908 - Psyr_0614 0.70 -0.5 703,908 - Psyr_0614 0.70 +2.0 703,908 - Psyr_0614 0.70 -2.8 703,909 + Psyr_0614 0.70 +0.5 704,037 + Psyr_0614 0.90 -1.0 704,038 - -1.3 704,038 - -3.0 704,038 - -2.8 704,112 + -0.6 704,112 + -1.3 704,173 + +2.5 704,174 - -1.6 704,185 + Psyr_0615 0.11 -0.3 704,185 + Psyr_0615 0.11 +1.0 704,185 + Psyr_0615 0.11 -1.8 704,186 - Psyr_0615 0.11 -0.8 704,208 + Psyr_0615 0.14 -2.8 704,208 + Psyr_0615 0.14 +3.1 704,208 + Psyr_0615 0.14 -1.3 704,208 + Psyr_0615 0.14 -1.5 704,209 - Psyr_0615 0.14 -2.5 704,209 - Psyr_0615 0.14 -1.9 704,216 + Psyr_0615 0.15 -0.8 704,217 - Psyr_0615 0.15 -1.7 704,231 + Psyr_0615 0.17 -3.4 704,333 + Psyr_0615 0.31 -0.0 704,333 + Psyr_0615 0.31 -1.5 704,334 - Psyr_0615 0.31 +3.5 704,459 + Psyr_0615 0.49 -2.8 704,459 + Psyr_0615 0.49 +1.5 704,459 + Psyr_0615 0.49 -1.7 704,459 + Psyr_0615 0.49 -0.2 704,459 + Psyr_0615 0.49 +1.1 704,459 + Psyr_0615 0.49 +2.8 704,459 + Psyr_0615 0.49 +0.5 704,459 + Psyr_0615 0.49 -1.6 704,459 + Psyr_0615 0.49 -2.2 704,460 - Psyr_0615 0.49 -0.3 704,460 - Psyr_0615 0.49 -0.1 704,460 - Psyr_0615 0.49 -1.5 704,460 - Psyr_0615 0.49 -0.7 704,460 - Psyr_0615 0.49 +0.2 704,460 - Psyr_0615 0.49 +5.0 704,460 - Psyr_0615 0.49 +0.4 704,614 + Psyr_0615 0.70 -2.0 704,614 + Psyr_0615 0.70 -0.7 704,614 + Psyr_0615 0.70 +3.8 704,615 - Psyr_0615 0.70 +0.1 704,695 + Psyr_0615 0.81 -0.2 704,695 + Psyr_0615 0.81 -4.2 704,695 + Psyr_0615 0.81 -3.5 704,695 + Psyr_0615 0.81 +2.3 704,695 + Psyr_0615 0.81 +0.6 704,695 + Psyr_0615 0.81 -0.0 704,695 + Psyr_0615 0.81 -1.5 704,695 + Psyr_0615 0.81 -1.1 704,695 + Psyr_0615 0.81 +0.2 704,695 + Psyr_0615 0.81 -1.8 704,695 + Psyr_0615 0.81 -1.8 704,695 + Psyr_0615 0.81 +2.5 704,696 - Psyr_0615 0.81 -2.7 704,696 - Psyr_0615 0.81 -1.8 704,696 - Psyr_0615 0.81 +3.9 704,696 - Psyr_0615 0.81 +0.4 704,696 - Psyr_0615 0.81 -2.0 704,696 - Psyr_0615 0.81 -2.4 704,696 - Psyr_0615 0.81 -1.4 704,696 - Psyr_0615 0.81 -0.0 704,696 - Psyr_0615 0.81 -2.9 704,696 - Psyr_0615 0.81 -2.7 704,696 - Psyr_0615 0.81 -2.2 704,696 - Psyr_0615 0.81 +1.3 704,696 - Psyr_0615 0.81 -3.5 704,696 - Psyr_0615 0.81 +0.1 704,699 + Psyr_0615 0.82 +3.3 704,699 + Psyr_0615 0.82 -0.8 704,699 + Psyr_0615 0.82 -0.2 704,699 + Psyr_0615 0.82 +3.1 704,699 + Psyr_0615 0.82 -0.0 704,928 + Psyr_0616 0.32 +1.5 704,928 + Psyr_0616 0.32 -2.5 704,929 - Psyr_0616 0.32 -2.8 704,929 - Psyr_0616 0.32 +2.3 704,929 - Psyr_0616 0.32 -1.1
Or see this region's nucleotide sequence