Experiment: KB with Mitomycin C 0.625 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0511 and Psyr_0512 are separated by 7 nucleotides Psyr_0512 and Psyr_0513 are separated by 226 nucleotides Psyr_0513 and Psyr_0514 overlap by 38 nucleotides
Psyr_0511: Psyr_0511 - conserved hypothetical protein, at 567,369 to 567,665
_0511
Psyr_0512: Psyr_0512 - GCN5-related N-acetyltransferase, at 567,673 to 568,131
_0512
Psyr_0513: Psyr_0513 - amino acid ABC transporter substrate-binding protein, PAAT family, at 568,358 to 569,113
_0513
Psyr_0514: Psyr_0514 - Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK, at 569,076 to 571,274
_0514
Position (kb) 568
569
570 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 567.399 kb on + strand, within Psyr_0511 at 567.411 kb on + strand, within Psyr_0511 at 567.411 kb on + strand, within Psyr_0511 at 567.411 kb on + strand, within Psyr_0511 at 567.412 kb on - strand, within Psyr_0511 at 567.420 kb on + strand, within Psyr_0511 at 567.421 kb on - strand, within Psyr_0511 at 567.503 kb on + strand, within Psyr_0511 at 567.504 kb on - strand, within Psyr_0511 at 567.658 kb on - strand at 567.758 kb on + strand, within Psyr_0512 at 567.761 kb on + strand, within Psyr_0512 at 567.761 kb on + strand, within Psyr_0512 at 567.762 kb on - strand, within Psyr_0512 at 567.787 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.791 kb on + strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 567.792 kb on - strand, within Psyr_0512 at 568.022 kb on + strand, within Psyr_0512 at 568.023 kb on - strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.076 kb on + strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.077 kb on - strand, within Psyr_0512 at 568.166 kb on + strand at 568.166 kb on + strand at 568.167 kb on - strand at 568.172 kb on + strand at 568.252 kb on - strand at 568.252 kb on - strand at 568.252 kb on - strand at 568.275 kb on + strand at 568.275 kb on + strand at 568.276 kb on - strand at 568.276 kb on - strand at 568.276 kb on - strand at 568.322 kb on + strand at 568.322 kb on + strand at 568.322 kb on + strand at 568.323 kb on - strand at 568.323 kb on - strand at 568.323 kb on - strand at 568.544 kb on + strand, within Psyr_0513 at 568.545 kb on - strand, within Psyr_0513 at 568.545 kb on - strand, within Psyr_0513 at 568.545 kb on - strand, within Psyr_0513 at 568.634 kb on - strand, within Psyr_0513 at 568.634 kb on - strand, within Psyr_0513 at 568.661 kb on + strand, within Psyr_0513 at 568.662 kb on - strand, within Psyr_0513 at 568.662 kb on - strand, within Psyr_0513 at 568.739 kb on + strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.740 kb on - strand, within Psyr_0513 at 568.769 kb on + strand, within Psyr_0513 at 568.769 kb on + strand, within Psyr_0513 at 568.770 kb on - strand, within Psyr_0513 at 568.770 kb on - strand, within Psyr_0513 at 568.770 kb on - strand, within Psyr_0513 at 568.836 kb on + strand, within Psyr_0513 at 568.837 kb on - strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.883 kb on + strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.884 kb on - strand, within Psyr_0513 at 568.887 kb on + strand, within Psyr_0513 at 568.887 kb on + strand, within Psyr_0513 at 568.888 kb on - strand, within Psyr_0513 at 568.888 kb on - strand, within Psyr_0513 at 568.888 kb on - strand, within Psyr_0513 at 568.895 kb on + strand, within Psyr_0513 at 568.944 kb on + strand, within Psyr_0513 at 568.976 kb on - strand, within Psyr_0513 at 569.045 kb on - strand at 569.063 kb on + strand at 569.064 kb on - strand at 569.064 kb on - strand at 569.064 kb on - strand at 569.369 kb on + strand, within Psyr_0514 at 569.398 kb on + strand, within Psyr_0514 at 569.398 kb on + strand, within Psyr_0514 at 569.398 kb on + strand, within Psyr_0514 at 569.399 kb on - strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.596 kb on + strand, within Psyr_0514 at 569.597 kb on - strand, within Psyr_0514 at 569.597 kb on - strand, within Psyr_0514 at 569.708 kb on + strand, within Psyr_0514 at 569.709 kb on - strand, within Psyr_0514 at 569.709 kb on - strand, within Psyr_0514 at 569.709 kb on - strand, within Psyr_0514 at 569.803 kb on + strand, within Psyr_0514 at 569.876 kb on + strand, within Psyr_0514
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.625 ug/ml remove 567,399 + Psyr_0511 0.10 -2.3 567,411 + Psyr_0511 0.14 -0.9 567,411 + Psyr_0511 0.14 -3.0 567,411 + Psyr_0511 0.14 -1.3 567,412 - Psyr_0511 0.14 -1.1 567,420 + Psyr_0511 0.17 +1.9 567,421 - Psyr_0511 0.18 -0.2 567,503 + Psyr_0511 0.45 +3.1 567,504 - Psyr_0511 0.45 -0.9 567,658 - -2.0 567,758 + Psyr_0512 0.19 +1.9 567,761 + Psyr_0512 0.19 +1.9 567,761 + Psyr_0512 0.19 +1.3 567,762 - Psyr_0512 0.19 +3.3 567,787 + Psyr_0512 0.25 +2.5 567,791 + Psyr_0512 0.26 +0.3 567,791 + Psyr_0512 0.26 -2.7 567,791 + Psyr_0512 0.26 -3.1 567,791 + Psyr_0512 0.26 -1.2 567,791 + Psyr_0512 0.26 -0.5 567,791 + Psyr_0512 0.26 -0.4 567,791 + Psyr_0512 0.26 -2.0 567,791 + Psyr_0512 0.26 -3.2 567,791 + Psyr_0512 0.26 -3.9 567,791 + Psyr_0512 0.26 -3.2 567,791 + Psyr_0512 0.26 +1.6 567,792 - Psyr_0512 0.26 -1.9 567,792 - Psyr_0512 0.26 -2.8 567,792 - Psyr_0512 0.26 +0.9 567,792 - Psyr_0512 0.26 -0.2 567,792 - Psyr_0512 0.26 -0.9 567,792 - Psyr_0512 0.26 -3.8 567,792 - Psyr_0512 0.26 -0.2 567,792 - Psyr_0512 0.26 +1.5 568,022 + Psyr_0512 0.76 -0.7 568,023 - Psyr_0512 0.76 +3.9 568,076 + Psyr_0512 0.88 -2.5 568,076 + Psyr_0512 0.88 -1.4 568,076 + Psyr_0512 0.88 -0.6 568,076 + Psyr_0512 0.88 +1.2 568,076 + Psyr_0512 0.88 -0.8 568,077 - Psyr_0512 0.88 -3.2 568,077 - Psyr_0512 0.88 -1.3 568,077 - Psyr_0512 0.88 -0.9 568,166 + -3.2 568,166 + +0.7 568,167 - +1.5 568,172 + -4.8 568,252 - -0.1 568,252 - +0.7 568,252 - +3.4 568,275 + -2.4 568,275 + +0.2 568,276 - -1.1 568,276 - +2.3 568,276 - -1.0 568,322 + +3.9 568,322 + +4.0 568,322 + +4.0 568,323 - +2.5 568,323 - -2.4 568,323 - +1.5 568,544 + Psyr_0513 0.25 -2.4 568,545 - Psyr_0513 0.25 -0.8 568,545 - Psyr_0513 0.25 -1.6 568,545 - Psyr_0513 0.25 +0.9 568,634 - Psyr_0513 0.37 -0.1 568,634 - Psyr_0513 0.37 -0.1 568,661 + Psyr_0513 0.40 +3.1 568,662 - Psyr_0513 0.40 -4.6 568,662 - Psyr_0513 0.40 +0.0 568,739 + Psyr_0513 0.50 +0.0 568,740 - Psyr_0513 0.51 -0.1 568,740 - Psyr_0513 0.51 +0.3 568,740 - Psyr_0513 0.51 -2.1 568,740 - Psyr_0513 0.51 +0.3 568,740 - Psyr_0513 0.51 +0.2 568,769 + Psyr_0513 0.54 +2.3 568,769 + Psyr_0513 0.54 -1.3 568,770 - Psyr_0513 0.54 +4.5 568,770 - Psyr_0513 0.54 -1.9 568,770 - Psyr_0513 0.54 -0.0 568,836 + Psyr_0513 0.63 -0.7 568,837 - Psyr_0513 0.63 -2.2 568,883 + Psyr_0513 0.69 +2.7 568,883 + Psyr_0513 0.69 -1.4 568,883 + Psyr_0513 0.69 -1.1 568,883 + Psyr_0513 0.69 -1.1 568,883 + Psyr_0513 0.69 +3.7 568,884 - Psyr_0513 0.70 +2.3 568,884 - Psyr_0513 0.70 +0.9 568,884 - Psyr_0513 0.70 +2.9 568,884 - Psyr_0513 0.70 -1.5 568,884 - Psyr_0513 0.70 -1.4 568,884 - Psyr_0513 0.70 -4.4 568,884 - Psyr_0513 0.70 +1.4 568,884 - Psyr_0513 0.70 -0.1 568,884 - Psyr_0513 0.70 -0.5 568,884 - Psyr_0513 0.70 +2.5 568,884 - Psyr_0513 0.70 -0.7 568,887 + Psyr_0513 0.70 -0.7 568,887 + Psyr_0513 0.70 +0.3 568,888 - Psyr_0513 0.70 +2.5 568,888 - Psyr_0513 0.70 -2.6 568,888 - Psyr_0513 0.70 +3.5 568,895 + Psyr_0513 0.71 +1.0 568,944 + Psyr_0513 0.78 +0.1 568,976 - Psyr_0513 0.82 +1.9 569,045 - +3.7 569,063 + -1.2 569,064 - -0.8 569,064 - +0.9 569,064 - -0.1 569,369 + Psyr_0514 0.13 +1.9 569,398 + Psyr_0514 0.15 +3.7 569,398 + Psyr_0514 0.15 -0.7 569,398 + Psyr_0514 0.15 +2.8 569,399 - Psyr_0514 0.15 +2.3 569,596 + Psyr_0514 0.24 -0.9 569,596 + Psyr_0514 0.24 +3.8 569,596 + Psyr_0514 0.24 -1.0 569,596 + Psyr_0514 0.24 +0.2 569,596 + Psyr_0514 0.24 +0.9 569,597 - Psyr_0514 0.24 +0.9 569,597 - Psyr_0514 0.24 +0.5 569,708 + Psyr_0514 0.29 -0.2 569,709 - Psyr_0514 0.29 -1.9 569,709 - Psyr_0514 0.29 -0.1 569,709 - Psyr_0514 0.29 +1.6 569,803 + Psyr_0514 0.33 -0.5 569,876 + Psyr_0514 0.36 -0.4
Or see this region's nucleotide sequence